Experiment: defined media with L-Serine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK53_RS13495 and LRK53_RS13500 are separated by 18 nucleotides LRK53_RS13500 and LRK53_RS13505 are separated by 51 nucleotides LRK53_RS13505 and LRK53_RS13510 overlap by 4 nucleotides
LRK53_RS13495: LRK53_RS13495 - pantoate--beta-alanine ligase, at 2,980,864 to 2,981,709
_RS13495
LRK53_RS13500: LRK53_RS13500 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 2,981,728 to 2,982,558
_RS13500
LRK53_RS13505: LRK53_RS13505 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase, at 2,982,610 to 2,983,089
_RS13505
LRK53_RS13510: LRK53_RS13510 - polynucleotide adenylyltransferase PcnB, at 2,983,086 to 2,984,432
_RS13510
Position (kb)
2982
2983
2984 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2981.699 kb on - strand at 2981.699 kb on - strand at 2981.699 kb on - strand at 2982.555 kb on - strand at 2982.555 kb on - strand at 2983.077 kb on - strand at 2983.951 kb on + strand, within LRK53_RS13510 at 2983.951 kb on + strand, within LRK53_RS13510 at 2983.952 kb on - strand, within LRK53_RS13510 at 2983.952 kb on - strand, within LRK53_RS13510 at 2983.952 kb on - strand, within LRK53_RS13510 at 2983.981 kb on + strand, within LRK53_RS13510 at 2983.981 kb on + strand, within LRK53_RS13510 at 2983.981 kb on + strand, within LRK53_RS13510 at 2983.981 kb on + strand, within LRK53_RS13510 at 2983.981 kb on + strand, within LRK53_RS13510 at 2983.981 kb on + strand, within LRK53_RS13510 at 2983.982 kb on - strand, within LRK53_RS13510 at 2983.982 kb on - strand, within LRK53_RS13510 at 2983.982 kb on - strand, within LRK53_RS13510 at 2983.982 kb on - strand, within LRK53_RS13510 at 2983.982 kb on - strand, within LRK53_RS13510 at 2983.982 kb on - strand, within LRK53_RS13510 at 2983.982 kb on - strand, within LRK53_RS13510 at 2983.982 kb on - strand, within LRK53_RS13510 at 2983.982 kb on - strand, within LRK53_RS13510 at 2983.982 kb on - strand, within LRK53_RS13510 at 2983.982 kb on - strand, within LRK53_RS13510 at 2983.982 kb on - strand, within LRK53_RS13510 at 2983.982 kb on - strand, within LRK53_RS13510 at 2983.982 kb on - strand, within LRK53_RS13510 at 2983.982 kb on - strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.984 kb on + strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510 at 2983.985 kb on - strand, within LRK53_RS13510
Per-strain Table
Position Strand Gene LocusTag Fraction defined media with L-Serine remove 2,981,699 - -1.1 2,981,699 - -0.7 2,981,699 - -0.1 2,982,555 - -1.0 2,982,555 - -2.9 2,983,077 - +0.9 2,983,951 + LRK53_RS13510 0.64 -0.1 2,983,951 + LRK53_RS13510 0.64 +0.9 2,983,952 - LRK53_RS13510 0.64 -1.1 2,983,952 - LRK53_RS13510 0.64 -2.3 2,983,952 - LRK53_RS13510 0.64 +0.9 2,983,981 + LRK53_RS13510 0.66 -0.1 2,983,981 + LRK53_RS13510 0.66 -0.1 2,983,981 + LRK53_RS13510 0.66 -0.1 2,983,981 + LRK53_RS13510 0.66 -0.7 2,983,981 + LRK53_RS13510 0.66 -1.7 2,983,981 + LRK53_RS13510 0.66 -0.7 2,983,982 - LRK53_RS13510 0.67 -0.8 2,983,982 - LRK53_RS13510 0.67 -0.1 2,983,982 - LRK53_RS13510 0.67 -1.3 2,983,982 - LRK53_RS13510 0.67 -2.7 2,983,982 - LRK53_RS13510 0.67 -3.9 2,983,982 - LRK53_RS13510 0.67 -1.0 2,983,982 - LRK53_RS13510 0.67 -0.1 2,983,982 - LRK53_RS13510 0.67 -0.7 2,983,982 - LRK53_RS13510 0.67 -0.1 2,983,982 - LRK53_RS13510 0.67 -0.7 2,983,982 - LRK53_RS13510 0.67 +0.3 2,983,982 - LRK53_RS13510 0.67 -1.9 2,983,982 - LRK53_RS13510 0.67 -1.0 2,983,982 - LRK53_RS13510 0.67 -1.1 2,983,982 - LRK53_RS13510 0.67 -0.7 2,983,984 + LRK53_RS13510 0.67 -2.1 2,983,984 + LRK53_RS13510 0.67 +0.9 2,983,984 + LRK53_RS13510 0.67 -0.1 2,983,984 + LRK53_RS13510 0.67 -1.7 2,983,984 + LRK53_RS13510 0.67 -0.1 2,983,984 + LRK53_RS13510 0.67 -1.5 2,983,984 + LRK53_RS13510 0.67 -3.2 2,983,984 + LRK53_RS13510 0.67 -1.7 2,983,984 + LRK53_RS13510 0.67 -0.7 2,983,984 + LRK53_RS13510 0.67 -1.4 2,983,984 + LRK53_RS13510 0.67 -0.1 2,983,984 + LRK53_RS13510 0.67 -0.7 2,983,984 + LRK53_RS13510 0.67 -1.1 2,983,984 + LRK53_RS13510 0.67 -0.7 2,983,984 + LRK53_RS13510 0.67 -1.1 2,983,984 + LRK53_RS13510 0.67 -1.1 2,983,984 + LRK53_RS13510 0.67 -1.1 2,983,984 + LRK53_RS13510 0.67 -1.9 2,983,984 + LRK53_RS13510 0.67 +0.9 2,983,984 + LRK53_RS13510 0.67 -2.3 2,983,984 + LRK53_RS13510 0.67 -0.7 2,983,984 + LRK53_RS13510 0.67 -0.1 2,983,984 + LRK53_RS13510 0.67 -1.9 2,983,984 + LRK53_RS13510 0.67 +0.9 2,983,984 + LRK53_RS13510 0.67 +0.5 2,983,984 + LRK53_RS13510 0.67 -0.7 2,983,984 + LRK53_RS13510 0.67 -2.1 2,983,984 + LRK53_RS13510 0.67 +0.9 2,983,985 - LRK53_RS13510 0.67 -0.1 2,983,985 - LRK53_RS13510 0.67 -0.1 2,983,985 - LRK53_RS13510 0.67 -1.2 2,983,985 - LRK53_RS13510 0.67 -0.4 2,983,985 - LRK53_RS13510 0.67 -1.5 2,983,985 - LRK53_RS13510 0.67 -1.3 2,983,985 - LRK53_RS13510 0.67 -3.1 2,983,985 - LRK53_RS13510 0.67 +1.3 2,983,985 - LRK53_RS13510 0.67 -0.1 2,983,985 - LRK53_RS13510 0.67 -0.2 2,983,985 - LRK53_RS13510 0.67 -0.7 2,983,985 - LRK53_RS13510 0.67 -2.1 2,983,985 - LRK53_RS13510 0.67 +0.9 2,983,985 - LRK53_RS13510 0.67 -0.7 2,983,985 - LRK53_RS13510 0.67 -0.1 2,983,985 - LRK53_RS13510 0.67 -1.4 2,983,985 - LRK53_RS13510 0.67 -0.9 2,983,985 - LRK53_RS13510 0.67 -0.1 2,983,985 - LRK53_RS13510 0.67 -1.4 2,983,985 - LRK53_RS13510 0.67 -1.7 2,983,985 - LRK53_RS13510 0.67 -3.1 2,983,985 - LRK53_RS13510 0.67 -0.1 2,983,985 - LRK53_RS13510 0.67 -0.5 2,983,985 - LRK53_RS13510 0.67 -1.7 2,983,985 - LRK53_RS13510 0.67 -1.7 2,983,985 - LRK53_RS13510 0.67 -1.3 2,983,985 - LRK53_RS13510 0.67 -0.3 2,983,985 - LRK53_RS13510 0.67 +0.5 2,983,985 - LRK53_RS13510 0.67 -1.5 2,983,985 - LRK53_RS13510 0.67 +0.9 2,983,985 - LRK53_RS13510 0.67 -1.6 2,983,985 - LRK53_RS13510 0.67 -1.4
Or see this region's nucleotide sequence