Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10380

Experiment: defined media with L-Serine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with L-Serine
2,324,399	-		LRK53_RS10370	0.83	+0.8
2,324,496	+				-1.5
2,324,497	-				-2.5
2,324,497	-				-0.0
2,324,497	-				+0.5
2,324,558	+				-1.1
2,324,558	+				-0.7
2,324,558	+				-0.8
2,324,558	+				+0.2
2,324,558	+				-0.4
2,324,559	-				-1.2
2,324,559	-				-1.2
2,324,559	-				-0.2
2,324,559	-				-1.4
2,324,559	-				-0.1
2,324,559	-				-1.4
2,324,559	-				-1.4
2,324,559	-				-0.4
2,324,559	-				-0.6
2,324,609	+				-0.8
2,324,609	+				-2.0
2,324,609	+				+1.8
2,324,609	+				-0.6
2,324,609	+				-1.2
2,324,609	+				-0.7
2,324,609	+				+1.8
2,324,609	+				-0.8
2,324,609	+				+2.1
2,324,609	+				+0.0
2,324,609	+				-1.4
2,324,610	-				-3.5
2,324,610	-				-1.5
2,324,610	-				-1.1
2,324,610	-				-1.5
2,324,610	-				-0.2
2,324,610	-				+2.4
2,324,610	-				-0.5
2,324,610	-				+1.1
2,324,654	+				-0.5
2,324,667	+				-2.2
2,324,668	-				-1.2
2,324,682	+				-0.0
2,324,682	+				-0.8
2,324,767	+				-0.9
2,324,768	-				-1.2
2,324,782	+				-0.6
2,324,782	+				+0.2
2,324,782	+				-0.2
2,324,782	+				-0.8
2,324,782	+				-0.2
2,324,783	-				-1.2
2,324,796	-				-0.2
2,324,796	-				-2.0
2,324,796	-				+1.4
2,324,849	+		LRK53_RS10375	0.12	-1.8
2,324,849	+		LRK53_RS10375	0.12	-2.2
2,324,849	+		LRK53_RS10375	0.12	+0.8
2,324,849	+		LRK53_RS10375	0.12	+1.4
2,324,849	+		LRK53_RS10375	0.12	-1.8
2,324,850	-		LRK53_RS10375	0.12	+0.8
2,324,850	-		LRK53_RS10375	0.12	+1.5
2,324,850	-		LRK53_RS10375	0.12	-0.8
2,324,850	-		LRK53_RS10375	0.12	-0.2
2,324,850	-		LRK53_RS10375	0.12	-1.5
2,324,850	-		LRK53_RS10375	0.12	-0.2
2,324,850	-		LRK53_RS10375	0.12	+0.2
2,324,850	-		LRK53_RS10375	0.12	-2.5
2,324,850	-		LRK53_RS10375	0.12	+1.8
2,324,909	+		LRK53_RS10375	0.26	-0.8
2,324,909	+		LRK53_RS10375	0.26	-0.4
2,324,909	+		LRK53_RS10375	0.26	-1.8
2,324,909	+		LRK53_RS10375	0.26	-0.8
2,324,909	+		LRK53_RS10375	0.26	-0.2
2,324,909	+		LRK53_RS10375	0.26	-0.2
2,324,909	+		LRK53_RS10375	0.26	-1.8
2,324,909	+		LRK53_RS10375	0.26	-0.4
2,324,909	+		LRK53_RS10375	0.26	-0.2
2,324,909	+		LRK53_RS10375	0.26	-1.5
2,324,909	+		LRK53_RS10375	0.26	+0.8
2,324,909	+		LRK53_RS10375	0.26	-0.5
2,324,910	-		LRK53_RS10375	0.26	-0.7
2,324,910	-		LRK53_RS10375	0.26	-0.6
2,324,910	-		LRK53_RS10375	0.26	-1.0
2,324,910	-		LRK53_RS10375	0.26	-0.6
2,324,910	-		LRK53_RS10375	0.26	-1.8
2,324,927	+		LRK53_RS10375	0.30	-2.1
2,324,927	+		LRK53_RS10375	0.30	+0.8
2,324,927	+		LRK53_RS10375	0.30	-0.2
2,324,927	+		LRK53_RS10375	0.30	-0.2
2,324,927	+		LRK53_RS10375	0.30	-1.2
2,324,927	+		LRK53_RS10375	0.30	-1.1
2,324,928	-		LRK53_RS10375	0.31	-1.2
2,324,928	-		LRK53_RS10375	0.31	+0.2
2,324,928	-		LRK53_RS10375	0.31	-0.2
2,324,928	-		LRK53_RS10375	0.31	+0.2
2,324,928	-		LRK53_RS10375	0.31	-0.2
2,324,996	+		LRK53_RS10375	0.47	-1.1
2,324,996	+		LRK53_RS10375	0.47	-2.0
2,324,996	+		LRK53_RS10375	0.47	-0.7
2,324,996	+		LRK53_RS10375	0.47	-1.2
2,324,996	+		LRK53_RS10375	0.47	-1.5
2,324,996	+		LRK53_RS10375	0.47	-0.8
2,324,996	+		LRK53_RS10375	0.47	-0.8
2,324,996	+		LRK53_RS10375	0.47	-0.9
2,324,996	+		LRK53_RS10375	0.47	+0.4
2,324,996	+		LRK53_RS10375	0.47	+0.8
2,324,997	-		LRK53_RS10375	0.47	+0.2
2,325,052	+		LRK53_RS10375	0.61	+1.4
2,325,119	+		LRK53_RS10375	0.77	-0.8
2,325,119	+		LRK53_RS10375	0.77	+1.8
2,325,119	+		LRK53_RS10375	0.77	-0.9
2,325,119	+		LRK53_RS10375	0.77	-1.2
2,325,119	+		LRK53_RS10375	0.77	+0.1
2,325,119	+		LRK53_RS10375	0.77	-1.5
2,325,119	+		LRK53_RS10375	0.77	-0.2
2,325,119	+		LRK53_RS10375	0.77	-2.8
2,325,119	+		LRK53_RS10375	0.77	-1.0
2,325,120	-		LRK53_RS10375	0.77	+0.8
2,325,120	-		LRK53_RS10375	0.77	+0.8
2,325,120	-		LRK53_RS10375	0.77	-1.2
2,325,120	-		LRK53_RS10375	0.77	+0.8
2,325,120	-		LRK53_RS10375	0.77	-0.8
2,325,120	-		LRK53_RS10375	0.77	+2.0
2,325,120	-		LRK53_RS10375	0.77	-2.0
2,325,120	-		LRK53_RS10375	0.77	-1.5
2,325,120	-		LRK53_RS10375	0.77	-1.1
2,325,133	+		LRK53_RS10375	0.80	-2.2
2,325,153	-		LRK53_RS10375	0.85	+0.8
2,325,153	-		LRK53_RS10375	0.85	-1.5
2,325,153	-		LRK53_RS10375	0.85	-1.0
2,325,153	-		LRK53_RS10375	0.85	-0.3
2,325,153	-		LRK53_RS10375	0.85	-0.4
2,325,153	-		LRK53_RS10375	0.85	-1.5
2,325,185	+				+0.4
2,325,186	-				-0.8
2,325,301	+				+0.8
2,325,301	+				-1.8
2,325,301	+				-1.5
2,325,301	+				-0.2
2,325,302	-				-0.8
2,325,302	-				-0.7
2,325,348	+				+0.8
2,325,348	+				-0.1
2,325,348	+				-1.2
2,325,348	+				+0.8
2,325,348	+				-1.1
2,325,372	+				-1.8
2,325,372	+				+0.8
2,325,372	+				-1.7
2,325,373	-				-0.2
2,325,373	-				+0.2
2,325,478	+		LRK53_RS10380	0.24	-1.4
2,325,493	+		LRK53_RS10380	0.27	-1.3
2,325,493	+		LRK53_RS10380	0.27	-2.2
2,325,493	+		LRK53_RS10380	0.27	-0.2
2,325,493	+		LRK53_RS10380	0.27	-0.7
2,325,494	-		LRK53_RS10380	0.27	+0.8
2,325,494	-		LRK53_RS10380	0.27	+0.8
2,325,494	-		LRK53_RS10380	0.27	+0.8
2,325,494	-		LRK53_RS10380	0.27	-1.5
2,325,494	-		LRK53_RS10380	0.27	-0.5
2,325,494	-		LRK53_RS10380	0.27	-2.5
2,325,607	+		LRK53_RS10380	0.49	-1.9
2,325,607	+		LRK53_RS10380	0.49	-0.8
2,325,721	+		LRK53_RS10380	0.71	-1.2
2,325,721	+		LRK53_RS10380	0.71	-0.3
2,325,721	+		LRK53_RS10380	0.71	-2.4
2,325,721	+		LRK53_RS10380	0.71	-1.1
2,325,721	+		LRK53_RS10380	0.71	-0.2
2,325,722	-		LRK53_RS10380	0.71	-0.8
2,325,763	+		LRK53_RS10380	0.79	-2.7
2,325,763	+		LRK53_RS10380	0.79	-0.7
2,325,763	+		LRK53_RS10380	0.79	-0.0
2,325,763	+		LRK53_RS10380	0.79	-1.2
2,325,763	+		LRK53_RS10380	0.79	-1.5
2,325,763	+		LRK53_RS10380	0.79	-0.2
2,325,763	+		LRK53_RS10380	0.79	+1.2
2,325,764	-		LRK53_RS10380	0.79	+2.4
2,325,784	+		LRK53_RS10380	0.83	-1.0
2,325,784	+		LRK53_RS10380	0.83	+0.8
2,325,784	+		LRK53_RS10380	0.83	-2.9
2,325,784	+		LRK53_RS10380	0.83	-1.4
2,325,784	+		LRK53_RS10380	0.83	-0.3
2,325,784	+		LRK53_RS10380	0.83	-0.2
2,325,784	+		LRK53_RS10380	0.83	-0.5
2,325,784	+		LRK53_RS10380	0.83	-0.2
2,325,784	+		LRK53_RS10380	0.83	-0.2
2,325,784	+		LRK53_RS10380	0.83	-0.2
2,325,784	+		LRK53_RS10380	0.83	-0.5
2,325,784	+		LRK53_RS10380	0.83	-1.0
2,325,784	+		LRK53_RS10380	0.83	+0.8
2,325,784	+		LRK53_RS10380	0.83	+0.8
2,325,784	+		LRK53_RS10380	0.83	+0.5
2,325,784	+		LRK53_RS10380	0.83	+0.8
2,325,784	+		LRK53_RS10380	0.83	-0.4
2,325,784	+		LRK53_RS10380	0.83	+0.8
2,325,785	-		LRK53_RS10380	0.83	+1.4
2,325,785	-		LRK53_RS10380	0.83	+0.8
2,325,785	-		LRK53_RS10380	0.83	-0.4
2,325,785	-		LRK53_RS10380	0.83	-2.2
2,325,785	-		LRK53_RS10380	0.83	+0.2
2,325,785	-		LRK53_RS10380	0.83	-1.1
2,325,785	-		LRK53_RS10380	0.83	+0.8
2,325,785	-		LRK53_RS10380	0.83	-1.1
2,325,785	-		LRK53_RS10380	0.83	-1.4
2,325,785	-		LRK53_RS10380	0.83	-0.8
2,325,785	-		LRK53_RS10380	0.83	-1.1
2,325,785	-		LRK53_RS10380	0.83	+1.4
2,325,785	-		LRK53_RS10380	0.83	-0.2
2,325,818	+		LRK53_RS10380	0.89	-1.8
2,325,818	+		LRK53_RS10380	0.89	+0.8
2,325,819	-		LRK53_RS10380	0.89	-0.5
2,325,819	-		LRK53_RS10380	0.89	-1.8
2,325,819	-		LRK53_RS10380	0.89	-1.5
2,325,819	-		LRK53_RS10380	0.89	-0.9
2,325,842	+				-0.1
2,325,871	+				+0.8
2,325,872	-				-0.2
2,325,872	-				-0.8
2,325,904	+				+0.2
2,325,904	+				-0.9
2,325,904	+				-0.2
2,325,904	+				-1.1
2,325,904	+				-0.8
2,325,904	+				+0.8
2,325,904	+				+0.8
2,325,905	-				-0.8
2,325,905	-				-0.5
2,325,905	-				+0.8
2,325,905	-				-0.8
2,325,905	-				+0.8
2,325,905	-				-1.4
2,325,917	+				-0.2
2,325,923	+				+0.4
2,325,923	+				-1.1
2,325,923	+				-0.0
2,325,923	+				-1.8
2,325,923	+				+0.2
2,325,923	+				+0.1
2,325,924	-				-1.2
2,325,924	-				-1.2
2,325,924	-				-0.2
2,325,924	-				-0.1
2,325,924	-				+1.1
2,325,924	-				+0.2
2,325,924	-				-0.4
2,325,924	-				-1.7
2,325,924	-				+0.2
2,325,924	-				+0.3
2,325,924	-				+0.8
2,325,924	-				-1.3
2,325,924	-				-0.6
2,325,949	-				-0.8
2,325,949	-				-0.0
2,325,949	-				-0.8
2,325,949	-				-0.8
2,325,949	-				-0.2
2,325,949	-				-1.0