Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS09845

Experiment: defined media with L-Serine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with L-Serine
2,210,027	+		LRK53_RS09840	0.20	+0.2
2,210,027	+		LRK53_RS09840	0.20	-0.2
2,210,027	+		LRK53_RS09840	0.20	+0.2
2,210,027	+		LRK53_RS09840	0.20	-0.8
2,210,027	+		LRK53_RS09840	0.20	-1.5
2,210,027	+		LRK53_RS09840	0.20	-0.6
2,210,027	+		LRK53_RS09840	0.20	-0.2
2,210,028	-		LRK53_RS09840	0.21	-1.3
2,210,028	-		LRK53_RS09840	0.21	+1.8
2,210,028	-		LRK53_RS09840	0.21	-1.2
2,210,028	-		LRK53_RS09840	0.21	-2.4
2,210,093	+		LRK53_RS09840	0.39	-1.4
2,210,093	+		LRK53_RS09840	0.39	+0.8
2,210,093	+		LRK53_RS09840	0.39	-1.0
2,210,093	+		LRK53_RS09840	0.39	-1.2
2,210,093	+		LRK53_RS09840	0.39	-2.0
2,210,093	+		LRK53_RS09840	0.39	+0.2
2,210,093	+		LRK53_RS09840	0.39	+1.8
2,210,093	+		LRK53_RS09840	0.39	-1.0
2,210,093	+		LRK53_RS09840	0.39	+0.8
2,210,093	+		LRK53_RS09840	0.39	+0.8
2,210,093	+		LRK53_RS09840	0.39	-0.0
2,210,093	+		LRK53_RS09840	0.39	-0.2
2,210,093	+		LRK53_RS09840	0.39	+0.5
2,210,093	+		LRK53_RS09840	0.39	-1.5
2,210,093	+		LRK53_RS09840	0.39	+0.4
2,210,093	+		LRK53_RS09840	0.39	-0.1
2,210,093	+		LRK53_RS09840	0.39	-0.4
2,210,093	+		LRK53_RS09840	0.39	-0.2
2,210,093	+		LRK53_RS09840	0.39	-0.2
2,210,093	+		LRK53_RS09840	0.39	-0.5
2,210,093	+		LRK53_RS09840	0.39	-0.8
2,210,093	+		LRK53_RS09840	0.39	-0.8
2,210,093	+		LRK53_RS09840	0.39	-0.4
2,210,093	+		LRK53_RS09840	0.39	-0.8
2,210,093	+		LRK53_RS09840	0.39	-2.7
2,210,093	+		LRK53_RS09840	0.39	-1.1
2,210,093	+		LRK53_RS09840	0.39	-0.8
2,210,093	+		LRK53_RS09840	0.39	+0.8
2,210,093	+		LRK53_RS09840	0.39	+0.8
2,210,093	+		LRK53_RS09840	0.39	-0.8
2,210,093	+		LRK53_RS09840	0.39	+0.1
2,210,093	+		LRK53_RS09840	0.39	-0.8
2,210,093	+		LRK53_RS09840	0.39	+1.4
2,210,094	-		LRK53_RS09840	0.39	-1.2
2,210,094	-		LRK53_RS09840	0.39	+0.8
2,210,094	-		LRK53_RS09840	0.39	-1.5
2,210,094	-		LRK53_RS09840	0.39	-1.2
2,210,094	-		LRK53_RS09840	0.39	-1.2
2,210,094	-		LRK53_RS09840	0.39	-1.0
2,210,094	-		LRK53_RS09840	0.39	-0.7
2,210,094	-		LRK53_RS09840	0.39	-1.1
2,210,094	-		LRK53_RS09840	0.39	+1.1
2,210,094	-		LRK53_RS09840	0.39	+0.5
2,210,094	-		LRK53_RS09840	0.39	-0.2
2,210,094	-		LRK53_RS09840	0.39	-2.1
2,210,094	-		LRK53_RS09840	0.39	+0.0
2,210,094	-		LRK53_RS09840	0.39	-0.2
2,210,094	-		LRK53_RS09840	0.39	-0.5
2,210,094	-		LRK53_RS09840	0.39	-0.2
2,210,094	-		LRK53_RS09840	0.39	-0.2
2,210,094	-		LRK53_RS09840	0.39	-1.5
2,210,094	-		LRK53_RS09840	0.39	-0.8
2,210,094	-		LRK53_RS09840	0.39	+0.0
2,210,094	-		LRK53_RS09840	0.39	-1.6
2,210,094	-		LRK53_RS09840	0.39	-0.8
2,210,094	-		LRK53_RS09840	0.39	-1.3
2,210,094	-		LRK53_RS09840	0.39	+0.5
2,210,094	-		LRK53_RS09840	0.39	-0.4
2,210,094	-		LRK53_RS09840	0.39	-1.0
2,210,094	-		LRK53_RS09840	0.39	+0.8
2,210,094	-		LRK53_RS09840	0.39	-0.9
2,210,094	-		LRK53_RS09840	0.39	-2.0
2,210,094	-		LRK53_RS09840	0.39	-1.6
2,210,136	+		LRK53_RS09840	0.50	-0.2
2,210,137	-		LRK53_RS09840	0.51	-0.0
2,210,150	-		LRK53_RS09840	0.54	-0.8
2,210,150	-		LRK53_RS09840	0.54	-2.5
2,210,150	-		LRK53_RS09840	0.54	-1.2
2,210,441	+				+0.6
2,210,441	+				-1.3
2,210,441	+				+0.8
2,210,441	+				-1.0
2,210,441	+				-0.1
2,210,441	+				-0.5
2,210,441	+				-0.1
2,210,441	+				+0.2
2,210,533	+				-2.4
2,210,578	+				-1.1
2,210,578	+				-0.6
2,210,578	+				-0.5
2,210,579	-				-0.5
2,210,579	-				+0.5
2,210,579	-				-0.8
2,210,594	-				-1.1
2,210,594	-				-0.8
2,210,594	-				-0.2
2,210,594	-				-0.8
2,210,621	+				-1.3
2,210,622	-				+0.8
2,210,622	-				-4.8
2,210,641	+				-1.0
2,210,641	+				-0.5
2,210,642	-				-1.5
2,210,642	-				-1.9
2,210,642	-				-1.0
2,210,816	+				-0.8
2,210,816	+				-0.8
2,210,817	-				+0.8
2,210,817	-				+1.8
2,210,817	-				-0.2
2,210,817	-				-1.8
2,210,817	-				-2.2
2,210,817	-				-1.5
2,210,817	-				-0.2
2,210,833	+				-2.0
2,210,833	+				-1.5
2,210,833	+				+0.2
2,210,833	+				-0.2
2,210,833	+				-0.8
2,210,833	+				-1.2
2,210,833	+				-1.2
2,210,833	+				+0.8
2,210,833	+				-1.1
2,210,833	+				-0.0
2,210,833	+				-1.5
2,210,834	-				-1.2
2,210,834	-				+0.8
2,210,834	-				-2.0
2,210,834	-				-3.8
2,210,834	-				-2.6
2,210,834	-				-2.8
2,210,834	-				+1.4
2,210,952	+				-2.0
2,210,953	-				-0.2
2,210,953	-				-3.0
2,210,953	-				-3.1
2,211,074	+		LRK53_RS09845	0.14	-0.8
2,211,074	+		LRK53_RS09845	0.14	+0.8
2,211,074	+		LRK53_RS09845	0.14	-2.2
2,211,074	+		LRK53_RS09845	0.14	-2.2
2,211,074	+		LRK53_RS09845	0.14	-2.5
2,211,074	+		LRK53_RS09845	0.14	-1.5
2,211,074	+		LRK53_RS09845	0.14	+0.2
2,211,074	+		LRK53_RS09845	0.14	-0.8
2,211,074	+		LRK53_RS09845	0.14	-0.8
2,211,074	+		LRK53_RS09845	0.14	-2.2
2,211,074	+		LRK53_RS09845	0.14	-0.2
2,211,074	+		LRK53_RS09845	0.14	-1.5
2,211,074	+		LRK53_RS09845	0.14	-2.5
2,211,074	+		LRK53_RS09845	0.14	-1.2
2,211,074	+		LRK53_RS09845	0.14	-3.4
2,211,075	-		LRK53_RS09845	0.14	-2.2
2,211,075	-		LRK53_RS09845	0.14	-0.8
2,211,075	-		LRK53_RS09845	0.14	-1.2
2,211,075	-		LRK53_RS09845	0.14	-2.1
2,211,075	-		LRK53_RS09845	0.14	-0.2
2,211,075	-		LRK53_RS09845	0.14	-1.5
2,211,075	-		LRK53_RS09845	0.14	-2.7
2,211,075	-		LRK53_RS09845	0.14	-0.8
2,211,075	-		LRK53_RS09845	0.14	-1.5
2,211,107	+		LRK53_RS09845	0.16	-1.8
2,211,108	-		LRK53_RS09845	0.16	+0.8
2,211,153	-		LRK53_RS09845	0.19	-2.9
2,211,233	+		LRK53_RS09845	0.24	-0.2
2,211,234	-		LRK53_RS09845	0.24	-1.2
2,211,272	+		LRK53_RS09845	0.26	-1.8
2,211,273	-		LRK53_RS09845	0.26	-2.4
2,211,273	-		LRK53_RS09845	0.26	-1.2
2,211,273	-		LRK53_RS09845	0.26	-3.6
2,211,374	+		LRK53_RS09845	0.32	-1.5
2,211,374	+		LRK53_RS09845	0.32	-4.5
2,211,374	+		LRK53_RS09845	0.32	-3.9
2,211,374	+		LRK53_RS09845	0.32	-4.7
2,211,374	+		LRK53_RS09845	0.32	-4.0
2,211,375	-		LRK53_RS09845	0.32	-0.2
2,211,375	-		LRK53_RS09845	0.32	-4.3
2,211,404	+		LRK53_RS09845	0.34	-1.5
2,211,404	+		LRK53_RS09845	0.34	-2.7
2,211,404	+		LRK53_RS09845	0.34	-1.2
2,211,405	-		LRK53_RS09845	0.34	-1.5
2,211,405	-		LRK53_RS09845	0.34	-1.8
2,211,407	+		LRK53_RS09845	0.34	+0.8
2,211,408	-		LRK53_RS09845	0.34	-3.5
2,211,408	-		LRK53_RS09845	0.34	-0.2
2,211,428	+		LRK53_RS09845	0.36	-1.2
2,211,429	-		LRK53_RS09845	0.36	-3.3
2,211,714	+		LRK53_RS09845	0.53	-1.2
2,211,714	+		LRK53_RS09845	0.53	-0.8
2,211,714	+		LRK53_RS09845	0.53	-1.5
2,211,714	+		LRK53_RS09845	0.53	-1.2
2,211,714	+		LRK53_RS09845	0.53	-1.2
2,211,715	-		LRK53_RS09845	0.53	-3.4
2,211,715	-		LRK53_RS09845	0.53	-2.9
2,211,715	-		LRK53_RS09845	0.53	-1.4
2,211,715	-		LRK53_RS09845	0.53	-2.4
2,211,715	-		LRK53_RS09845	0.53	-1.4
2,211,715	-		LRK53_RS09845	0.53	-2.7
2,211,715	-		LRK53_RS09845	0.53	-3.1
2,211,715	-		LRK53_RS09845	0.53	-1.8
2,211,715	-		LRK53_RS09845	0.53	-2.0
2,211,715	-		LRK53_RS09845	0.53	+0.8
2,211,731	+		LRK53_RS09845	0.54	-3.3
2,211,731	+		LRK53_RS09845	0.54	-3.5
2,211,731	+		LRK53_RS09845	0.54	-4.4
2,211,731	+		LRK53_RS09845	0.54	-0.8
2,211,732	-		LRK53_RS09845	0.54	-1.2
2,211,732	-		LRK53_RS09845	0.54	+2.4
2,211,732	-		LRK53_RS09845	0.54	-2.7
2,211,732	-		LRK53_RS09845	0.54	-1.7
2,211,732	-		LRK53_RS09845	0.54	-2.0
2,211,732	-		LRK53_RS09845	0.54	-0.8
2,211,732	-		LRK53_RS09845	0.54	-0.2
2,211,733	+		LRK53_RS09845	0.54	-1.5
2,211,733	+		LRK53_RS09845	0.54	-2.7
2,211,733	+		LRK53_RS09845	0.54	-2.0
2,211,733	+		LRK53_RS09845	0.54	-1.8
2,211,733	+		LRK53_RS09845	0.54	+0.8
2,211,733	+		LRK53_RS09845	0.54	-0.8
2,211,733	+		LRK53_RS09845	0.54	-4.0
2,211,733	+		LRK53_RS09845	0.54	-2.5
2,211,733	+		LRK53_RS09845	0.54	-1.2
2,211,734	-		LRK53_RS09845	0.54	-3.3
2,211,734	-		LRK53_RS09845	0.54	-5.7
2,211,734	-		LRK53_RS09845	0.54	-1.2
2,211,734	-		LRK53_RS09845	0.54	-2.8
2,211,734	-		LRK53_RS09845	0.54	-3.1
2,211,734	-		LRK53_RS09845	0.54	-4.1
2,211,734	-		LRK53_RS09845	0.54	-2.0
2,211,734	-		LRK53_RS09845	0.54	-2.8
2,211,734	-		LRK53_RS09845	0.54	-0.8
2,211,734	-		LRK53_RS09845	0.54	-1.8
2,211,734	-		LRK53_RS09845	0.54	-4.3
2,211,734	-		LRK53_RS09845	0.54	-0.8
2,211,734	-		LRK53_RS09845	0.54	-0.2
2,211,788	+		LRK53_RS09845	0.57	-1.2
2,211,788	+		LRK53_RS09845	0.57	-1.8
2,211,788	+		LRK53_RS09845	0.57	-1.2
2,211,788	+		LRK53_RS09845	0.57	-0.8
2,211,789	-		LRK53_RS09845	0.57	-4.1
2,211,789	-		LRK53_RS09845	0.57	-0.8
2,211,789	-		LRK53_RS09845	0.57	-1.2
2,211,824	+		LRK53_RS09845	0.59	-3.7
2,211,824	+		LRK53_RS09845	0.59	-2.4
2,211,825	-		LRK53_RS09845	0.59	+0.8
2,211,825	-		LRK53_RS09845	0.59	-0.2
2,211,825	-		LRK53_RS09845	0.59	-1.5
2,211,825	-		LRK53_RS09845	0.59	-2.7
2,211,825	-		LRK53_RS09845	0.59	-2.7
2,211,825	-		LRK53_RS09845	0.59	-2.7
2,211,911	+		LRK53_RS09845	0.65	-2.5
2,211,911	+		LRK53_RS09845	0.65	-2.7
2,211,911	+		LRK53_RS09845	0.65	-3.0
2,211,911	+		LRK53_RS09845	0.65	-0.2
2,211,911	+		LRK53_RS09845	0.65	-0.8
2,211,911	+		LRK53_RS09845	0.65	+0.8
2,211,912	-		LRK53_RS09845	0.65	-2.6
2,211,912	-		LRK53_RS09845	0.65	-4.1
2,211,912	-		LRK53_RS09845	0.65	-0.8
2,211,912	-		LRK53_RS09845	0.65	-3.2
2,211,912	-		LRK53_RS09845	0.65	-1.2
2,211,912	-		LRK53_RS09845	0.65	-2.2
2,211,912	-		LRK53_RS09845	0.65	-1.5
2,211,912	-		LRK53_RS09845	0.65	+0.8
2,211,983	+		LRK53_RS09845	0.69	-3.5
2,211,983	+		LRK53_RS09845	0.69	-1.5
2,211,983	+		LRK53_RS09845	0.69	-1.5
2,211,983	+		LRK53_RS09845	0.69	-3.0
2,211,983	+		LRK53_RS09845	0.69	-2.9
2,211,983	+		LRK53_RS09845	0.69	-0.2
2,211,984	-		LRK53_RS09845	0.69	-2.2
2,211,984	-		LRK53_RS09845	0.69	-0.8
2,211,984	-		LRK53_RS09845	0.69	-1.8
2,211,984	-		LRK53_RS09845	0.69	-3.5
2,211,984	-		LRK53_RS09845	0.69	-3.5
2,211,984	-		LRK53_RS09845	0.69	-1.5
2,212,192	+		LRK53_RS09845	0.81	+0.2
2,212,208	+		LRK53_RS09845	0.82	-2.5
2,212,208	+		LRK53_RS09845	0.82	-2.2
2,212,208	+		LRK53_RS09845	0.82	-3.6
2,212,209	-		LRK53_RS09845	0.82	+0.8
2,212,209	-		LRK53_RS09845	0.82	-3.7
2,212,209	-		LRK53_RS09845	0.82	-1.8
2,212,319	+		LRK53_RS09845	0.89	-0.2
2,212,319	+		LRK53_RS09845	0.89	-2.2
2,212,319	+		LRK53_RS09845	0.89	-4.2
2,212,320	-		LRK53_RS09845	0.89	-0.8
2,212,320	-		LRK53_RS09845	0.89	-2.5
2,212,320	-		LRK53_RS09845	0.89	-2.8
2,212,320	-		LRK53_RS09845	0.89	-0.5
2,212,320	-		LRK53_RS09845	0.89	-3.9
2,212,320	-		LRK53_RS09845	0.89	-3.9
2,212,320	-		LRK53_RS09845	0.89	-2.7
2,212,320	-		LRK53_RS09845	0.89	-0.2
2,212,320	-		LRK53_RS09845	0.89	-3.6
2,212,320	-		LRK53_RS09845	0.89	-1.5
2,212,584	+				+0.6
2,212,584	+				-2.2
2,212,584	+				-0.8
2,212,584	+				-0.5
2,212,585	-				+0.4
2,212,585	-				-1.8
2,212,585	-				+0.8
2,212,619	+				-0.8
2,212,619	+				-0.7
2,212,619	+				+0.4
2,212,619	+				-1.3
2,212,620	-				+0.8
2,212,620	-				-0.2