Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08505

Experiment: defined media with L-Serine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with L-Serine
1,908,079	+		LRK53_RS08495	0.80	-0.7
1,908,079	+		LRK53_RS08495	0.80	-0.2
1,908,079	+		LRK53_RS08495	0.80	+0.3
1,908,079	+		LRK53_RS08495	0.80	-1.1
1,908,079	+		LRK53_RS08495	0.80	-0.1
1,908,079	+		LRK53_RS08495	0.80	-0.2
1,908,080	-		LRK53_RS08495	0.80	-0.8
1,908,080	-		LRK53_RS08495	0.80	+0.0
1,908,080	-		LRK53_RS08495	0.80	-1.6
1,908,080	-		LRK53_RS08495	0.80	-0.8
1,908,080	-		LRK53_RS08495	0.80	-1.2
1,908,080	-		LRK53_RS08495	0.80	-0.6
1,908,080	-		LRK53_RS08495	0.80	-0.7
1,908,275	+				-0.6
1,908,275	+				-0.8
1,908,275	+				+0.3
1,908,275	+				-0.6
1,908,275	+				+0.8
1,908,275	+				-0.7
1,908,276	-				+0.8
1,908,276	-				+1.8
1,908,276	-				-1.9
1,908,276	-				+1.8
1,908,276	-				-1.0
1,908,276	-				-0.6
1,908,276	-				-0.9
1,908,276	-				-0.7
1,908,276	-				-2.2
1,908,276	-				-0.4
1,908,276	-				-0.2
1,908,276	-				-0.2
1,909,039	+				-0.8
1,909,039	+				+0.8
1,909,039	+				-0.2
1,909,039	+				+0.2
1,909,040	-				-2.4
1,909,040	-				-0.2
1,909,040	-				-1.6
1,909,040	-				+0.8
1,909,040	-				-0.2
1,909,040	-				-2.9
1,909,040	-				+0.8
1,909,141	+		LRK53_RS08505	0.19	-4.2
1,909,141	+		LRK53_RS08505	0.19	+0.8
1,909,141	+		LRK53_RS08505	0.19	-0.2
1,909,142	-		LRK53_RS08505	0.19	+0.8
1,909,142	-		LRK53_RS08505	0.19	-0.8
1,909,142	-		LRK53_RS08505	0.19	-1.7
1,909,223	-		LRK53_RS08505	0.34	-2.7
1,909,223	-		LRK53_RS08505	0.34	-1.6
1,909,223	-		LRK53_RS08505	0.34	+0.8
1,909,223	-		LRK53_RS08505	0.34	-1.2
1,909,223	-		LRK53_RS08505	0.34	-2.0
1,909,223	-		LRK53_RS08505	0.34	-2.4
1,909,379	-		LRK53_RS08505	0.62	-3.1
1,909,575	-				-0.8
1,909,575	-				-1.6
1,909,575	-				-0.9
1,909,575	-				-2.4
1,909,575	-				-3.3
1,909,575	-				-0.9
1,909,575	-				-0.8
1,909,686	+		LRK53_RS08510	0.15	-0.6
1,909,686	+		LRK53_RS08510	0.15	-0.2
1,909,686	+		LRK53_RS08510	0.15	-2.0
1,909,686	+		LRK53_RS08510	0.15	-1.8
1,909,686	+		LRK53_RS08510	0.15	-0.8
1,909,686	+		LRK53_RS08510	0.15	-0.8
1,909,686	+		LRK53_RS08510	0.15	-2.2
1,909,686	+		LRK53_RS08510	0.15	-1.3
1,909,686	+		LRK53_RS08510	0.15	-1.8
1,909,686	+		LRK53_RS08510	0.15	-0.7
1,909,686	+		LRK53_RS08510	0.15	-0.8
1,909,686	+		LRK53_RS08510	0.15	+0.8
1,909,686	+		LRK53_RS08510	0.15	-0.6
1,909,686	+		LRK53_RS08510	0.15	-0.8
1,909,686	+		LRK53_RS08510	0.15	-1.6
1,909,686	+		LRK53_RS08510	0.15	-2.8
1,909,686	+		LRK53_RS08510	0.15	-1.6
1,909,687	-		LRK53_RS08510	0.16	-1.9
1,909,687	-		LRK53_RS08510	0.16	-2.7
1,909,687	-		LRK53_RS08510	0.16	-0.2
1,909,687	-		LRK53_RS08510	0.16	-0.8
1,909,687	-		LRK53_RS08510	0.16	-1.9
1,909,687	-		LRK53_RS08510	0.16	-0.8
1,909,687	-		LRK53_RS08510	0.16	-1.6
1,909,687	-		LRK53_RS08510	0.16	-0.6
1,909,687	-		LRK53_RS08510	0.16	-0.6
1,909,687	-		LRK53_RS08510	0.16	-2.1
1,909,687	-		LRK53_RS08510	0.16	-2.2
1,909,687	-		LRK53_RS08510	0.16	-1.1
1,909,687	-		LRK53_RS08510	0.16	+0.3
1,909,687	-		LRK53_RS08510	0.16	-2.2
1,909,687	-		LRK53_RS08510	0.16	-2.4
1,909,687	-		LRK53_RS08510	0.16	-1.0
1,909,687	-		LRK53_RS08510	0.16	+0.8
1,909,687	-		LRK53_RS08510	0.16	-2.7
1,909,687	-		LRK53_RS08510	0.16	-1.7
1,909,687	-		LRK53_RS08510	0.16	-1.9
1,909,687	-		LRK53_RS08510	0.16	-0.2
1,909,687	-		LRK53_RS08510	0.16	-0.2
1,909,687	-		LRK53_RS08510	0.16	+0.8
1,909,710	+		LRK53_RS08510	0.19	-0.8
1,909,710	+		LRK53_RS08510	0.19	-2.0
1,909,710	+		LRK53_RS08510	0.19	-2.0
1,909,710	+		LRK53_RS08510	0.19	+0.8
1,909,710	+		LRK53_RS08510	0.19	+0.8
1,909,710	+		LRK53_RS08510	0.19	-2.3
1,909,711	-		LRK53_RS08510	0.19	-1.8
1,909,711	-		LRK53_RS08510	0.19	-0.8
1,909,711	-		LRK53_RS08510	0.19	-2.2
1,909,711	-		LRK53_RS08510	0.19	+0.0
1,909,711	-		LRK53_RS08510	0.19	-2.2
1,909,711	-		LRK53_RS08510	0.19	-2.0
1,909,825	-		LRK53_RS08510	0.37	-2.4
1,909,956	+		LRK53_RS08510	0.57	-0.8
1,909,956	+		LRK53_RS08510	0.57	-0.2
1,909,956	+		LRK53_RS08510	0.57	-1.9
1,909,956	+		LRK53_RS08510	0.57	-0.7
1,909,957	-		LRK53_RS08510	0.57	-2.2
1,909,957	-		LRK53_RS08510	0.57	-2.8
1,909,957	-		LRK53_RS08510	0.57	-0.8
1,909,957	-		LRK53_RS08510	0.57	+0.4
1,909,957	-		LRK53_RS08510	0.57	-1.6
1,909,957	-		LRK53_RS08510	0.57	-1.9
1,909,957	-		LRK53_RS08510	0.57	-1.8
1,909,957	-		LRK53_RS08510	0.57	+0.8
1,909,957	-		LRK53_RS08510	0.57	-0.6
1,910,266	+				-1.8
1,910,266	+				-2.0
1,910,266	+				-1.2
1,910,266	+				-1.2
1,910,266	+				-1.0
1,910,266	+				-1.4
1,910,266	+				+0.2
1,910,267	-				+0.8
1,910,267	-				-1.2
1,910,267	-				-1.2
1,910,267	-				+0.2
1,910,267	-				+0.8
1,910,267	-				-1.5
1,910,267	-				-0.0
1,910,267	-				-0.7
1,910,268	+				-0.8
1,910,268	+				+1.8
1,910,268	+				+0.2
1,910,268	+				-0.4
1,910,268	+				-0.2
1,910,268	+				-0.7
1,910,268	+				+1.8
1,910,268	+				-0.7
1,910,268	+				-1.6
1,910,268	+				-0.5
1,910,268	+				-0.2
1,910,268	+				+0.2
1,910,268	+				-1.8
1,910,268	+				-0.4
1,910,268	+				-0.2
1,910,269	-				-0.8
1,910,269	-				+1.3
1,910,269	-				-0.5
1,910,269	-				-0.1
1,910,269	-				-0.5
1,910,296	+				-0.6
1,910,297	-				-0.1
1,910,343	+				-0.2
1,910,343	+				-1.8
1,910,343	+				+0.2
1,910,344	-				-0.8
1,910,344	-				+0.3
1,910,419	+				+0.4
1,910,419	+				-0.5
1,910,419	+				-1.8
1,910,420	-				-0.2
1,910,420	-				-0.6
1,910,420	-				-0.8
1,910,420	-				+0.8
1,910,561	+		LRK53_RS08515	0.48	-1.4
1,910,561	+		LRK53_RS08515	0.48	+0.2
1,910,562	-		LRK53_RS08515	0.48	-0.2
1,910,562	-		LRK53_RS08515	0.48	+0.8
1,910,562	-		LRK53_RS08515	0.48	-0.7