Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS07560

Experiment: defined media with L-Serine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with L-Serine
1,688,705	+		LRK53_RS07555	0.46	-2.2
1,688,705	+		LRK53_RS07555	0.46	-0.8
1,688,705	+		LRK53_RS07555	0.46	-1.8
1,688,706	-		LRK53_RS07555	0.46	-2.6
1,688,706	-		LRK53_RS07555	0.46	-3.1
1,688,706	-		LRK53_RS07555	0.46	-1.5
1,688,706	-		LRK53_RS07555	0.46	-3.8
1,688,706	-		LRK53_RS07555	0.46	-1.8
1,688,706	-		LRK53_RS07555	0.46	-2.2
1,689,062	+		LRK53_RS07555	0.73	-0.2
1,689,062	+		LRK53_RS07555	0.73	-4.5
1,689,063	-		LRK53_RS07555	0.73	-3.8
1,689,063	-		LRK53_RS07555	0.73	-0.8
1,689,063	-		LRK53_RS07555	0.73	-3.5
1,689,063	-		LRK53_RS07555	0.73	-0.2
1,689,063	-		LRK53_RS07555	0.73	-2.2
1,689,092	+		LRK53_RS07555	0.76	-2.0
1,689,092	+		LRK53_RS07555	0.76	-2.0
1,689,092	+		LRK53_RS07555	0.76	-3.6
1,689,092	+		LRK53_RS07555	0.76	-0.8
1,689,092	+		LRK53_RS07555	0.76	-4.2
1,689,092	+		LRK53_RS07555	0.76	-0.8
1,689,092	+		LRK53_RS07555	0.76	-3.9
1,689,092	+		LRK53_RS07555	0.76	-0.2
1,689,092	+		LRK53_RS07555	0.76	-0.8
1,689,092	+		LRK53_RS07555	0.76	-3.8
1,689,092	+		LRK53_RS07555	0.76	-1.2
1,689,092	+		LRK53_RS07555	0.76	-3.3
1,689,092	+		LRK53_RS07555	0.76	+0.8
1,689,093	-		LRK53_RS07555	0.76	-0.2
1,689,093	-		LRK53_RS07555	0.76	-2.9
1,689,093	-		LRK53_RS07555	0.76	-4.0
1,689,093	-		LRK53_RS07555	0.76	-1.5
1,689,093	-		LRK53_RS07555	0.76	-0.8
1,689,093	-		LRK53_RS07555	0.76	-1.8
1,689,093	-		LRK53_RS07555	0.76	-1.2
1,689,093	-		LRK53_RS07555	0.76	-3.9
1,689,093	-		LRK53_RS07555	0.76	-1.2
1,689,093	-		LRK53_RS07555	0.76	-1.5
1,689,093	-		LRK53_RS07555	0.76	-4.2
1,689,093	-		LRK53_RS07555	0.76	-0.8
1,689,093	-		LRK53_RS07555	0.76	-1.5
1,689,093	-		LRK53_RS07555	0.76	-1.2
1,689,107	+		LRK53_RS07555	0.77	-1.2
1,689,107	+		LRK53_RS07555	0.77	-1.2
1,689,107	+		LRK53_RS07555	0.77	+0.8
1,689,107	+		LRK53_RS07555	0.77	-2.3
1,689,107	+		LRK53_RS07555	0.77	-1.2
1,689,107	+		LRK53_RS07555	0.77	-0.2
1,689,107	+		LRK53_RS07555	0.77	-3.8
1,689,107	+		LRK53_RS07555	0.77	-1.8
1,689,107	+		LRK53_RS07555	0.77	+0.8
1,689,107	+		LRK53_RS07555	0.77	-4.2
1,689,107	+		LRK53_RS07555	0.77	-1.5
1,689,108	-		LRK53_RS07555	0.77	-0.8
1,689,108	-		LRK53_RS07555	0.77	+0.8
1,689,108	-		LRK53_RS07555	0.77	-2.6
1,689,108	-		LRK53_RS07555	0.77	-1.2
1,689,108	-		LRK53_RS07555	0.77	-2.2
1,689,108	-		LRK53_RS07555	0.77	-0.8
1,689,108	-		LRK53_RS07555	0.77	-1.5
1,689,108	-		LRK53_RS07555	0.77	-2.6
1,689,108	-		LRK53_RS07555	0.77	-2.2
1,689,108	-		LRK53_RS07555	0.77	-1.8
1,689,108	-		LRK53_RS07555	0.77	-0.8
1,689,149	+		LRK53_RS07555	0.80	-3.6
1,689,150	-		LRK53_RS07555	0.80	-1.2
1,689,150	-		LRK53_RS07555	0.80	-0.2
1,689,150	-		LRK53_RS07555	0.80	-1.8
1,689,150	-		LRK53_RS07555	0.80	-1.2
1,689,274	+		LRK53_RS07555	0.89	-5.4
1,689,274	+		LRK53_RS07555	0.89	-2.0
1,689,274	+		LRK53_RS07555	0.89	-3.3
1,689,274	+		LRK53_RS07555	0.89	-1.8
1,689,274	+		LRK53_RS07555	0.89	-2.9
1,689,274	+		LRK53_RS07555	0.89	-1.2
1,689,274	+		LRK53_RS07555	0.89	-4.4
1,689,274	+		LRK53_RS07555	0.89	-1.5
1,689,275	-		LRK53_RS07555	0.89	-3.9
1,689,275	-		LRK53_RS07555	0.89	-2.0
1,689,275	-		LRK53_RS07555	0.89	-1.8
1,689,275	-		LRK53_RS07555	0.89	-4.5
1,689,275	-		LRK53_RS07555	0.89	-2.0
1,689,275	-		LRK53_RS07555	0.89	-3.5
1,689,275	-		LRK53_RS07555	0.89	+0.8
1,689,275	-		LRK53_RS07555	0.89	+0.8
1,689,275	-		LRK53_RS07555	0.89	-2.3
1,689,275	-		LRK53_RS07555	0.89	-0.2
1,689,275	-		LRK53_RS07555	0.89	-2.1
1,689,275	-		LRK53_RS07555	0.89	-4.0
1,689,275	-		LRK53_RS07555	0.89	-4.7
1,689,275	-		LRK53_RS07555	0.89	-1.8
1,689,281	+		LRK53_RS07555	0.90	-2.2
1,689,281	+		LRK53_RS07555	0.90	-1.5
1,689,281	+		LRK53_RS07555	0.90	-0.2
1,689,281	+		LRK53_RS07555	0.90	-0.8
1,689,281	+		LRK53_RS07555	0.90	-0.8
1,689,282	-		LRK53_RS07555	0.90	-3.1
1,689,282	-		LRK53_RS07555	0.90	-0.2
1,689,282	-		LRK53_RS07555	0.90	-2.0
1,689,282	-		LRK53_RS07555	0.90	-0.8
1,689,282	-		LRK53_RS07555	0.90	-2.0
1,689,282	-		LRK53_RS07555	0.90	-2.0
1,689,282	-		LRK53_RS07555	0.90	-2.3
1,689,282	-		LRK53_RS07555	0.90	-2.5
1,689,282	-		LRK53_RS07555	0.90	-0.8
1,689,284	+				-2.2
1,689,284	+				-1.5
1,689,284	+				-0.2
1,689,284	+				-1.5
1,689,284	+				-1.8
1,689,284	+				-2.0
1,689,285	-				-3.4
1,689,285	-				-1.5
1,689,285	-				-2.6
1,689,285	-				+1.8
1,689,420	+				-0.2
1,689,420	+				-0.2
1,689,420	+				-1.1
1,689,420	+				-1.4
1,689,421	-				-2.2
1,689,421	-				-0.2
1,689,421	-				-3.0
1,689,422	+				-1.2
1,689,422	+				-0.8
1,689,422	+				-2.1
1,689,423	-				-0.8
1,689,423	-				-0.7
1,689,423	-				-0.9
1,689,423	-				-0.8
1,689,423	-				-2.5
1,689,423	-				+0.1
1,689,494	+				+2.4
1,689,494	+				+0.3
1,689,494	+				-0.0
1,689,494	+				-1.0
1,689,816	+		LRK53_RS07560	0.27	-3.8
1,689,817	-		LRK53_RS07560	0.27	-3.9
1,689,817	-		LRK53_RS07560	0.27	-1.5
1,689,817	-		LRK53_RS07560	0.27	-3.3
1,689,876	+		LRK53_RS07560	0.33	-0.2
1,689,876	+		LRK53_RS07560	0.33	-1.9
1,689,877	-		LRK53_RS07560	0.33	-2.2
1,689,877	-		LRK53_RS07560	0.33	-1.2
1,689,877	-		LRK53_RS07560	0.33	-5.0
1,689,897	+		LRK53_RS07560	0.36	-0.8
1,689,897	+		LRK53_RS07560	0.36	-3.3
1,689,897	+		LRK53_RS07560	0.36	-0.2
1,689,897	+		LRK53_RS07560	0.36	-0.8
1,689,897	+		LRK53_RS07560	0.36	-2.9
1,689,897	+		LRK53_RS07560	0.36	-1.2
1,689,897	+		LRK53_RS07560	0.36	-1.5
1,689,897	+		LRK53_RS07560	0.36	-3.6
1,689,897	+		LRK53_RS07560	0.36	-2.9
1,689,897	+		LRK53_RS07560	0.36	-5.0
1,689,897	+		LRK53_RS07560	0.36	-1.9
1,689,898	-		LRK53_RS07560	0.36	-0.8
1,689,898	-		LRK53_RS07560	0.36	-2.5
1,689,898	-		LRK53_RS07560	0.36	-3.6
1,689,900	+		LRK53_RS07560	0.36	-0.8
1,689,900	+		LRK53_RS07560	0.36	-0.2
1,689,900	+		LRK53_RS07560	0.36	-1.8
1,689,900	+		LRK53_RS07560	0.36	-0.8
1,689,900	+		LRK53_RS07560	0.36	-2.3
1,689,900	+		LRK53_RS07560	0.36	-2.3
1,689,901	-		LRK53_RS07560	0.36	-2.5
1,689,901	-		LRK53_RS07560	0.36	-1.5
1,689,901	-		LRK53_RS07560	0.36	-2.1
1,689,901	-		LRK53_RS07560	0.36	-1.2
1,689,901	-		LRK53_RS07560	0.36	+0.8
1,689,901	-		LRK53_RS07560	0.36	-3.2
1,689,966	+		LRK53_RS07560	0.43	-1.8
1,689,967	-		LRK53_RS07560	0.43	-1.2
1,689,967	-		LRK53_RS07560	0.43	-2.2
1,690,116	+		LRK53_RS07560	0.58	+0.8
1,690,116	+		LRK53_RS07560	0.58	-3.8
1,690,117	-		LRK53_RS07560	0.59	-1.8
1,690,233	+		LRK53_RS07560	0.71	-2.2
1,690,233	+		LRK53_RS07560	0.71	-2.3
1,690,233	+		LRK53_RS07560	0.71	-2.0
1,690,233	+		LRK53_RS07560	0.71	-0.8
1,690,233	+		LRK53_RS07560	0.71	-3.4
1,690,233	+		LRK53_RS07560	0.71	-1.2
1,690,233	+		LRK53_RS07560	0.71	-1.8
1,690,233	+		LRK53_RS07560	0.71	-1.5
1,690,234	-		LRK53_RS07560	0.71	-2.0
1,690,234	-		LRK53_RS07560	0.71	-2.2
1,690,234	-		LRK53_RS07560	0.71	-0.2
1,690,234	-		LRK53_RS07560	0.71	-1.5
1,690,234	-		LRK53_RS07560	0.71	-2.8
1,690,234	-		LRK53_RS07560	0.71	+0.8
1,690,234	-		LRK53_RS07560	0.71	-1.5
1,690,234	-		LRK53_RS07560	0.71	-3.7
1,690,234	-		LRK53_RS07560	0.71	-3.5
1,690,234	-		LRK53_RS07560	0.71	-2.2
1,690,287	+		LRK53_RS07560	0.76	-6.0
1,690,287	+		LRK53_RS07560	0.76	-2.0
1,690,287	+		LRK53_RS07560	0.76	-2.0
1,690,288	-		LRK53_RS07560	0.77	-0.2
1,690,288	-		LRK53_RS07560	0.77	-2.8
1,690,356	+		LRK53_RS07560	0.84	+0.8
1,690,356	+		LRK53_RS07560	0.84	-2.5
1,690,356	+		LRK53_RS07560	0.84	-0.8
1,690,357	-		LRK53_RS07560	0.84	-0.8
1,690,357	-		LRK53_RS07560	0.84	-3.0
1,690,491	+				-1.3
1,690,491	+				+0.2
1,690,491	+				-0.6
1,690,491	+				-1.2
1,690,491	+				-0.8
1,690,491	+				-1.1
1,690,492	-				+1.8
1,690,492	-				-0.5
1,690,492	-				-2.8
1,690,492	-				-0.8
1,690,492	-				-0.2
1,690,492	-				-1.2
1,690,492	-				-2.0
1,690,492	-				-2.2
1,690,543	+				-0.8
1,690,543	+				-2.0
1,690,543	+				-0.5
1,690,543	+				-0.3
1,690,543	+				-0.4
1,690,543	+				-0.8
1,690,543	+				-1.0
1,690,544	-				+0.5
1,690,544	-				-0.9
1,690,544	-				+0.1
1,690,544	-				-1.5
1,690,602	+				-0.2
1,690,602	+				+0.2
1,690,602	+				-0.2
1,690,602	+				-2.2
1,690,602	+				-0.3
1,690,603	-				-0.8
1,690,603	-				-0.4
1,690,603	-				+1.6
1,690,603	-				-0.8
1,690,931	+		LRK53_RS07565	0.22	-0.2
1,691,112	+		LRK53_RS07565	0.36	-3.5
1,691,112	+		LRK53_RS07565	0.36	-1.2
1,691,112	+		LRK53_RS07565	0.36	+0.8
1,691,113	-		LRK53_RS07565	0.36	-0.2
1,691,113	-		LRK53_RS07565	0.36	-1.2
1,691,113	-		LRK53_RS07565	0.36	+0.8
1,691,113	-		LRK53_RS07565	0.36	-0.8
1,691,189	+		LRK53_RS07565	0.42	-2.0
1,691,189	+		LRK53_RS07565	0.42	-1.8
1,691,189	+		LRK53_RS07565	0.42	-2.2
1,691,189	+		LRK53_RS07565	0.42	+0.8
1,691,189	+		LRK53_RS07565	0.42	-0.8
1,691,189	+		LRK53_RS07565	0.42	-4.7
1,691,189	+		LRK53_RS07565	0.42	-4.6
1,691,189	+		LRK53_RS07565	0.42	-2.6
1,691,189	+		LRK53_RS07565	0.42	-0.2
1,691,189	+		LRK53_RS07565	0.42	-3.0
1,691,189	+		LRK53_RS07565	0.42	-2.0
1,691,189	+		LRK53_RS07565	0.42	-1.2
1,691,189	+		LRK53_RS07565	0.42	-1.2
1,691,189	+		LRK53_RS07565	0.42	-0.8
1,691,189	+		LRK53_RS07565	0.42	-1.2
1,691,189	+		LRK53_RS07565	0.42	-1.2
1,691,189	+		LRK53_RS07565	0.42	-3.1
1,691,190	-		LRK53_RS07565	0.42	-1.8
1,691,190	-		LRK53_RS07565	0.42	-0.2
1,691,190	-		LRK53_RS07565	0.42	-1.5
1,691,190	-		LRK53_RS07565	0.42	-1.5
1,691,190	-		LRK53_RS07565	0.42	-2.2
1,691,190	-		LRK53_RS07565	0.42	-1.5
1,691,190	-		LRK53_RS07565	0.42	-2.0
1,691,190	-		LRK53_RS07565	0.42	-1.5
1,691,190	-		LRK53_RS07565	0.42	-2.4
1,691,190	-		LRK53_RS07565	0.42	-1.8
1,691,190	-		LRK53_RS07565	0.42	-2.4
1,691,190	-		LRK53_RS07565	0.42	-0.2
1,691,190	-		LRK53_RS07565	0.42	-3.3
1,691,190	-		LRK53_RS07565	0.42	-0.2
1,691,472	+		LRK53_RS07565	0.63	-0.2
1,691,472	+		LRK53_RS07565	0.63	-0.8
1,691,472	+		LRK53_RS07565	0.63	-3.1
1,691,472	+		LRK53_RS07565	0.63	-0.8
1,691,472	+		LRK53_RS07565	0.63	-1.2
1,691,473	-		LRK53_RS07565	0.64	+0.8
1,691,473	-		LRK53_RS07565	0.64	-0.8
1,691,473	-		LRK53_RS07565	0.64	-0.8
1,691,473	-		LRK53_RS07565	0.64	-3.0