Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS06970

Experiment: defined media with L-Serine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with L-Serine
1,571,381	+		LRK53_RS06965	0.83	-0.8
1,571,381	+		LRK53_RS06965	0.83	-0.5
1,571,381	+		LRK53_RS06965	0.83	-0.3
1,571,381	+		LRK53_RS06965	0.83	+0.8
1,571,381	+		LRK53_RS06965	0.83	-1.2
1,571,381	+		LRK53_RS06965	0.83	-0.2
1,571,381	+		LRK53_RS06965	0.83	-1.6
1,571,381	+		LRK53_RS06965	0.83	+0.5
1,571,381	+		LRK53_RS06965	0.83	+0.8
1,571,381	+		LRK53_RS06965	0.83	-1.8
1,571,381	+		LRK53_RS06965	0.83	+0.4
1,571,381	+		LRK53_RS06965	0.83	-2.0
1,571,381	+		LRK53_RS06965	0.83	-1.5
1,571,381	+		LRK53_RS06965	0.83	-2.3
1,571,381	+		LRK53_RS06965	0.83	-0.5
1,571,381	+		LRK53_RS06965	0.83	-0.8
1,571,381	+		LRK53_RS06965	0.83	-1.0
1,571,381	+		LRK53_RS06965	0.83	-2.3
1,571,381	+		LRK53_RS06965	0.83	-0.8
1,571,402	+		LRK53_RS06965	0.85	+0.8
1,571,402	+		LRK53_RS06965	0.85	-0.8
1,571,403	-		LRK53_RS06965	0.85	-1.2
1,571,415	-		LRK53_RS06965	0.87	-0.8
1,571,415	-		LRK53_RS06965	0.87	-0.5
1,571,415	-		LRK53_RS06965	0.87	-1.2
1,571,537	+				+0.2
1,571,537	+				+0.8
1,571,537	+				-0.9
1,571,537	+				+0.8
1,571,560	+				-0.2
1,571,560	+				-1.3
1,571,560	+				+0.1
1,571,560	+				+0.2
1,571,561	-				-1.1
1,571,561	-				+0.2
1,571,561	-				+0.8
1,571,561	-				-0.4
1,571,561	-				-0.1
1,571,561	-				-0.2
1,571,561	-				+0.2
1,571,561	-				-0.8
1,571,561	-				-1.5
1,571,561	-				-1.1
1,571,561	-				-2.3
1,571,561	-				-1.2
1,571,611	+				+0.8
1,571,611	+				+0.2
1,571,611	+				-1.0
1,571,611	+				-1.1
1,571,611	+				-1.5
1,571,612	-				+0.8
1,571,612	-				-1.8
1,571,612	-				-0.2
1,571,612	-				-1.1
1,571,612	-				+0.8
1,571,612	-				+0.2
1,571,612	-				-1.8
1,571,612	-				+0.1
1,571,612	-				-0.2
1,571,612	-				+0.6
1,571,612	-				-1.2
1,571,612	-				-0.8
1,571,612	-				-2.2
1,571,615	+				-1.8
1,571,615	+				-1.3
1,571,615	+				-1.8
1,571,615	+				-1.0
1,571,615	+				-1.2
1,571,615	+				-0.9
1,571,615	+				+0.2
1,571,615	+				-0.3
1,571,615	+				+1.8
1,571,615	+				-0.6
1,571,615	+				-2.0
1,571,615	+				-1.5
1,571,615	+				-1.8
1,571,615	+				-2.3
1,571,615	+				+0.3
1,571,615	+				-1.4
1,571,615	+				-1.2
1,571,615	+				-1.8
1,571,615	+				-1.1
1,571,615	+				+0.8
1,571,615	+				-2.0
1,571,615	+				-1.6
1,571,615	+				+0.4
1,571,615	+				-0.3
1,571,615	+				+0.2
1,571,615	+				-0.6
1,571,615	+				-0.5
1,571,615	+				-0.2
1,571,615	+				+2.4
1,571,616	-				+0.8
1,571,616	-				-1.5
1,571,616	-				-1.3
1,571,616	-				-0.3
1,571,616	-				-1.2
1,571,616	-				-0.8
1,571,616	-				-0.4
1,571,616	-				-0.2
1,571,616	-				-0.2
1,571,616	-				-0.2
1,571,616	-				+0.8
1,571,616	-				+0.0
1,571,616	-				-0.7
1,571,616	-				-1.2
1,571,616	-				+0.3
1,571,616	-				-1.2
1,571,616	-				-2.4
1,571,616	-				+0.1
1,571,616	-				-2.2
1,571,616	-				-0.2
1,571,616	-				-3.1
1,571,616	-				-0.4
1,571,616	-				-0.2
1,571,616	-				-1.0
1,571,616	-				-0.2
1,571,616	-				+0.2
1,571,616	-				-1.2
1,571,616	-				+0.4
1,571,616	-				-0.9
1,571,616	-				-1.2
1,571,616	-				-0.3
1,571,616	-				-2.0
1,571,616	-				-0.7
1,571,616	-				-0.2
1,571,616	-				-0.2
1,571,640	+				+2.0
1,571,640	+				-1.2
1,571,640	+				+0.3
1,571,640	+				-1.2
1,571,640	+				+0.4
1,571,640	+				-1.3
1,571,641	-				-1.0
1,571,641	-				-1.6
1,571,641	-				+0.5
1,571,641	-				-1.5
1,571,641	-				-0.2
1,571,641	-				-1.2
1,571,641	-				-2.0
1,571,641	-				-1.8
1,571,641	-				+0.8
1,571,641	-				-1.4
1,571,641	-				+0.8
1,571,641	-				+2.4
1,571,641	-				-1.2
1,571,641	-				-0.5
1,571,655	+				-0.4
1,571,655	+				-0.7
1,571,655	+				+2.8
1,571,655	+				-0.1
1,571,655	+				-0.2
1,571,655	+				-1.2
1,571,655	+				-0.6
1,571,656	-				-0.4
1,571,656	-				-0.6
1,571,656	-				+0.8
1,571,656	-				-1.5
1,571,656	-				-1.5
1,571,712	+				-1.3
1,571,712	+				-2.0
1,571,712	+				-0.5
1,571,712	+				-1.5
1,571,712	+				-1.3
1,571,712	+				-1.2
1,571,712	+				-3.1
1,571,712	+				+2.4
1,571,712	+				-0.3
1,571,712	+				-1.1
1,571,712	+				-0.2
1,571,713	-				+0.1
1,571,713	-				+0.8
1,571,713	-				-0.2
1,571,713	-				-0.2
1,571,713	-				+1.8
1,571,713	-				-1.7
1,571,713	-				-0.8
1,571,713	-				+0.2
1,571,713	-				-1.1
1,571,713	-				+0.1
1,571,713	-				+1.1
1,571,713	-				-1.8
1,571,737	+				-0.5
1,571,737	+				-1.2
1,571,737	+				-0.2
1,571,737	+				-0.2
1,571,737	+				-0.6
1,571,738	-				-0.8
1,571,738	-				-1.2
1,571,738	-				+0.2
1,571,738	-				-0.5
1,571,738	-				-0.2
1,571,738	-				+0.4
1,571,738	-				-1.0
1,571,738	-				-2.1
1,571,738	-				-1.5
1,571,738	-				+0.2
1,571,786	+				-1.2
1,571,787	-				-1.1
1,571,787	-				+0.2
1,571,787	-				-2.0
1,571,853	+				-0.6
1,571,853	+				-0.2
1,571,853	+				-0.8
1,571,853	+				-0.3
1,571,853	+				-0.2
1,571,853	+				+1.8
1,571,853	+				-0.4
1,571,853	+				+0.2
1,571,853	+				-0.8
1,571,854	-				-0.2
1,571,854	-				-0.8
1,571,854	-				-0.2
1,571,854	-				-0.8
1,571,854	-				+0.8
1,571,854	-				-1.0
1,571,854	-				+1.8
1,571,888	+				-1.4
1,571,888	+				-1.0
1,571,889	-				-0.2
1,571,947	+		LRK53_RS06970	0.24	-0.2
1,571,947	+		LRK53_RS06970	0.24	-1.9
1,571,948	-		LRK53_RS06970	0.24	-2.3
1,571,948	-		LRK53_RS06970	0.24	-2.5
1,571,948	-		LRK53_RS06970	0.24	-0.4
1,571,979	+		LRK53_RS06970	0.37	-2.2
1,571,979	+		LRK53_RS06970	0.37	-0.8
1,571,979	+		LRK53_RS06970	0.37	-0.8
1,571,979	+		LRK53_RS06970	0.37	-1.8
1,571,979	+		LRK53_RS06970	0.37	-1.7
1,571,979	+		LRK53_RS06970	0.37	-1.8
1,571,979	+		LRK53_RS06970	0.37	-0.2
1,571,979	+		LRK53_RS06970	0.37	-0.4
1,571,980	-		LRK53_RS06970	0.38	-0.2
1,571,980	-		LRK53_RS06970	0.38	-0.2
1,571,980	-		LRK53_RS06970	0.38	+0.8
1,571,980	-		LRK53_RS06970	0.38	-0.9
1,571,980	-		LRK53_RS06970	0.38	-1.5
1,571,980	-		LRK53_RS06970	0.38	-1.8
1,572,007	+		LRK53_RS06970	0.49	-0.9
1,572,007	+		LRK53_RS06970	0.49	-1.1
1,572,007	+		LRK53_RS06970	0.49	-0.2
1,572,007	+		LRK53_RS06970	0.49	-1.5
1,572,007	+		LRK53_RS06970	0.49	-0.8
1,572,007	+		LRK53_RS06970	0.49	-0.5
1,572,008	-		LRK53_RS06970	0.50	+0.2
1,572,008	-		LRK53_RS06970	0.50	-1.5
1,572,008	-		LRK53_RS06970	0.50	-0.2
1,572,008	-		LRK53_RS06970	0.50	-2.3
1,572,008	-		LRK53_RS06970	0.50	+0.8
1,572,008	-		LRK53_RS06970	0.50	-0.6
1,572,008	-		LRK53_RS06970	0.50	+0.3
1,572,008	-		LRK53_RS06970	0.50	-0.8
1,572,008	-		LRK53_RS06970	0.50	-0.8
1,572,111	+				-2.6
1,572,111	+				-0.5
1,572,111	+				-0.8
1,572,111	+				+1.8
1,572,112	-				-0.2
1,572,112	-				+0.8
1,572,112	-				-0.8
1,572,112	-				-0.3
1,572,112	-				-0.5
1,572,145	+				+0.8
1,572,145	+				+0.4
1,572,145	+				-0.8
1,572,145	+				-0.2
1,572,145	+				-1.8
1,572,145	+				-1.0
1,572,145	+				-1.5
1,572,145	+				-1.3
1,572,145	+				-1.5
1,572,145	+				-0.8
1,572,145	+				+0.2
1,572,145	+				-0.8
1,572,145	+				+0.2
1,572,145	+				-1.4
1,572,145	+				-1.6
1,572,145	+				-0.5
1,572,145	+				-1.2
1,572,145	+				+0.8
1,572,145	+				-1.5
1,572,145	+				+0.6
1,572,145	+				-1.5
1,572,145	+				-0.4
1,572,145	+				+0.1
1,572,145	+				+0.8
1,572,145	+				+0.8
1,572,145	+				-1.3
1,572,145	+				-0.8
1,572,145	+				-0.2
1,572,146	-				+0.0
1,572,146	-				-2.3
1,572,146	-				-1.8
1,572,146	-				-0.5
1,572,146	-				+1.6
1,572,146	-				-0.2
1,572,146	-				-1.0
1,572,146	-				-0.2
1,572,146	-				-0.9
1,572,146	-				+0.8
1,572,146	-				-0.8
1,572,146	-				+0.8
1,572,146	-				-2.3
1,572,146	-				-1.1
1,572,146	-				-0.8
1,572,146	-				-1.3
1,572,146	-				-1.9
1,572,146	-				+0.2
1,572,146	-				-0.2
1,572,146	-				-0.3
1,572,146	-				-1.0
1,572,146	-				-0.8
1,572,146	-				-0.9
1,572,146	-				-1.0
1,572,146	-				-0.2
1,572,146	-				-0.8
1,572,146	-				-0.8
1,572,146	-				-1.1
1,572,146	-				-0.4
1,572,146	-				-1.6
1,572,146	-				-0.1
1,572,229	+				-1.3
1,572,229	+				-0.8
1,572,229	+				-0.2
1,572,229	+				-2.0
1,572,229	+				-1.6
1,572,229	+				-0.9
1,572,229	+				+1.4
1,572,229	+				-0.8
1,572,229	+				-1.4
1,572,229	+				+0.8
1,572,229	+				+1.4
1,572,229	+				-1.5
1,572,230	-				+0.2
1,572,230	-				-0.5
1,572,230	-				-1.0
1,572,230	-				+0.4
1,572,230	-				+1.4
1,572,230	-				-0.6
1,572,230	-				-0.8
1,572,230	-				-1.2
1,572,230	-				-0.9
1,572,230	-				-1.2
1,572,230	-				+0.8
1,572,230	-				-0.9
1,572,230	-				+0.2
1,572,230	-				-0.9
1,572,230	-				-1.5
1,572,407	+				-1.8
1,572,407	+				-1.9
1,572,408	-				-0.2
1,572,408	-				+0.1
1,572,414	+				+0.8
1,572,414	+				-1.3
1,572,414	+				+1.8
1,572,447	+				-0.8
1,572,447	+				+1.6
1,572,447	+				-2.4
1,572,448	-				-0.9
1,572,448	-				-0.3
1,572,448	-				+0.8
1,572,454	+				+0.8
1,572,454	+				-1.6
1,572,454	+				-0.5
1,572,515	+				-2.5
1,572,516	-				-0.3
1,572,517	+				+0.2
1,572,517	+				-2.2
1,572,524	+				-0.2
1,572,525	-				-0.6
1,572,525	-				-1.3
1,572,525	-				-0.8
1,572,536	-		LRK53_RS06975	0.11	-0.2
1,572,559	-		LRK53_RS06975	0.16	-0.8
1,572,569	-		LRK53_RS06975	0.18	+0.2
1,572,590	+		LRK53_RS06975	0.22	-1.0
1,572,591	-		LRK53_RS06975	0.22	-0.8
1,572,726	+		LRK53_RS06975	0.49	-0.2
1,572,727	-		LRK53_RS06975	0.49	-1.3
1,572,745	-		LRK53_RS06975	0.52	-1.2
1,572,780	-		LRK53_RS06975	0.59	-0.9
1,572,783	+		LRK53_RS06975	0.60	+0.1
1,572,783	+		LRK53_RS06975	0.60	+0.8
1,572,783	+		LRK53_RS06975	0.60	-2.3
1,572,784	-		LRK53_RS06975	0.60	-0.4
1,572,784	-		LRK53_RS06975	0.60	-1.2
1,572,784	-		LRK53_RS06975	0.60	-2.2
1,572,784	-		LRK53_RS06975	0.60	-0.2
1,572,784	-		LRK53_RS06975	0.60	-0.9
1,572,784	-		LRK53_RS06975	0.60	-0.8
1,572,784	-		LRK53_RS06975	0.60	-2.0
1,572,788	+		LRK53_RS06975	0.61	-0.0
1,572,789	-		LRK53_RS06975	0.61	-0.0
1,572,789	-		LRK53_RS06975	0.61	+0.8
1,572,789	-		LRK53_RS06975	0.61	-0.4
1,572,834	-		LRK53_RS06975	0.70	-0.4
1,572,855	+		LRK53_RS06975	0.74	-0.5
1,572,864	+		LRK53_RS06975	0.76	-0.8
1,572,889	+		LRK53_RS06975	0.81	-0.2
1,572,921	+		LRK53_RS06975	0.87	-0.9
1,572,922	-		LRK53_RS06975	0.87	-0.7
1,572,969	+				-1.7
1,572,975	+				+1.6
1,573,014	+				-1.2
1,573,112	+		LRK53_RS06980	0.40	-1.0
1,573,112	+		LRK53_RS06980	0.40	+0.2
1,573,114	+		LRK53_RS06980	0.40	-0.6