Strain Fitness in Escherichia coli ECRC98 around JDDGAC_24320

Experiment: K30

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K30
4,665,364	+	norR	JDDGAC_24315	0.62	-0.5
4,665,579	+	norR	JDDGAC_24315	0.77	+0.3
4,665,579	+	norR	JDDGAC_24315	0.77	+0.1
4,665,580	-	norR	JDDGAC_24315	0.77	-0.9
4,665,612	-	norR	JDDGAC_24315	0.79	-0.9
4,665,649	+	norR	JDDGAC_24315	0.81	-0.0
4,665,820	+				+1.3
4,665,821	-				+1.0
4,665,932	+				-1.4
4,665,933	-				-1.3
4,665,936	+				-0.6
4,665,950	+				-1.0
4,666,171	+	gutQ	JDDGAC_24320	0.25	-0.9
4,666,171	+	gutQ	JDDGAC_24320	0.25	+0.0
4,666,172	-	gutQ	JDDGAC_24320	0.25	-1.1
4,666,192	+	gutQ	JDDGAC_24320	0.27	-1.6
4,666,192	+	gutQ	JDDGAC_24320	0.27	-1.6
4,666,192	+	gutQ	JDDGAC_24320	0.27	-0.4
4,666,233	+	gutQ	JDDGAC_24320	0.31	+0.3
4,666,234	-	gutQ	JDDGAC_24320	0.31	-0.1
4,666,234	-	gutQ	JDDGAC_24320	0.31	-0.1
4,666,365	+	gutQ	JDDGAC_24320	0.45	-0.9
4,666,479	+	gutQ	JDDGAC_24320	0.57	-0.5
4,666,604	+	gutQ	JDDGAC_24320	0.70	-0.9
4,666,611	+	gutQ	JDDGAC_24320	0.70	+0.8
4,666,611	+	gutQ	JDDGAC_24320	0.70	-2.1
4,666,858	+				+0.9
4,666,910	+				-0.5
4,666,963	+				-0.2
4,667,010	-	srlR	JDDGAC_24325	0.16	-0.0
4,667,010	-	srlR	JDDGAC_24325	0.16	-1.4
4,667,097	+	srlR	JDDGAC_24325	0.27	+0.7
4,667,098	-	srlR	JDDGAC_24325	0.27	+0.8
4,667,098	-	srlR	JDDGAC_24325	0.27	-0.1
4,667,098	-	srlR	JDDGAC_24325	0.27	-0.9
4,667,098	-	srlR	JDDGAC_24325	0.27	+1.3
4,667,252	-	srlR	JDDGAC_24325	0.47	+0.6
4,667,252	-	srlR	JDDGAC_24325	0.47	-0.7
4,667,320	+	srlR	JDDGAC_24325	0.56	-0.1
4,667,323	+	srlR	JDDGAC_24325	0.56	+1.8
4,667,324	-	srlR	JDDGAC_24325	0.56	-0.1
4,667,360	-	srlR	JDDGAC_24325	0.61	-0.5
4,667,398	+	srlR	JDDGAC_24325	0.66	+1.0
4,667,398	+	srlR	JDDGAC_24325	0.66	-1.0
4,667,455	+	srlR	JDDGAC_24325	0.73	+0.4
4,667,456	-	srlR	JDDGAC_24325	0.73	-0.0
4,667,464	+	srlR	JDDGAC_24325	0.74	-0.2
4,667,464	+	srlR	JDDGAC_24325	0.74	-0.2
4,667,506	-	srlR	JDDGAC_24325	0.80	-0.2
4,667,509	+	srlR	JDDGAC_24325	0.80	+0.4
4,667,509	+	srlR	JDDGAC_24325	0.80	+1.4
4,667,509	+	srlR	JDDGAC_24325	0.80	-0.9
4,667,510	-	srlR	JDDGAC_24325	0.80	-0.3
4,667,510	-	srlR	JDDGAC_24325	0.80	-1.9
4,667,510	-	srlR	JDDGAC_24325	0.80	+0.4
4,667,558	-	srlR	JDDGAC_24325	0.86	-0.9
4,667,558	-	srlR	JDDGAC_24325	0.86	-0.5
4,667,625	+				+2.2
4,667,625	+				-0.8
4,667,626	-				-0.8
4,667,673	-				-0.9
4,667,682	-				+0.2
4,667,731	-				-0.4
4,667,824	+	gutM	JDDGAC_24330	0.26	+0.6
4,667,878	+	gutM	JDDGAC_24330	0.41	-2.4