Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS18090

Experiment: defined media with 20AA_mix

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with 20AA_mix
3,978,288	-		LRK53_RS18085	0.52	-1.1
3,978,288	-		LRK53_RS18085	0.52	+0.6
3,978,288	-		LRK53_RS18085	0.52	+0.2
3,978,288	-		LRK53_RS18085	0.52	-0.1
3,978,407	+		LRK53_RS18085	0.60	-1.6
3,978,407	+		LRK53_RS18085	0.60	-0.8
3,978,407	+		LRK53_RS18085	0.60	-1.1
3,978,407	+		LRK53_RS18085	0.60	-1.4
3,978,407	+		LRK53_RS18085	0.60	+1.2
3,978,408	-		LRK53_RS18085	0.60	-2.1
3,978,408	-		LRK53_RS18085	0.60	+0.8
3,978,408	-		LRK53_RS18085	0.60	-0.4
3,978,408	-		LRK53_RS18085	0.60	-0.1
3,978,408	-		LRK53_RS18085	0.60	-0.4
3,978,408	-		LRK53_RS18085	0.60	+1.2
3,978,428	+		LRK53_RS18085	0.61	+1.2
3,978,429	-		LRK53_RS18085	0.61	+0.6
3,978,536	+		LRK53_RS18085	0.67	-1.5
3,978,536	+		LRK53_RS18085	0.67	-0.8
3,978,537	-		LRK53_RS18085	0.67	+1.2
3,978,537	-		LRK53_RS18085	0.67	+1.2
3,978,537	-		LRK53_RS18085	0.67	-0.0
3,978,734	+		LRK53_RS18085	0.79	+1.2
3,978,734	+		LRK53_RS18085	0.79	-1.1
3,978,734	+		LRK53_RS18085	0.79	-0.8
3,978,734	+		LRK53_RS18085	0.79	-1.4
3,978,734	+		LRK53_RS18085	0.79	+1.2
3,978,735	-		LRK53_RS18085	0.79	-0.4
3,978,735	-		LRK53_RS18085	0.79	+1.2
3,978,735	-		LRK53_RS18085	0.79	+2.2
3,978,735	-		LRK53_RS18085	0.79	-0.9
3,978,735	-		LRK53_RS18085	0.79	-0.4
3,978,735	-		LRK53_RS18085	0.79	+0.2
3,978,735	-		LRK53_RS18085	0.79	-0.8
3,978,735	-		LRK53_RS18085	0.79	+0.2
3,978,735	-		LRK53_RS18085	0.79	-1.4
3,978,735	-		LRK53_RS18085	0.79	+1.2
3,978,735	-		LRK53_RS18085	0.79	+1.2
3,978,980	+				-1.1
3,978,980	+				+1.8
3,978,981	-				-0.0
3,978,981	-				+0.2
3,978,981	-				-0.4
3,978,981	-				+0.2
3,978,981	-				-0.2
3,978,981	-				-0.4
3,978,981	-				-0.8
3,978,981	-				+0.2
3,978,981	-				-0.8
3,978,990	-				-0.2
3,978,990	-				+0.2
3,979,127	+				-0.8
3,979,127	+				-2.3
3,979,127	+				-1.0
3,979,128	-				+1.2
3,979,128	-				-1.4
3,979,128	-				-0.3
3,979,128	-				+1.2
3,979,369	+				-0.0
3,979,369	+				-0.0
3,979,370	-				-1.6
3,979,370	-				-1.8
3,979,471	+		LRK53_RS18090	0.11	+0.2
3,979,471	+		LRK53_RS18090	0.11	+1.8
3,979,471	+		LRK53_RS18090	0.11	+0.6
3,979,471	+		LRK53_RS18090	0.11	+1.2
3,979,472	-		LRK53_RS18090	0.11	-1.1
3,979,472	-		LRK53_RS18090	0.11	+1.2
3,979,666	+		LRK53_RS18090	0.20	-0.8
3,979,666	+		LRK53_RS18090	0.20	-1.1
3,979,666	+		LRK53_RS18090	0.20	-0.8
3,979,667	-		LRK53_RS18090	0.20	-1.6
3,979,801	+		LRK53_RS18090	0.27	+0.6
3,979,801	+		LRK53_RS18090	0.27	+0.8
3,979,801	+		LRK53_RS18090	0.27	+0.2
3,979,801	+		LRK53_RS18090	0.27	-1.7
3,979,802	-		LRK53_RS18090	0.27	-0.8
3,979,802	-		LRK53_RS18090	0.27	-2.5
3,979,802	-		LRK53_RS18090	0.27	+0.2
3,979,813	+		LRK53_RS18090	0.27	+1.2
3,979,813	+		LRK53_RS18090	0.27	+2.2
3,979,813	+		LRK53_RS18090	0.27	-0.4
3,979,813	+		LRK53_RS18090	0.27	+0.2
3,979,813	+		LRK53_RS18090	0.27	-0.4
3,979,813	+		LRK53_RS18090	0.27	-0.2
3,979,813	+		LRK53_RS18090	0.27	-1.3
3,979,813	+		LRK53_RS18090	0.27	-1.1
3,979,813	+		LRK53_RS18090	0.27	+0.2
3,979,813	+		LRK53_RS18090	0.27	-1.8
3,979,813	+		LRK53_RS18090	0.27	-0.1
3,979,813	+		LRK53_RS18090	0.27	-1.8
3,979,813	+		LRK53_RS18090	0.27	+0.2
3,979,813	+		LRK53_RS18090	0.27	+0.2
3,979,813	+		LRK53_RS18090	0.27	-1.2
3,979,813	+		LRK53_RS18090	0.27	-0.4
3,979,813	+		LRK53_RS18090	0.27	-1.3
3,979,813	+		LRK53_RS18090	0.27	-1.4
3,979,813	+		LRK53_RS18090	0.27	-2.0
3,979,813	+		LRK53_RS18090	0.27	-0.4
3,979,813	+		LRK53_RS18090	0.27	+1.2
3,979,814	-		LRK53_RS18090	0.27	-0.4
3,979,814	-		LRK53_RS18090	0.27	-0.4
3,979,814	-		LRK53_RS18090	0.27	-0.1
3,979,814	-		LRK53_RS18090	0.27	-1.2
3,979,814	-		LRK53_RS18090	0.27	+2.8
3,979,814	-		LRK53_RS18090	0.27	-1.0
3,979,814	-		LRK53_RS18090	0.27	+2.2
3,979,814	-		LRK53_RS18090	0.27	-0.4
3,979,814	-		LRK53_RS18090	0.27	-1.0
3,979,814	-		LRK53_RS18090	0.27	-0.1
3,979,814	-		LRK53_RS18090	0.27	+1.2
3,979,880	-		LRK53_RS18090	0.30	-0.8
3,979,880	-		LRK53_RS18090	0.30	-0.4
3,980,021	+		LRK53_RS18090	0.37	+0.2
3,980,022	+		LRK53_RS18090	0.37	-1.4
3,980,022	+		LRK53_RS18090	0.37	-0.1
3,980,022	+		LRK53_RS18090	0.37	-1.8
3,980,022	+		LRK53_RS18090	0.37	-0.7
3,980,022	+		LRK53_RS18090	0.37	-1.4
3,980,022	+		LRK53_RS18090	0.37	+0.3
3,980,022	+		LRK53_RS18090	0.37	+1.2
3,980,022	+		LRK53_RS18090	0.37	-0.4
3,980,023	-		LRK53_RS18090	0.37	-0.4
3,980,023	-		LRK53_RS18090	0.37	-1.2
3,980,023	-		LRK53_RS18090	0.37	+1.2
3,980,023	-		LRK53_RS18090	0.37	-1.4
3,980,023	-		LRK53_RS18090	0.37	-1.5
3,980,023	-		LRK53_RS18090	0.37	+0.0
3,980,023	-		LRK53_RS18090	0.37	+1.2
3,980,023	-		LRK53_RS18090	0.37	-1.4
3,980,023	-		LRK53_RS18090	0.37	+0.6
3,980,023	-		LRK53_RS18090	0.37	-1.4
3,980,023	-		LRK53_RS18090	0.37	+1.2
3,980,191	-		LRK53_RS18090	0.46	+0.6
3,980,191	-		LRK53_RS18090	0.46	+0.2
3,980,200	+		LRK53_RS18090	0.46	-0.8
3,980,200	+		LRK53_RS18090	0.46	-0.4
3,980,200	+		LRK53_RS18090	0.46	-1.8
3,980,200	+		LRK53_RS18090	0.46	+1.2
3,980,200	+		LRK53_RS18090	0.46	+0.5
3,980,200	+		LRK53_RS18090	0.46	+0.2
3,980,200	+		LRK53_RS18090	0.46	-0.4
3,980,200	+		LRK53_RS18090	0.46	-0.4
3,980,200	+		LRK53_RS18090	0.46	-1.8
3,980,201	-		LRK53_RS18090	0.46	-0.4
3,980,201	-		LRK53_RS18090	0.46	-1.4
3,980,201	-		LRK53_RS18090	0.46	+1.2
3,980,201	-		LRK53_RS18090	0.46	+0.2
3,980,201	-		LRK53_RS18090	0.46	-1.8
3,980,201	-		LRK53_RS18090	0.46	-1.0
3,980,201	-		LRK53_RS18090	0.46	-0.8
3,980,201	-		LRK53_RS18090	0.46	-0.4
3,980,201	-		LRK53_RS18090	0.46	-0.4
3,980,202	+		LRK53_RS18090	0.46	-1.6
3,980,202	+		LRK53_RS18090	0.46	-1.1
3,980,202	+		LRK53_RS18090	0.46	+1.2
3,980,203	-		LRK53_RS18090	0.46	-1.6
3,980,203	-		LRK53_RS18090	0.46	-1.4
3,980,203	-		LRK53_RS18090	0.46	-1.7
3,980,203	-		LRK53_RS18090	0.46	-0.8
3,980,203	-		LRK53_RS18090	0.46	-0.4
3,980,614	+		LRK53_RS18090	0.66	-0.4
3,980,614	+		LRK53_RS18090	0.66	-1.1
3,980,614	+		LRK53_RS18090	0.66	-0.6
3,980,614	+		LRK53_RS18090	0.66	+0.5
3,980,614	+		LRK53_RS18090	0.66	+1.2
3,980,614	+		LRK53_RS18090	0.66	-1.1
3,980,614	+		LRK53_RS18090	0.66	+0.2
3,980,614	+		LRK53_RS18090	0.66	+1.2
3,980,615	-		LRK53_RS18090	0.66	-0.8
3,980,615	-		LRK53_RS18090	0.66	+0.2
3,980,615	-		LRK53_RS18090	0.66	-0.4
3,980,615	-		LRK53_RS18090	0.66	+0.2
3,980,615	-		LRK53_RS18090	0.66	-0.4
3,980,615	-		LRK53_RS18090	0.66	-1.4
3,980,660	+		LRK53_RS18090	0.68	-1.2
3,980,660	+		LRK53_RS18090	0.68	-1.1
3,980,660	+		LRK53_RS18090	0.68	-0.4
3,980,660	+		LRK53_RS18090	0.68	-1.4
3,980,660	+		LRK53_RS18090	0.68	-0.1
3,980,661	-		LRK53_RS18090	0.68	-0.4
3,980,661	-		LRK53_RS18090	0.68	+1.5
3,980,669	+		LRK53_RS18090	0.69	-1.8
3,980,669	+		LRK53_RS18090	0.69	+2.2
3,980,669	+		LRK53_RS18090	0.69	-0.7
3,980,669	+		LRK53_RS18090	0.69	-1.1
3,980,669	+		LRK53_RS18090	0.69	-1.8
3,980,669	+		LRK53_RS18090	0.69	-0.4
3,980,669	+		LRK53_RS18090	0.69	-1.1
3,980,669	+		LRK53_RS18090	0.69	+0.2
3,980,669	+		LRK53_RS18090	0.69	-0.4
3,980,669	+		LRK53_RS18090	0.69	-1.0
3,980,669	+		LRK53_RS18090	0.69	+0.2
3,980,669	+		LRK53_RS18090	0.69	-1.8
3,980,669	+		LRK53_RS18090	0.69	-0.8
3,980,669	+		LRK53_RS18090	0.69	-2.3
3,980,669	+		LRK53_RS18090	0.69	-0.5
3,980,669	+		LRK53_RS18090	0.69	+1.2
3,980,669	+		LRK53_RS18090	0.69	-0.6
3,980,669	+		LRK53_RS18090	0.69	+0.6
3,980,669	+		LRK53_RS18090	0.69	-0.8
3,980,669	+		LRK53_RS18090	0.69	+1.6
3,980,670	-		LRK53_RS18090	0.69	-1.1
3,980,670	-		LRK53_RS18090	0.69	-0.4
3,980,670	-		LRK53_RS18090	0.69	+1.2
3,980,670	-		LRK53_RS18090	0.69	-2.4
3,980,670	-		LRK53_RS18090	0.69	+1.2
3,980,670	-		LRK53_RS18090	0.69	-1.6
3,980,670	-		LRK53_RS18090	0.69	-0.6
3,980,670	-		LRK53_RS18090	0.69	-1.1
3,980,670	-		LRK53_RS18090	0.69	-2.0
3,980,670	-		LRK53_RS18090	0.69	-0.4
3,980,670	-		LRK53_RS18090	0.69	-2.6
3,980,670	-		LRK53_RS18090	0.69	-0.8
3,980,670	-		LRK53_RS18090	0.69	+0.5
3,980,670	-		LRK53_RS18090	0.69	+0.1
3,980,670	-		LRK53_RS18090	0.69	-0.0
3,980,670	-		LRK53_RS18090	0.69	-0.6
3,980,920	+		LRK53_RS18090	0.81	-0.9
3,980,920	+		LRK53_RS18090	0.81	+0.3
3,980,920	+		LRK53_RS18090	0.81	+1.2
3,980,920	+		LRK53_RS18090	0.81	+0.2
3,980,920	+		LRK53_RS18090	0.81	-1.1
3,980,920	+		LRK53_RS18090	0.81	-0.4
3,980,921	-		LRK53_RS18090	0.81	-1.4
3,980,921	-		LRK53_RS18090	0.81	+0.2
3,980,921	-		LRK53_RS18090	0.81	-1.6
3,980,921	-		LRK53_RS18090	0.81	+0.2
3,980,921	-		LRK53_RS18090	0.81	+0.2
3,981,166	+				-0.6
3,981,311	-				+0.2
3,981,311	-				-0.8
3,981,311	-				-0.3
3,981,311	-				+1.2
3,981,379	+				-1.2
3,981,379	+				+0.2
3,981,379	+				+0.2
3,981,449	+				+1.2
3,981,449	+				-1.1
3,981,449	+				-1.9
3,981,449	+				-1.1
3,981,450	-				+1.2
3,981,450	-				-0.4
3,981,450	-				-0.0
3,981,488	+		LRK53_RS18095	0.11	-1.4
3,981,488	+		LRK53_RS18095	0.11	+0.2
3,981,489	-		LRK53_RS18095	0.11	-0.2
3,981,489	-		LRK53_RS18095	0.11	-1.4
3,981,489	-		LRK53_RS18095	0.11	-1.1
3,981,500	+		LRK53_RS18095	0.13	-0.8
3,981,500	+		LRK53_RS18095	0.13	-3.0
3,981,500	+		LRK53_RS18095	0.13	-0.1
3,981,500	+		LRK53_RS18095	0.13	+1.2
3,981,500	+		LRK53_RS18095	0.13	-0.5
3,981,500	+		LRK53_RS18095	0.13	+1.2
3,981,500	+		LRK53_RS18095	0.13	-1.4
3,981,501	-		LRK53_RS18095	0.13	-2.4
3,981,501	-		LRK53_RS18095	0.13	-0.4
3,981,501	-		LRK53_RS18095	0.13	-0.4
3,981,501	-		LRK53_RS18095	0.13	-1.0
3,981,501	-		LRK53_RS18095	0.13	-0.4
3,981,501	-		LRK53_RS18095	0.13	-1.4
3,981,668	+		LRK53_RS18095	0.35	+0.8
3,981,668	+		LRK53_RS18095	0.35	-0.4
3,981,668	+		LRK53_RS18095	0.35	+1.8
3,981,668	+		LRK53_RS18095	0.35	-0.8
3,981,668	+		LRK53_RS18095	0.35	+1.2
3,981,668	+		LRK53_RS18095	0.35	-1.0
3,981,669	-		LRK53_RS18095	0.35	-1.1
3,981,669	-		LRK53_RS18095	0.35	+0.0
3,981,669	-		LRK53_RS18095	0.35	-0.4
3,981,869	+		LRK53_RS18095	0.62	+0.5
3,981,869	+		LRK53_RS18095	0.62	+0.2
3,981,869	+		LRK53_RS18095	0.62	+0.2
3,981,869	+		LRK53_RS18095	0.62	-0.9
3,981,869	+		LRK53_RS18095	0.62	-2.4
3,981,869	+		LRK53_RS18095	0.62	+1.2
3,981,870	-		LRK53_RS18095	0.62	-1.4
3,981,870	-		LRK53_RS18095	0.62	+0.2
3,981,870	-		LRK53_RS18095	0.62	-3.0
3,981,903	+		LRK53_RS18095	0.66	-1.8
3,981,903	+		LRK53_RS18095	0.66	-0.3
3,981,903	+		LRK53_RS18095	0.66	+0.2
3,981,904	-		LRK53_RS18095	0.66	-1.6
3,981,904	-		LRK53_RS18095	0.66	+0.2
3,981,904	-		LRK53_RS18095	0.66	+0.2
3,982,242	+				+0.8
3,982,243	-				-1.5
3,982,243	-				+0.5
3,982,243	-				+1.2