Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16040

Experiment: defined media with 20AA_mix

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with 20AA_mix
3,521,291	+		LRK53_RS16030	0.59	-1.2
3,521,291	+		LRK53_RS16030	0.59	-0.6
3,521,291	+		LRK53_RS16030	0.59	+1.4
3,521,291	+		LRK53_RS16030	0.59	-2.9
3,521,291	+		LRK53_RS16030	0.59	+0.4
3,521,291	+		LRK53_RS16030	0.59	-0.2
3,521,291	+		LRK53_RS16030	0.59	+2.4
3,521,291	+		LRK53_RS16030	0.59	-0.8
3,521,291	+		LRK53_RS16030	0.59	+1.8
3,521,291	+		LRK53_RS16030	0.59	-0.2
3,521,291	+		LRK53_RS16030	0.59	-0.2
3,521,292	-		LRK53_RS16030	0.59	-0.2
3,521,345	+		LRK53_RS16030	0.71	-0.6
3,521,345	+		LRK53_RS16030	0.71	-1.9
3,521,345	+		LRK53_RS16030	0.71	-0.2
3,521,345	+		LRK53_RS16030	0.71	-0.2
3,521,345	+		LRK53_RS16030	0.71	-1.4
3,521,346	-		LRK53_RS16030	0.71	-1.2
3,521,346	-		LRK53_RS16030	0.71	+0.4
3,521,346	-		LRK53_RS16030	0.71	+0.4
3,521,346	-		LRK53_RS16030	0.71	-2.3
3,521,387	+		LRK53_RS16030	0.80	+1.4
3,521,387	+		LRK53_RS16030	0.80	-0.2
3,521,388	-		LRK53_RS16030	0.80	+1.4
3,521,388	-		LRK53_RS16030	0.80	+0.2
3,521,388	-		LRK53_RS16030	0.80	-1.6
3,521,388	-		LRK53_RS16030	0.80	+0.4
3,521,388	-		LRK53_RS16030	0.80	-1.5
3,521,388	-		LRK53_RS16030	0.80	-0.2
3,521,501	-				+0.4
3,521,501	-				-0.6
3,521,686	+				+0.0
3,521,686	+				+1.4
3,521,686	+				-0.2
3,521,686	+				-0.9
3,521,686	+				+0.1
3,521,686	+				+0.4
3,521,686	+				-0.2
3,521,686	+				-0.6
3,521,686	+				-1.7
3,521,686	+				-0.9
3,521,686	+				-0.2
3,521,687	-				-1.5
3,521,687	-				-0.6
3,521,687	-				+1.4
3,521,687	-				-0.6
3,521,798	-		LRK53_RS16035	0.16	+2.4
3,521,798	-		LRK53_RS16035	0.16	-1.2
3,521,798	-		LRK53_RS16035	0.16	+1.4
3,521,881	+		LRK53_RS16035	0.33	+1.4
3,521,881	+		LRK53_RS16035	0.33	+0.8
3,521,881	+		LRK53_RS16035	0.33	-0.2
3,521,882	-		LRK53_RS16035	0.34	-0.6
3,521,882	-		LRK53_RS16035	0.34	+1.4
3,521,882	-		LRK53_RS16035	0.34	+0.4
3,521,924	+		LRK53_RS16035	0.42	+0.4
3,521,924	+		LRK53_RS16035	0.42	+0.4
3,522,079	+		LRK53_RS16035	0.75	-1.9
3,522,190	+				-0.3
3,522,190	+				+0.4
3,522,190	+				+0.8
3,522,190	+				+0.8
3,522,190	+				-0.2
3,522,190	+				+0.4
3,522,190	+				+0.4
3,522,190	+				-0.9
3,522,190	+				+0.9
3,522,190	+				+2.4
3,522,190	+				-0.6
3,522,190	+				-0.7
3,522,190	+				+0.9
3,522,190	+				+1.4
3,522,190	+				-0.2
3,522,190	+				-1.2
3,522,190	+				-1.4
3,522,191	-				-2.8
3,522,191	-				-1.4
3,522,191	-				-0.2
3,522,191	-				+2.4
3,522,191	-				-0.2
3,522,191	-				+0.4
3,522,191	-				-0.7
3,522,191	-				-0.2
3,522,191	-				+0.4
3,522,191	-				+0.4
3,522,191	-				+0.7
3,522,191	-				+0.4
3,522,191	-				-0.2
3,522,191	-				+1.4
3,522,197	-				+0.7
3,522,197	-				+0.7
3,522,238	+				-1.4
3,522,238	+				-0.6
3,522,238	+				+0.7
3,522,239	-				+0.1
3,522,239	-				-1.4
3,522,239	-				+0.1
3,522,239	-				-1.2
3,522,239	-				-2.0
3,522,281	+				-0.6
3,522,281	+				-0.8
3,522,281	+				-1.2
3,522,281	+				-0.7
3,522,281	+				-0.8
3,522,282	-				-0.4
3,522,282	-				+0.4
3,522,431	-		LRK53_RS16040	0.11	-0.6
3,522,431	-		LRK53_RS16040	0.11	-1.2
3,522,814	+		LRK53_RS16040	0.33	-0.6
3,522,814	+		LRK53_RS16040	0.33	+1.4
3,522,814	+		LRK53_RS16040	0.33	-0.2
3,522,815	-		LRK53_RS16040	0.33	+1.4
3,522,815	-		LRK53_RS16040	0.33	+0.4
3,522,990	+		LRK53_RS16040	0.42	+0.7
3,522,990	+		LRK53_RS16040	0.42	-2.3
3,522,990	+		LRK53_RS16040	0.42	+0.6
3,522,990	+		LRK53_RS16040	0.42	-0.8
3,522,990	+		LRK53_RS16040	0.42	+1.4
3,522,990	+		LRK53_RS16040	0.42	-1.2
3,522,990	+		LRK53_RS16040	0.42	-1.7
3,522,991	-		LRK53_RS16040	0.43	-0.7
3,523,075	+		LRK53_RS16040	0.47	+0.7
3,523,075	+		LRK53_RS16040	0.47	+0.4
3,523,075	+		LRK53_RS16040	0.47	+2.4
3,523,075	+		LRK53_RS16040	0.47	-0.8
3,523,076	-		LRK53_RS16040	0.47	-0.2
3,523,076	-		LRK53_RS16040	0.47	-1.2
3,523,076	-		LRK53_RS16040	0.47	+0.8
3,523,198	+		LRK53_RS16040	0.54	-0.6
3,523,198	+		LRK53_RS16040	0.54	+1.4
3,523,198	+		LRK53_RS16040	0.54	-1.4
3,523,198	+		LRK53_RS16040	0.54	+0.4
3,523,199	-		LRK53_RS16040	0.54	+0.4
3,523,199	-		LRK53_RS16040	0.54	-1.4
3,523,199	-		LRK53_RS16040	0.54	+1.4
3,523,345	+		LRK53_RS16040	0.62	+0.1
3,523,345	+		LRK53_RS16040	0.62	-0.9
3,523,345	+		LRK53_RS16040	0.62	-0.6
3,523,345	+		LRK53_RS16040	0.62	-1.4
3,523,346	-		LRK53_RS16040	0.62	+0.4
3,523,346	-		LRK53_RS16040	0.62	-0.6
3,523,346	-		LRK53_RS16040	0.62	-0.4
3,523,346	-		LRK53_RS16040	0.62	-1.5
3,523,346	-		LRK53_RS16040	0.62	+0.0
3,523,346	-		LRK53_RS16040	0.62	+0.6
3,523,346	-		LRK53_RS16040	0.62	+1.4
3,523,346	-		LRK53_RS16040	0.62	-0.2
3,523,495	+		LRK53_RS16040	0.71	-0.7
3,523,495	+		LRK53_RS16040	0.71	+0.4
3,523,496	-		LRK53_RS16040	0.71	+1.4
3,523,496	-		LRK53_RS16040	0.71	+2.4
3,523,496	-		LRK53_RS16040	0.71	-0.4
3,523,496	-		LRK53_RS16040	0.71	+0.4
3,523,510	+		LRK53_RS16040	0.72	+1.4
3,523,510	+		LRK53_RS16040	0.72	-1.0
3,523,510	+		LRK53_RS16040	0.72	-0.6
3,523,511	-		LRK53_RS16040	0.72	+3.0
3,523,511	-		LRK53_RS16040	0.72	-0.2
3,523,511	-		LRK53_RS16040	0.72	-0.2
3,523,511	-		LRK53_RS16040	0.72	+1.4
3,523,567	+		LRK53_RS16040	0.75	-0.2
3,523,567	+		LRK53_RS16040	0.75	+0.4
3,523,568	-		LRK53_RS16040	0.75	-0.6
3,523,568	-		LRK53_RS16040	0.75	-1.4
3,523,816	+		LRK53_RS16040	0.89	-0.4
3,523,816	+		LRK53_RS16040	0.89	+0.4
3,523,816	+		LRK53_RS16040	0.89	-0.2
3,523,816	+		LRK53_RS16040	0.89	-2.0
3,523,816	+		LRK53_RS16040	0.89	+2.4
3,523,816	+		LRK53_RS16040	0.89	-1.0
3,523,816	+		LRK53_RS16040	0.89	-1.0
3,523,816	+		LRK53_RS16040	0.89	-1.2
3,523,817	-		LRK53_RS16040	0.89	-0.2
3,523,822	+		LRK53_RS16040	0.89	-0.7
3,523,822	+		LRK53_RS16040	0.89	-0.2
3,523,822	+		LRK53_RS16040	0.89	+0.4
3,523,822	+		LRK53_RS16040	0.89	-0.2
3,523,822	+		LRK53_RS16040	0.89	+1.4
3,523,822	+		LRK53_RS16040	0.89	+0.4
3,523,822	+		LRK53_RS16040	0.89	+0.4
3,523,822	+		LRK53_RS16040	0.89	-0.6
3,523,822	+		LRK53_RS16040	0.89	-1.7
3,523,822	+		LRK53_RS16040	0.89	-0.7
3,523,822	+		LRK53_RS16040	0.89	-1.4
3,523,822	+		LRK53_RS16040	0.89	-1.9
3,523,822	+		LRK53_RS16040	0.89	+0.7
3,523,822	+		LRK53_RS16040	0.89	-0.9
3,523,823	-		LRK53_RS16040	0.89	-1.0
3,523,823	-		LRK53_RS16040	0.89	-0.6
3,523,823	-		LRK53_RS16040	0.89	-1.4
3,523,823	-		LRK53_RS16040	0.89	+2.4
3,523,823	-		LRK53_RS16040	0.89	+0.4
3,523,823	-		LRK53_RS16040	0.89	+1.4
3,523,823	-		LRK53_RS16040	0.89	-1.6
3,523,823	-		LRK53_RS16040	0.89	+0.4
3,523,823	-		LRK53_RS16040	0.89	-0.6
3,523,823	-		LRK53_RS16040	0.89	+0.4
3,523,823	-		LRK53_RS16040	0.89	-1.2
3,523,823	-		LRK53_RS16040	0.89	+3.0
3,523,823	-		LRK53_RS16040	0.89	+0.0
3,523,823	-		LRK53_RS16040	0.89	-0.2
3,523,823	-		LRK53_RS16040	0.89	-0.9
3,523,823	-		LRK53_RS16040	0.89	-1.4
3,523,825	+		LRK53_RS16040	0.89	-1.2
3,523,825	+		LRK53_RS16040	0.89	-0.4
3,523,825	+		LRK53_RS16040	0.89	+0.4
3,523,825	+		LRK53_RS16040	0.89	-0.6
3,523,826	-		LRK53_RS16040	0.89	+0.4
3,523,826	-		LRK53_RS16040	0.89	+2.7
3,523,826	-		LRK53_RS16040	0.89	-0.7
3,523,826	-		LRK53_RS16040	0.89	-1.7
3,523,834	+		LRK53_RS16040	0.90	-0.2
3,523,834	+		LRK53_RS16040	0.90	-0.8
3,523,834	+		LRK53_RS16040	0.90	-0.6
3,523,849	+				-0.9
3,523,849	+				-0.9
3,523,849	+				-0.8
3,523,849	+				+0.4
3,523,849	+				-0.7
3,523,850	-				+0.4
3,523,936	+				+0.8
3,523,936	+				-0.2
3,523,936	+				-0.7
3,523,936	+				-0.9
3,523,936	+				-1.5
3,523,936	+				-0.5
3,523,936	+				-0.0
3,523,936	+				-0.9
3,523,936	+				-0.5
3,523,937	-				+0.1
3,523,937	-				-1.4
3,523,952	+				+0.5
3,523,953	-				+0.4
3,523,953	-				-1.7
3,524,033	-				+0.1
3,524,124	+				+0.8
3,524,159	+				-0.3
3,524,159	+				-0.2
3,524,160	-				-1.3
3,524,160	-				-0.7
3,524,160	-				-0.6
3,524,210	+				-1.2
3,524,210	+				-0.9
3,524,210	+				+0.4
3,524,211	-				+0.4
3,524,211	-				+0.0
3,524,220	+				-1.2
3,524,220	+				+0.0
3,524,221	-				+0.4
3,524,283	+				-0.2
3,524,283	+				+0.4
3,524,283	+				-2.3
3,524,283	+				-1.3
3,524,284	-				-0.9
3,524,284	-				+0.1
3,524,284	-				-1.2
3,524,284	-				+1.4
3,524,284	-				+1.0
3,524,284	-				+0.4
3,524,284	-				-1.0
3,524,284	-				+0.4
3,524,328	+		LRK53_RS16045	0.13	-0.2
3,524,328	+		LRK53_RS16045	0.13	+1.4
3,524,328	+		LRK53_RS16045	0.13	-0.6
3,524,328	+		LRK53_RS16045	0.13	-1.4
3,524,328	+		LRK53_RS16045	0.13	-0.9
3,524,328	+		LRK53_RS16045	0.13	+0.8
3,524,329	-		LRK53_RS16045	0.13	-0.6
3,524,329	-		LRK53_RS16045	0.13	+0.4
3,524,329	-		LRK53_RS16045	0.13	-0.6
3,524,329	-		LRK53_RS16045	0.13	-0.1
3,524,329	-		LRK53_RS16045	0.13	+1.4
3,524,329	-		LRK53_RS16045	0.13	-0.9
3,524,329	-		LRK53_RS16045	0.13	-0.2
3,524,456	+		LRK53_RS16045	0.37	+0.3
3,524,456	+		LRK53_RS16045	0.37	+0.6
3,524,456	+		LRK53_RS16045	0.37	+0.1
3,524,456	+		LRK53_RS16045	0.37	-0.2
3,524,456	+		LRK53_RS16045	0.37	+0.4
3,524,456	+		LRK53_RS16045	0.37	+0.4
3,524,457	-		LRK53_RS16045	0.37	-0.6
3,524,457	-		LRK53_RS16045	0.37	+0.4
3,524,457	-		LRK53_RS16045	0.37	+1.4
3,524,457	-		LRK53_RS16045	0.37	+2.0
3,524,466	-		LRK53_RS16045	0.39	-0.7
3,524,466	-		LRK53_RS16045	0.39	+1.4
3,524,466	-		LRK53_RS16045	0.39	-0.3
3,524,476	+		LRK53_RS16045	0.41	+0.4
3,524,476	+		LRK53_RS16045	0.41	+1.4
3,524,476	+		LRK53_RS16045	0.41	-0.6
3,524,476	+		LRK53_RS16045	0.41	-0.6
3,524,476	+		LRK53_RS16045	0.41	-1.1
3,524,476	+		LRK53_RS16045	0.41	+0.7
3,524,477	-		LRK53_RS16045	0.41	-1.7
3,524,477	-		LRK53_RS16045	0.41	+0.1
3,524,489	+		LRK53_RS16045	0.43	-1.2
3,524,489	+		LRK53_RS16045	0.43	-0.2
3,524,489	+		LRK53_RS16045	0.43	-0.2
3,524,489	+		LRK53_RS16045	0.43	-0.4
3,524,489	+		LRK53_RS16045	0.43	-0.2
3,524,490	-		LRK53_RS16045	0.43	+1.4
3,524,490	-		LRK53_RS16045	0.43	+0.3
3,524,490	-		LRK53_RS16045	0.43	-0.9
3,524,490	-		LRK53_RS16045	0.43	+0.4
3,524,574	+		LRK53_RS16045	0.59	+0.4
3,524,574	+		LRK53_RS16045	0.59	+0.4
3,524,574	+		LRK53_RS16045	0.59	+1.4
3,524,575	-		LRK53_RS16045	0.60	-1.6
3,524,575	-		LRK53_RS16045	0.60	-0.2
3,524,575	-		LRK53_RS16045	0.60	+0.1
3,524,575	-		LRK53_RS16045	0.60	-0.7
3,524,619	+		LRK53_RS16045	0.68	+1.0
3,524,619	+		LRK53_RS16045	0.68	-1.3
3,524,619	+		LRK53_RS16045	0.68	-0.6
3,524,619	+		LRK53_RS16045	0.68	+1.0
3,524,619	+		LRK53_RS16045	0.68	+0.1
3,524,619	+		LRK53_RS16045	0.68	-1.2
3,524,619	+		LRK53_RS16045	0.68	-0.2
3,524,619	+		LRK53_RS16045	0.68	+2.0
3,524,619	+		LRK53_RS16045	0.68	+0.4
3,524,619	+		LRK53_RS16045	0.68	+0.1
3,524,619	+		LRK53_RS16045	0.68	-1.2
3,524,619	+		LRK53_RS16045	0.68	-1.8
3,524,619	+		LRK53_RS16045	0.68	+0.1
3,524,619	+		LRK53_RS16045	0.68	-0.4
3,524,619	+		LRK53_RS16045	0.68	-2.2
3,524,620	-		LRK53_RS16045	0.68	-0.7
3,524,620	-		LRK53_RS16045	0.68	-0.2
3,524,620	-		LRK53_RS16045	0.68	-1.2
3,524,620	-		LRK53_RS16045	0.68	+0.4
3,524,620	-		LRK53_RS16045	0.68	-1.4
3,524,620	-		LRK53_RS16045	0.68	+0.4
3,524,620	-		LRK53_RS16045	0.68	+0.4
3,524,620	-		LRK53_RS16045	0.68	-2.2
3,524,620	-		LRK53_RS16045	0.68	-0.2
3,524,620	-		LRK53_RS16045	0.68	-1.4
3,524,620	-		LRK53_RS16045	0.68	-0.9
3,524,620	-		LRK53_RS16045	0.68	-1.1
3,524,620	-		LRK53_RS16045	0.68	+0.1
3,524,784	+				-0.3
3,524,784	+				-0.9
3,524,784	+				-1.5
3,524,784	+				-0.2
3,524,784	+				+0.1
3,524,784	+				-0.2
3,524,785	-				-0.4
3,524,785	-				+1.4
3,524,785	-				+1.4
3,524,785	-				+0.1
3,524,785	-				+0.4
3,524,785	-				-0.2
3,524,785	-				-0.6
3,524,785	-				+0.4
3,524,785	-				-0.2
3,524,796	+				-1.2
3,524,796	+				-0.9
3,524,796	+				+0.8
3,524,796	+				-1.7
3,524,796	+				-0.7
3,524,829	+				-1.0
3,524,829	+				-1.2
3,524,829	+				-1.2
3,524,829	+				+0.7
3,524,829	+				-0.7
3,524,829	+				+0.0
3,524,830	-				+0.0
3,524,830	-				+0.8
3,524,830	-				-0.6
3,524,830	-				+0.4
3,524,830	-				-1.0
3,524,830	-				-0.6
3,524,830	-				+0.4