Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13455

Experiment: defined media with 20AA_mix

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with 20AA_mix
2,970,976	+		LRK53_RS13445	0.90	+1.5
2,970,976	+		LRK53_RS13445	0.90	-1.1
2,970,977	-				-1.7
2,971,068	+				-0.1
2,971,068	+				-2.1
2,971,068	+				-0.1
2,971,068	+				-0.1
2,971,068	+				-0.2
2,971,069	-				+1.0
2,971,069	-				-0.9
2,971,069	-				-1.1
2,971,069	-				+3.5
2,971,083	+				-1.3
2,971,083	+				-1.9
2,971,083	+				-2.8
2,971,084	-				+0.0
2,971,084	-				-1.4
2,971,084	-				-0.7
2,971,084	-				-2.3
2,971,084	-				-0.7
2,971,084	-				-0.1
2,971,341	+		LRK53_RS13450	0.35	-0.7
2,971,341	+		LRK53_RS13450	0.35	-0.7
2,971,341	+		LRK53_RS13450	0.35	-0.1
2,971,342	-		LRK53_RS13450	0.35	-0.1
2,971,342	-		LRK53_RS13450	0.35	+0.9
2,971,342	-		LRK53_RS13450	0.35	-0.7
2,971,342	-		LRK53_RS13450	0.35	-0.1
2,971,407	+		LRK53_RS13450	0.44	-1.4
2,971,407	+		LRK53_RS13450	0.44	-0.7
2,971,408	-		LRK53_RS13450	0.44	-1.1
2,971,408	-		LRK53_RS13450	0.44	-2.9
2,971,464	+		LRK53_RS13450	0.52	+0.2
2,971,464	+		LRK53_RS13450	0.52	-0.3
2,971,464	+		LRK53_RS13450	0.52	-1.3
2,971,464	+		LRK53_RS13450	0.52	-0.1
2,971,464	+		LRK53_RS13450	0.52	-1.1
2,971,464	+		LRK53_RS13450	0.52	-2.0
2,971,464	+		LRK53_RS13450	0.52	-0.1
2,971,464	+		LRK53_RS13450	0.52	+0.9
2,971,464	+		LRK53_RS13450	0.52	+0.9
2,971,464	+		LRK53_RS13450	0.52	-2.4
2,971,464	+		LRK53_RS13450	0.52	-0.7
2,971,464	+		LRK53_RS13450	0.52	-0.8
2,971,464	+		LRK53_RS13450	0.52	+0.9
2,971,464	+		LRK53_RS13450	0.52	-1.1
2,971,464	+		LRK53_RS13450	0.52	-2.4
2,971,464	+		LRK53_RS13450	0.52	-1.1
2,971,464	+		LRK53_RS13450	0.52	-0.1
2,971,464	+		LRK53_RS13450	0.52	-2.2
2,971,464	+		LRK53_RS13450	0.52	+0.9
2,971,464	+		LRK53_RS13450	0.52	-0.1
2,971,464	+		LRK53_RS13450	0.52	-0.7
2,971,464	+		LRK53_RS13450	0.52	-0.7
2,971,464	+		LRK53_RS13450	0.52	-0.1
2,971,464	+		LRK53_RS13450	0.52	-1.8
2,971,464	+		LRK53_RS13450	0.52	-0.1
2,971,464	+		LRK53_RS13450	0.52	+0.9
2,971,464	+		LRK53_RS13450	0.52	+0.9
2,971,464	+		LRK53_RS13450	0.52	-1.4
2,971,464	+		LRK53_RS13450	0.52	+0.9
2,971,464	+		LRK53_RS13450	0.52	-1.7
2,971,464	+		LRK53_RS13450	0.52	-1.1
2,971,464	+		LRK53_RS13450	0.52	-1.3
2,971,464	+		LRK53_RS13450	0.52	+0.9
2,971,464	+		LRK53_RS13450	0.52	-1.9
2,971,464	+		LRK53_RS13450	0.52	-1.1
2,971,465	-		LRK53_RS13450	0.52	-3.0
2,971,465	-		LRK53_RS13450	0.52	-1.6
2,971,465	-		LRK53_RS13450	0.52	+0.9
2,971,465	-		LRK53_RS13450	0.52	-1.4
2,971,465	-		LRK53_RS13450	0.52	+0.9
2,971,465	-		LRK53_RS13450	0.52	-1.8
2,971,465	-		LRK53_RS13450	0.52	+0.9
2,971,465	-		LRK53_RS13450	0.52	-1.7
2,971,465	-		LRK53_RS13450	0.52	+0.9
2,971,465	-		LRK53_RS13450	0.52	-0.1
2,971,465	-		LRK53_RS13450	0.52	-0.7
2,971,465	-		LRK53_RS13450	0.52	-0.1
2,971,465	-		LRK53_RS13450	0.52	-1.6
2,971,465	-		LRK53_RS13450	0.52	-0.1
2,971,465	-		LRK53_RS13450	0.52	+0.9
2,971,465	-		LRK53_RS13450	0.52	+0.9
2,971,465	-		LRK53_RS13450	0.52	-1.1
2,971,465	-		LRK53_RS13450	0.52	-1.7
2,971,465	-		LRK53_RS13450	0.52	-1.4
2,971,465	-		LRK53_RS13450	0.52	+0.9
2,971,599	+		LRK53_RS13450	0.70	-0.1
2,971,599	+		LRK53_RS13450	0.70	-0.1
2,971,599	+		LRK53_RS13450	0.70	-1.7
2,971,599	+		LRK53_RS13450	0.70	-0.7
2,971,600	-		LRK53_RS13450	0.70	-0.1
2,971,689	+		LRK53_RS13450	0.83	+0.9
2,971,859	+				-0.1
2,971,859	+				-1.1
2,971,859	+				-1.1
2,971,860	-				+1.5
2,971,860	-				-2.4
2,971,860	-				-0.1
2,971,935	+				-0.4
2,971,935	+				-1.6
2,971,935	+				-2.3
2,971,936	-				-0.5
2,971,936	-				-1.1
2,971,936	-				+0.9
2,971,977	+				-1.7
2,972,190	+		LRK53_RS13455	0.28	-0.6
2,972,192	+		LRK53_RS13455	0.28	-1.4
2,972,192	+		LRK53_RS13455	0.28	-1.5
2,972,192	+		LRK53_RS13455	0.28	-0.9
2,972,192	+		LRK53_RS13455	0.28	-1.4
2,972,192	+		LRK53_RS13455	0.28	-0.6
2,972,192	+		LRK53_RS13455	0.28	-0.1
2,972,192	+		LRK53_RS13455	0.28	-0.7
2,972,192	+		LRK53_RS13455	0.28	+0.2
2,972,192	+		LRK53_RS13455	0.28	+0.3
2,972,192	+		LRK53_RS13455	0.28	-1.4
2,972,193	-		LRK53_RS13455	0.28	-0.1
2,972,193	-		LRK53_RS13455	0.28	-2.1
2,972,193	-		LRK53_RS13455	0.28	-1.3
2,972,193	-		LRK53_RS13455	0.28	+0.9
2,972,193	-		LRK53_RS13455	0.28	+0.9
2,972,193	-		LRK53_RS13455	0.28	-1.8
2,972,193	-		LRK53_RS13455	0.28	-1.2
2,972,490	+		LRK53_RS13455	0.66	+0.9
2,972,490	+		LRK53_RS13455	0.66	-1.0
2,972,490	+		LRK53_RS13455	0.66	-1.1
2,972,490	+		LRK53_RS13455	0.66	-1.0
2,972,491	-		LRK53_RS13455	0.66	-1.1
2,972,491	-		LRK53_RS13455	0.66	-1.4
2,972,491	-		LRK53_RS13455	0.66	-2.3
2,972,491	-		LRK53_RS13455	0.66	-0.7
2,972,810	+				-0.7
2,972,810	+				-1.4
2,972,810	+				-1.8
2,972,810	+				+0.5
2,972,810	+				+0.5
2,972,810	+				-0.6
2,972,810	+				+0.9
2,972,811	-				-0.1
2,972,811	-				-0.1
2,972,811	-				-1.1
2,972,811	-				-1.8
2,972,906	+		LRK53_RS13460	0.12	+0.9
2,972,906	+		LRK53_RS13460	0.12	-1.4
2,972,906	+		LRK53_RS13460	0.12	-1.3
2,972,906	+		LRK53_RS13460	0.12	-1.3
2,972,906	+		LRK53_RS13460	0.12	+0.9
2,972,906	+		LRK53_RS13460	0.12	-0.0
2,972,906	+		LRK53_RS13460	0.12	-0.7
2,972,906	+		LRK53_RS13460	0.12	-1.2
2,972,906	+		LRK53_RS13460	0.12	+0.1
2,972,906	+		LRK53_RS13460	0.12	+0.9
2,972,906	+		LRK53_RS13460	0.12	+0.9
2,972,907	-		LRK53_RS13460	0.12	-0.1
2,972,907	-		LRK53_RS13460	0.12	-2.0
2,972,907	-		LRK53_RS13460	0.12	-2.7
2,972,907	-		LRK53_RS13460	0.12	-1.5
2,972,907	-		LRK53_RS13460	0.12	-0.1
2,972,907	-		LRK53_RS13460	0.12	-2.0
2,972,907	-		LRK53_RS13460	0.12	-1.1
2,972,907	-		LRK53_RS13460	0.12	-2.3
2,972,907	-		LRK53_RS13460	0.12	+0.1
2,972,907	-		LRK53_RS13460	0.12	-1.8
2,972,907	-		LRK53_RS13460	0.12	+0.9
2,972,907	-		LRK53_RS13460	0.12	-2.3
2,972,907	-		LRK53_RS13460	0.12	-0.1
2,972,907	-		LRK53_RS13460	0.12	+0.6
2,972,907	-		LRK53_RS13460	0.12	+0.3
2,972,957	+		LRK53_RS13460	0.18	-0.1
2,972,957	+		LRK53_RS13460	0.18	+0.9
2,972,957	+		LRK53_RS13460	0.18	+0.9
2,972,957	+		LRK53_RS13460	0.18	-0.3
2,972,957	+		LRK53_RS13460	0.18	-0.2
2,972,957	+		LRK53_RS13460	0.18	-1.1
2,972,957	+		LRK53_RS13460	0.18	-0.1
2,972,957	+		LRK53_RS13460	0.18	-0.8
2,972,957	+		LRK53_RS13460	0.18	-0.1
2,972,957	+		LRK53_RS13460	0.18	-1.0
2,972,957	+		LRK53_RS13460	0.18	-0.1
2,972,957	+		LRK53_RS13460	0.18	-0.4
2,972,958	-		LRK53_RS13460	0.18	-3.0
2,972,958	-		LRK53_RS13460	0.18	+0.3
2,972,958	-		LRK53_RS13460	0.18	+0.9
2,972,958	-		LRK53_RS13460	0.18	-1.5
2,972,958	-		LRK53_RS13460	0.18	+0.9
2,972,958	-		LRK53_RS13460	0.18	-2.1
2,972,958	-		LRK53_RS13460	0.18	+0.9
2,972,978	+		LRK53_RS13460	0.20	-0.4
2,972,978	+		LRK53_RS13460	0.20	-0.4
2,972,978	+		LRK53_RS13460	0.20	-1.9
2,972,978	+		LRK53_RS13460	0.20	+0.3
2,972,978	+		LRK53_RS13460	0.20	-1.1
2,972,978	+		LRK53_RS13460	0.20	-1.4
2,972,978	+		LRK53_RS13460	0.20	-1.7
2,972,978	+		LRK53_RS13460	0.20	-1.3
2,972,978	+		LRK53_RS13460	0.20	-1.1
2,972,978	+		LRK53_RS13460	0.20	-0.3
2,972,978	+		LRK53_RS13460	0.20	-1.1
2,972,978	+		LRK53_RS13460	0.20	-1.1
2,972,978	+		LRK53_RS13460	0.20	-0.8
2,972,978	+		LRK53_RS13460	0.20	-1.7
2,972,978	+		LRK53_RS13460	0.20	+0.4
2,972,979	-		LRK53_RS13460	0.20	+0.9
2,972,979	-		LRK53_RS13460	0.20	-0.7
2,972,979	-		LRK53_RS13460	0.20	+0.3
2,972,979	-		LRK53_RS13460	0.20	-0.1
2,972,979	-		LRK53_RS13460	0.20	-1.3
2,972,979	-		LRK53_RS13460	0.20	-0.7
2,972,979	-		LRK53_RS13460	0.20	+0.3
2,972,979	-		LRK53_RS13460	0.20	-0.4
2,972,979	-		LRK53_RS13460	0.20	-1.4
2,972,979	-		LRK53_RS13460	0.20	-0.1
2,972,979	-		LRK53_RS13460	0.20	-1.4
2,972,979	-		LRK53_RS13460	0.20	-0.4
2,972,979	-		LRK53_RS13460	0.20	-1.4
2,972,979	-		LRK53_RS13460	0.20	-0.4
2,972,979	-		LRK53_RS13460	0.20	-0.7
2,972,979	-		LRK53_RS13460	0.20	-2.3
2,972,979	-		LRK53_RS13460	0.20	-1.1
2,972,979	-		LRK53_RS13460	0.20	+1.3
2,972,979	-		LRK53_RS13460	0.20	-1.5
2,972,979	-		LRK53_RS13460	0.20	-1.6
2,972,979	-		LRK53_RS13460	0.20	-1.1
2,972,979	-		LRK53_RS13460	0.20	-0.4
2,972,979	-		LRK53_RS13460	0.20	+0.5
2,972,979	-		LRK53_RS13460	0.20	-0.7
2,972,979	-		LRK53_RS13460	0.20	+0.9
2,972,979	-		LRK53_RS13460	0.20	-2.7
2,972,979	-		LRK53_RS13460	0.20	-1.0
2,972,979	-		LRK53_RS13460	0.20	-1.9
2,972,979	-		LRK53_RS13460	0.20	-2.1
2,973,020	+		LRK53_RS13460	0.25	-0.6
2,973,020	+		LRK53_RS13460	0.25	-0.3
2,973,020	+		LRK53_RS13460	0.25	-1.1
2,973,020	+		LRK53_RS13460	0.25	-1.1
2,973,020	+		LRK53_RS13460	0.25	+0.9
2,973,020	+		LRK53_RS13460	0.25	-1.7
2,973,020	+		LRK53_RS13460	0.25	-2.3
2,973,021	-		LRK53_RS13460	0.25	-1.4
2,973,021	-		LRK53_RS13460	0.25	-0.8
2,973,021	-		LRK53_RS13460	0.25	-0.9
2,973,021	-		LRK53_RS13460	0.25	+0.3
2,973,021	-		LRK53_RS13460	0.25	-0.1
2,973,021	-		LRK53_RS13460	0.25	-0.2
2,973,249	+		LRK53_RS13460	0.50	-0.1
2,973,249	+		LRK53_RS13460	0.50	-1.7
2,973,249	+		LRK53_RS13460	0.50	-0.7
2,973,249	+		LRK53_RS13460	0.50	-1.7
2,973,249	+		LRK53_RS13460	0.50	-1.9
2,973,250	-		LRK53_RS13460	0.50	-0.4
2,973,250	-		LRK53_RS13460	0.50	-0.7
2,973,250	-		LRK53_RS13460	0.50	-0.5
2,973,289	+		LRK53_RS13460	0.55	-0.1
2,973,289	+		LRK53_RS13460	0.55	-0.1
2,973,289	+		LRK53_RS13460	0.55	-0.1
2,973,289	+		LRK53_RS13460	0.55	-0.1
2,973,289	+		LRK53_RS13460	0.55	-1.4
2,973,289	+		LRK53_RS13460	0.55	+0.9
2,973,290	-		LRK53_RS13460	0.55	-1.6
2,973,290	-		LRK53_RS13460	0.55	-0.7
2,973,290	-		LRK53_RS13460	0.55	+0.3
2,973,290	-		LRK53_RS13460	0.55	-1.1
2,973,290	-		LRK53_RS13460	0.55	-0.1
2,973,290	-		LRK53_RS13460	0.55	-0.7
2,973,293	+		LRK53_RS13460	0.55	+0.9
2,973,293	+		LRK53_RS13460	0.55	-0.7
2,973,293	+		LRK53_RS13460	0.55	-0.1
2,973,293	+		LRK53_RS13460	0.55	-0.2
2,973,293	+		LRK53_RS13460	0.55	-0.1
2,973,293	+		LRK53_RS13460	0.55	+0.2
2,973,293	+		LRK53_RS13460	0.55	+0.9
2,973,293	+		LRK53_RS13460	0.55	-1.9
2,973,293	+		LRK53_RS13460	0.55	-1.1
2,973,293	+		LRK53_RS13460	0.55	+0.9
2,973,293	+		LRK53_RS13460	0.55	-0.7
2,973,293	+		LRK53_RS13460	0.55	-1.4
2,973,293	+		LRK53_RS13460	0.55	+0.2
2,973,293	+		LRK53_RS13460	0.55	-0.1
2,973,293	+		LRK53_RS13460	0.55	-1.2
2,973,294	-		LRK53_RS13460	0.55	-0.5
2,973,294	-		LRK53_RS13460	0.55	-2.1
2,973,294	-		LRK53_RS13460	0.55	-0.1
2,973,294	-		LRK53_RS13460	0.55	-1.1
2,973,294	-		LRK53_RS13460	0.55	+0.6
2,973,294	-		LRK53_RS13460	0.55	-0.7
2,973,623	+				-0.1
2,973,623	+				-0.7
2,973,623	+				+0.9
2,973,623	+				-1.1
2,973,623	+				-0.6
2,973,623	+				+0.9
2,973,623	+				-1.1
2,973,623	+				-1.0
2,973,623	+				+0.3
2,973,623	+				+2.5
2,973,623	+				-0.1
2,973,623	+				-0.7
2,973,623	+				-0.1
2,973,623	+				-2.1
2,973,623	+				-0.1
2,973,623	+				-1.1
2,973,624	-				-0.1
2,973,624	-				-0.1
2,973,624	-				-0.3
2,973,624	-				-1.1
2,973,624	-				-1.2
2,973,624	-				-0.7
2,973,624	-				-0.7
2,973,624	-				-1.1
2,973,624	-				-1.4
2,973,624	-				-1.9
2,973,624	-				-0.7
2,973,624	-				+0.2
2,973,624	-				-0.7
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