Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13375

Experiment: defined media with 20AA_mix

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with 20AA_mix
2,954,958	+		LRK53_RS13370	0.77	-2.1
2,954,958	+		LRK53_RS13370	0.77	-0.7
2,954,958	+		LRK53_RS13370	0.77	+0.3
2,954,958	+		LRK53_RS13370	0.77	-0.1
2,954,958	+		LRK53_RS13370	0.77	+0.5
2,954,959	-		LRK53_RS13370	0.77	-0.1
2,954,959	-		LRK53_RS13370	0.77	-0.3
2,954,959	-		LRK53_RS13370	0.77	+0.3
2,954,959	-		LRK53_RS13370	0.77	+0.9
2,954,959	-		LRK53_RS13370	0.77	-2.1
2,954,959	-		LRK53_RS13370	0.77	-0.7
2,955,006	+		LRK53_RS13370	0.79	-1.1
2,955,006	+		LRK53_RS13370	0.79	-2.1
2,955,006	+		LRK53_RS13370	0.79	+0.9
2,955,006	+		LRK53_RS13370	0.79	+0.9
2,955,006	+		LRK53_RS13370	0.79	-0.4
2,955,007	-		LRK53_RS13370	0.79	-0.1
2,955,007	-		LRK53_RS13370	0.79	-0.4
2,955,007	-		LRK53_RS13370	0.79	-0.7
2,955,007	-		LRK53_RS13370	0.79	-1.2
2,955,007	-		LRK53_RS13370	0.79	+0.4
2,955,007	-		LRK53_RS13370	0.79	-1.9
2,955,007	-		LRK53_RS13370	0.79	+0.9
2,955,154	+		LRK53_RS13370	0.84	-0.1
2,955,154	+		LRK53_RS13370	0.84	-0.4
2,955,154	+		LRK53_RS13370	0.84	-0.2
2,955,154	+		LRK53_RS13370	0.84	-1.2
2,955,154	+		LRK53_RS13370	0.84	-0.1
2,955,154	+		LRK53_RS13370	0.84	-0.9
2,955,154	+		LRK53_RS13370	0.84	+0.6
2,955,154	+		LRK53_RS13370	0.84	-0.1
2,955,154	+		LRK53_RS13370	0.84	+0.2
2,955,154	+		LRK53_RS13370	0.84	-1.4
2,955,154	+		LRK53_RS13370	0.84	+0.0
2,955,154	+		LRK53_RS13370	0.84	-0.7
2,955,154	+		LRK53_RS13370	0.84	-1.7
2,955,154	+		LRK53_RS13370	0.84	+0.9
2,955,154	+		LRK53_RS13370	0.84	-0.1
2,955,154	+		LRK53_RS13370	0.84	-1.4
2,955,154	+		LRK53_RS13370	0.84	+0.9
2,955,154	+		LRK53_RS13370	0.84	+1.9
2,955,154	+		LRK53_RS13370	0.84	-0.1
2,955,154	+		LRK53_RS13370	0.84	-0.5
2,955,154	+		LRK53_RS13370	0.84	-0.4
2,955,154	+		LRK53_RS13370	0.84	-0.1
2,955,154	+		LRK53_RS13370	0.84	-0.9
2,955,154	+		LRK53_RS13370	0.84	+0.9
2,955,154	+		LRK53_RS13370	0.84	-0.7
2,955,154	-		LRK53_RS13370	0.84	-1.7
2,955,155	-		LRK53_RS13370	0.84	-0.1
2,955,155	-		LRK53_RS13370	0.84	-2.1
2,955,155	-		LRK53_RS13370	0.84	-0.7
2,955,155	-		LRK53_RS13370	0.84	-1.1
2,955,155	-		LRK53_RS13370	0.84	-1.0
2,955,155	-		LRK53_RS13370	0.84	+0.3
2,955,155	-		LRK53_RS13370	0.84	-0.8
2,955,155	-		LRK53_RS13370	0.84	-1.6
2,955,155	-		LRK53_RS13370	0.84	+1.9
2,955,155	-		LRK53_RS13370	0.84	+0.9
2,955,155	-		LRK53_RS13370	0.84	+0.2
2,955,155	-		LRK53_RS13370	0.84	+0.2
2,955,155	-		LRK53_RS13370	0.84	-1.7
2,955,155	-		LRK53_RS13370	0.84	-1.1
2,955,155	-		LRK53_RS13370	0.84	+0.6
2,955,155	-		LRK53_RS13370	0.84	+0.3
2,955,155	-		LRK53_RS13370	0.84	-2.0
2,955,155	-		LRK53_RS13370	0.84	-1.5
2,955,155	-		LRK53_RS13370	0.84	+0.2
2,955,155	-		LRK53_RS13370	0.84	-0.1
2,955,155	-		LRK53_RS13370	0.84	+0.9
2,955,155	-		LRK53_RS13370	0.84	-1.9
2,955,155	-		LRK53_RS13370	0.84	-1.9
2,955,155	-		LRK53_RS13370	0.84	-1.0
2,955,155	-		LRK53_RS13370	0.84	-0.7
2,955,294	+		LRK53_RS13370	0.89	+0.9
2,955,294	+		LRK53_RS13370	0.89	-1.2
2,955,294	+		LRK53_RS13370	0.89	-1.4
2,955,294	+		LRK53_RS13370	0.89	-2.3
2,955,294	+		LRK53_RS13370	0.89	-0.2
2,955,294	+		LRK53_RS13370	0.89	-1.6
2,955,294	+		LRK53_RS13370	0.89	-2.1
2,955,294	+		LRK53_RS13370	0.89	-0.9
2,955,295	-		LRK53_RS13370	0.89	-1.1
2,955,295	-		LRK53_RS13370	0.89	-0.7
2,955,295	-		LRK53_RS13370	0.89	-2.1
2,955,295	-		LRK53_RS13370	0.89	-2.0
2,955,295	-		LRK53_RS13370	0.89	-1.7
2,955,387	+				+0.3
2,955,388	-				-0.7
2,955,388	-				-0.5
2,955,388	-				-1.4
2,955,388	-				-1.4
2,955,410	-				+0.9
2,955,418	+				-0.1
2,955,419	-				+0.3
2,955,666	+				+0.0
2,955,666	+				-1.7
2,955,667	-				-0.4
2,955,667	-				-0.4
2,955,667	-				-0.4
2,955,784	+				-1.0
2,955,785	-				-0.1
2,955,785	-				-2.0
2,955,785	-				+0.7
2,956,300	+		LRK53_RS13375	0.38	-1.9
2,956,300	+		LRK53_RS13375	0.38	-0.9
2,956,300	+		LRK53_RS13375	0.38	-1.4
2,956,301	-		LRK53_RS13375	0.39	-1.1
2,956,301	-		LRK53_RS13375	0.39	-1.0
2,956,348	+		LRK53_RS13375	0.43	-3.0
2,956,348	+		LRK53_RS13375	0.43	-2.1
2,956,348	+		LRK53_RS13375	0.43	-0.3
2,956,348	+		LRK53_RS13375	0.43	-3.1
2,956,348	+		LRK53_RS13375	0.43	-0.9
2,956,348	+		LRK53_RS13375	0.43	-3.4
2,956,348	+		LRK53_RS13375	0.43	-0.9
2,956,348	+		LRK53_RS13375	0.43	-1.9
2,956,348	+		LRK53_RS13375	0.43	-1.8
2,956,348	+		LRK53_RS13375	0.43	-2.1
2,956,348	+		LRK53_RS13375	0.43	-1.1
2,956,348	+		LRK53_RS13375	0.43	-1.1
2,956,348	+		LRK53_RS13375	0.43	-2.1
2,956,348	+		LRK53_RS13375	0.43	-2.2
2,956,348	+		LRK53_RS13375	0.43	-2.4
2,956,348	+		LRK53_RS13375	0.43	-1.1
2,956,348	+		LRK53_RS13375	0.43	-0.5
2,956,348	+		LRK53_RS13375	0.43	-1.4
2,956,348	+		LRK53_RS13375	0.43	-1.9
2,956,348	+		LRK53_RS13375	0.43	-2.1
2,956,348	+		LRK53_RS13375	0.43	-2.1
2,956,348	+		LRK53_RS13375	0.43	+0.2
2,956,348	+		LRK53_RS13375	0.43	-1.7
2,956,348	+		LRK53_RS13375	0.43	+0.9
2,956,348	+		LRK53_RS13375	0.43	-2.3
2,956,349	-		LRK53_RS13375	0.43	-1.2
2,956,349	-		LRK53_RS13375	0.43	-1.5
2,956,349	-		LRK53_RS13375	0.43	-2.3
2,956,349	-		LRK53_RS13375	0.43	-2.5
2,956,349	-		LRK53_RS13375	0.43	-1.1
2,956,349	-		LRK53_RS13375	0.43	-0.7
2,956,349	-		LRK53_RS13375	0.43	-0.4
2,956,349	-		LRK53_RS13375	0.43	-1.8
2,956,349	-		LRK53_RS13375	0.43	+1.5
2,956,349	-		LRK53_RS13375	0.43	-1.9
2,956,349	-		LRK53_RS13375	0.43	-1.5
2,956,349	-		LRK53_RS13375	0.43	-1.2
2,956,349	-		LRK53_RS13375	0.43	-3.0
2,956,349	-		LRK53_RS13375	0.43	-3.4
2,956,349	-		LRK53_RS13375	0.43	-0.6
2,956,349	-		LRK53_RS13375	0.43	-1.7
2,956,349	-		LRK53_RS13375	0.43	-2.4
2,956,349	-		LRK53_RS13375	0.43	-0.8
2,956,349	-		LRK53_RS13375	0.43	-2.3
2,956,349	-		LRK53_RS13375	0.43	-0.4
2,956,349	-		LRK53_RS13375	0.43	-1.7
2,956,349	-		LRK53_RS13375	0.43	-1.9
2,956,349	-		LRK53_RS13375	0.43	-2.6
2,956,349	-		LRK53_RS13375	0.43	-2.8
2,956,349	-		LRK53_RS13375	0.43	-1.3
2,956,349	-		LRK53_RS13375	0.43	-1.4
2,956,349	-		LRK53_RS13375	0.43	-0.6
2,956,349	-		LRK53_RS13375	0.43	-1.9
2,956,349	-		LRK53_RS13375	0.43	-0.7
2,956,590	+		LRK53_RS13375	0.63	-0.8
2,956,590	+		LRK53_RS13375	0.63	-0.3
2,956,590	+		LRK53_RS13375	0.63	-0.8
2,956,590	+		LRK53_RS13375	0.63	-0.9
2,956,590	+		LRK53_RS13375	0.63	+0.1
2,956,590	+		LRK53_RS13375	0.63	-1.4
2,956,590	+		LRK53_RS13375	0.63	-1.9
2,956,591	-		LRK53_RS13375	0.63	-2.1
2,956,591	-		LRK53_RS13375	0.63	-2.0
2,956,591	-		LRK53_RS13375	0.63	-2.6
2,956,591	-		LRK53_RS13375	0.63	-2.4
2,956,591	-		LRK53_RS13375	0.63	-0.8
2,956,591	-		LRK53_RS13375	0.63	-3.0
2,956,591	-		LRK53_RS13375	0.63	-2.1
2,956,591	-		LRK53_RS13375	0.63	-2.4
2,956,591	-		LRK53_RS13375	0.63	-0.7
2,956,591	-		LRK53_RS13375	0.63	-0.1
2,956,591	-		LRK53_RS13375	0.63	-1.7
2,956,591	-		LRK53_RS13375	0.63	-0.7
2,956,742	+		LRK53_RS13375	0.76	-2.9
2,956,742	+		LRK53_RS13375	0.76	-0.4
2,956,742	+		LRK53_RS13375	0.76	-2.1
2,956,742	+		LRK53_RS13375	0.76	-0.1
2,956,742	+		LRK53_RS13375	0.76	+1.9
2,956,742	+		LRK53_RS13375	0.76	-0.1
2,956,742	+		LRK53_RS13375	0.76	-2.1
2,956,742	+		LRK53_RS13375	0.76	-0.7
2,956,742	+		LRK53_RS13375	0.76	-0.8
2,956,742	+		LRK53_RS13375	0.76	-1.4
2,956,742	+		LRK53_RS13375	0.76	-2.2
2,956,742	+		LRK53_RS13375	0.76	-0.1
2,956,743	-		LRK53_RS13375	0.76	-2.1
2,956,743	-		LRK53_RS13375	0.76	-0.7
2,956,743	-		LRK53_RS13375	0.76	-1.1
2,956,743	-		LRK53_RS13375	0.76	-1.4
2,956,743	-		LRK53_RS13375	0.76	-0.8
2,956,743	-		LRK53_RS13375	0.76	-0.7
2,956,743	-		LRK53_RS13375	0.76	-1.8
2,956,743	-		LRK53_RS13375	0.76	-0.7
2,956,743	-		LRK53_RS13375	0.76	-2.9
2,956,743	-		LRK53_RS13375	0.76	-0.2
2,956,743	-		LRK53_RS13375	0.76	+0.3
2,956,743	-		LRK53_RS13375	0.76	-1.7
2,956,743	-		LRK53_RS13375	0.76	-3.8
2,957,029	+				+0.3
2,957,060	+				-0.1
2,957,060	+				+1.9
2,957,060	+				-0.1
2,957,060	+				+0.3
2,957,060	+				-0.4
2,957,060	+				-1.3
2,957,060	+				+0.3
2,957,060	+				+0.3
2,957,060	+				-2.9
2,957,061	-				-1.0
2,957,091	+				-1.1
2,957,091	+				-1.9
2,957,091	+				-1.4
2,957,091	+				-0.6
2,957,092	-				-1.1
2,957,092	-				-2.3
2,957,094	+				-0.4
2,957,094	+				+0.9
2,957,095	-				-0.4
2,957,115	+				-0.4
2,957,115	+				-1.4
2,957,115	+				-0.1
2,957,115	+				-0.8
2,957,115	+				+0.5
2,957,115	+				-0.7
2,957,115	+				-1.4
2,957,115	+				-1.1
2,957,115	+				-0.1
2,957,115	+				-0.3
2,957,115	+				-0.7
2,957,115	+				-2.2
2,957,115	+				+0.9
2,957,115	+				+0.3
2,957,115	+				+0.9
2,957,115	+				-1.9
2,957,115	+				-1.3
2,957,115	+				-0.9
2,957,116	-				-0.7
2,957,116	-				-0.3
2,957,116	-				-2.3
2,957,116	-				-1.4
2,957,116	-				+0.3
2,957,116	-				-0.5
2,957,116	-				-2.1
2,957,116	-				-1.1
2,957,146	+				-1.1
2,957,146	+				-0.3
2,957,149	+				-1.0
2,957,149	+				-0.1
2,957,149	+				+0.5
2,957,149	+				-0.1
2,957,149	+				-0.9
2,957,149	+				-1.3
2,957,149	+				-0.4
2,957,150	-				-0.4
2,957,150	-				-1.0
2,957,150	-				-0.7
2,957,150	-				-0.1
2,957,152	+				-0.7
2,957,152	+				-2.6
2,957,152	+				-0.4
2,957,152	+				-1.6
2,957,152	+				+0.5
2,957,152	+				-0.4
2,957,152	+				+0.9
2,957,152	+				-1.3
2,957,152	+				-1.9
2,957,153	-				-1.1
2,957,153	-				-0.1
2,957,153	-				-0.1
2,957,153	-				-0.4
2,957,153	-				-0.1
2,957,153	-				-1.4
2,957,153	-				+0.3
2,957,153	-				-1.4
2,957,206	+				-1.7
2,957,206	+				-1.1
2,957,207	-				-2.6
2,957,211	+				-1.7
2,957,211	+				+0.3
2,957,212	-				+0.9
2,957,317	+		LRK53_RS13380	0.33	+0.3
2,957,318	-		LRK53_RS13380	0.33	-0.4
2,957,464	+		LRK53_RS13380	0.72	+0.9
2,957,464	+		LRK53_RS13380	0.72	-1.7
2,957,464	+		LRK53_RS13380	0.72	-1.1
2,957,464	+		LRK53_RS13380	0.72	+1.5
2,957,465	-		LRK53_RS13380	0.72	-1.1
2,957,465	-		LRK53_RS13380	0.72	-0.4
2,957,465	-		LRK53_RS13380	0.72	-0.1
2,957,465	-		LRK53_RS13380	0.72	-1.1
2,957,465	-		LRK53_RS13380	0.72	+0.9
2,957,673	+				+0.5
2,957,966	+		LRK53_RS13385	0.15	+0.9
2,957,966	+		LRK53_RS13385	0.15	+0.0
2,957,966	+		LRK53_RS13385	0.15	-1.1
2,957,966	+		LRK53_RS13385	0.15	-1.1
2,957,966	+		LRK53_RS13385	0.15	-1.1
2,957,966	+		LRK53_RS13385	0.15	-1.9
2,957,966	+		LRK53_RS13385	0.15	-0.9
2,957,966	+		LRK53_RS13385	0.15	-1.1
2,957,966	+		LRK53_RS13385	0.15	-0.3
2,957,966	+		LRK53_RS13385	0.15	+0.4
2,957,966	+		LRK53_RS13385	0.15	-1.0
2,957,966	+		LRK53_RS13385	0.15	-0.7
2,957,966	+		LRK53_RS13385	0.15	+0.9
2,957,966	+		LRK53_RS13385	0.15	-2.3
2,957,966	+		LRK53_RS13385	0.15	+0.5
2,957,966	+		LRK53_RS13385	0.15	-1.1
2,957,966	+		LRK53_RS13385	0.15	-1.4
2,957,966	+		LRK53_RS13385	0.15	-1.4
2,957,966	+		LRK53_RS13385	0.15	-1.4
2,957,966	+		LRK53_RS13385	0.15	+0.5
2,957,967	-		LRK53_RS13385	0.15	-0.7
2,957,967	-		LRK53_RS13385	0.15	+1.3
2,957,967	-		LRK53_RS13385	0.15	-0.1
2,957,967	-		LRK53_RS13385	0.15	-1.1
2,957,967	-		LRK53_RS13385	0.15	-1.4
2,957,967	-		LRK53_RS13385	0.15	+0.9
2,957,967	-		LRK53_RS13385	0.15	-0.1
2,957,967	-		LRK53_RS13385	0.15	-0.7
2,957,967	-		LRK53_RS13385	0.15	-1.7
2,957,967	-		LRK53_RS13385	0.15	-1.1
2,957,967	-		LRK53_RS13385	0.15	-1.7
2,957,967	-		LRK53_RS13385	0.15	-0.4
2,957,967	-		LRK53_RS13385	0.15	-0.4
2,957,967	-		LRK53_RS13385	0.15	-2.0