Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS11210

Experiment: defined media with 20AA_mix

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with 20AA_mix
2,499,850	-				-2.2
2,499,850	-				-0.8
2,499,850	-				-0.2
2,499,850	-				-0.8
2,499,898	-				-0.2
2,499,898	-				-0.5
2,499,923	-				-1.0
2,499,930	-				-2.8
2,499,930	-				-1.1
2,499,930	-				-0.2
2,499,930	-				-1.7
2,499,930	-				-1.5
2,499,930	-				-1.7
2,499,930	-				-1.7
2,499,930	-				-2.0
2,499,930	-				-1.5
2,499,990	-				+0.1
2,500,072	+				-0.2
2,500,073	-				-1.6
2,500,173	+		LRK53_RS11205	0.23	-0.5
2,500,173	+		LRK53_RS11205	0.23	+0.8
2,500,173	+		LRK53_RS11205	0.23	-0.2
2,500,173	+		LRK53_RS11205	0.23	-0.2
2,500,174	-		LRK53_RS11205	0.23	-0.7
2,500,174	-		LRK53_RS11205	0.23	+0.1
2,500,174	-		LRK53_RS11205	0.23	-1.5
2,500,174	-		LRK53_RS11205	0.23	-0.4
2,500,174	-		LRK53_RS11205	0.23	-1.2
2,500,174	-		LRK53_RS11205	0.23	-0.2
2,500,400	+		LRK53_RS11205	0.59	-0.8
2,500,428	+		LRK53_RS11205	0.64	-0.8
2,500,428	+		LRK53_RS11205	0.64	-0.2
2,500,428	+		LRK53_RS11205	0.64	-1.2
2,500,428	+		LRK53_RS11205	0.64	-1.5
2,500,428	+		LRK53_RS11205	0.64	+0.2
2,500,428	+		LRK53_RS11205	0.64	-2.4
2,500,429	-		LRK53_RS11205	0.64	-1.7
2,500,429	-		LRK53_RS11205	0.64	-0.8
2,500,429	-		LRK53_RS11205	0.64	-1.4
2,500,429	-		LRK53_RS11205	0.64	-0.8
2,500,429	-		LRK53_RS11205	0.64	-1.1
2,500,429	-		LRK53_RS11205	0.64	-1.5
2,500,429	-		LRK53_RS11205	0.64	-0.3
2,500,429	-		LRK53_RS11205	0.64	-2.0
2,500,429	-		LRK53_RS11205	0.64	-0.8
2,500,429	-		LRK53_RS11205	0.64	-1.2
2,500,500	+		LRK53_RS11205	0.75	-0.9
2,500,500	+		LRK53_RS11205	0.75	-0.5
2,500,500	+		LRK53_RS11205	0.75	-0.8
2,500,501	-		LRK53_RS11205	0.75	+1.8
2,500,501	-		LRK53_RS11205	0.75	-1.6
2,500,501	-		LRK53_RS11205	0.75	-1.7
2,500,501	-		LRK53_RS11205	0.75	-0.5
2,500,501	-		LRK53_RS11205	0.75	-0.9
2,500,501	-		LRK53_RS11205	0.75	-0.7
2,500,705	+				-0.2
2,500,705	+				-0.8
2,500,705	+				-0.8
2,500,705	+				+0.8
2,500,705	+				+1.4
2,500,705	+				-0.2
2,500,705	+				-2.0
2,500,705	+				-0.2
2,500,705	+				-0.8
2,500,705	+				-0.2
2,500,705	+				-0.2
2,500,705	+				-1.7
2,500,706	-				-1.2
2,500,706	-				+0.4
2,500,706	-				+1.4
2,500,706	-				-0.2
2,500,706	-				+0.4
2,500,706	-				-0.2
2,500,706	-				-0.3
2,500,706	-				-2.5
2,500,706	-				-0.8
2,500,706	-				+0.2
2,500,706	-				+0.2
2,500,706	-				+0.2
2,500,706	-				-1.3
2,500,706	-				-2.2
2,500,706	-				+0.6
2,500,706	-				-1.2
2,500,942	+		LRK53_RS11210	0.10	+0.3
2,500,942	+		LRK53_RS11210	0.10	+1.8
2,500,942	+		LRK53_RS11210	0.10	-1.5
2,500,942	+		LRK53_RS11210	0.10	-0.8
2,500,942	+		LRK53_RS11210	0.10	+0.8
2,500,942	+		LRK53_RS11210	0.10	-2.4
2,500,942	+		LRK53_RS11210	0.10	-0.8
2,500,942	+		LRK53_RS11210	0.10	-0.2
2,500,942	+		LRK53_RS11210	0.10	-1.0
2,500,943	-		LRK53_RS11210	0.10	-0.8
2,500,943	-		LRK53_RS11210	0.10	-2.8
2,500,943	-		LRK53_RS11210	0.10	-0.2
2,500,943	-		LRK53_RS11210	0.10	-0.6
2,500,943	-		LRK53_RS11210	0.10	-2.0
2,500,943	-		LRK53_RS11210	0.10	-0.5
2,500,943	-		LRK53_RS11210	0.10	-0.2
2,500,943	-		LRK53_RS11210	0.10	+0.8
2,500,943	-		LRK53_RS11210	0.10	-1.2
2,500,943	-		LRK53_RS11210	0.10	-0.2
2,500,943	-		LRK53_RS11210	0.10	-0.8
2,500,943	-		LRK53_RS11210	0.10	-0.3
2,500,943	-		LRK53_RS11210	0.10	+1.8
2,501,027	-		LRK53_RS11210	0.14	+0.1
2,501,097	+		LRK53_RS11210	0.17	+0.8
2,501,097	+		LRK53_RS11210	0.17	-0.2
2,501,097	+		LRK53_RS11210	0.17	-2.0
2,501,097	+		LRK53_RS11210	0.17	-0.9
2,501,098	-		LRK53_RS11210	0.17	-0.4
2,501,098	-		LRK53_RS11210	0.17	-1.5
2,501,098	-		LRK53_RS11210	0.17	-0.8
2,501,098	-		LRK53_RS11210	0.17	-0.2
2,501,098	-		LRK53_RS11210	0.17	-0.2
2,501,098	-		LRK53_RS11210	0.17	-1.5
2,501,098	-		LRK53_RS11210	0.17	-1.3
2,501,170	+		LRK53_RS11210	0.20	-0.8
2,501,170	+		LRK53_RS11210	0.20	-1.0
2,501,171	-		LRK53_RS11210	0.20	-0.2
2,501,171	-		LRK53_RS11210	0.20	+0.8
2,501,171	-		LRK53_RS11210	0.20	+0.8
2,501,171	-		LRK53_RS11210	0.20	-2.2
2,501,422	+		LRK53_RS11210	0.31	-1.0
2,501,422	+		LRK53_RS11210	0.31	+0.4
2,501,422	+		LRK53_RS11210	0.31	+0.1
2,501,422	+		LRK53_RS11210	0.31	-0.6
2,501,422	+		LRK53_RS11210	0.31	-1.4
2,501,423	-		LRK53_RS11210	0.31	+0.8
2,501,423	-		LRK53_RS11210	0.31	+1.1
2,501,423	-		LRK53_RS11210	0.31	-0.9
2,501,423	-		LRK53_RS11210	0.31	-2.2
2,501,423	-		LRK53_RS11210	0.31	-0.8
2,501,423	-		LRK53_RS11210	0.31	+0.5
2,501,512	+		LRK53_RS11210	0.34	-0.6
2,501,512	+		LRK53_RS11210	0.34	+0.1
2,501,512	+		LRK53_RS11210	0.34	-0.2
2,501,513	-		LRK53_RS11210	0.34	+0.2
2,501,513	-		LRK53_RS11210	0.34	+0.8
2,501,588	-		LRK53_RS11210	0.37	-1.2
2,501,638	+		LRK53_RS11210	0.40	-0.8
2,501,638	+		LRK53_RS11210	0.40	-0.2
2,501,783	-		LRK53_RS11210	0.46	-1.2
2,501,783	-		LRK53_RS11210	0.46	+2.4
2,501,783	-		LRK53_RS11210	0.46	-1.0
2,501,791	+		LRK53_RS11210	0.46	-2.6
2,501,791	+		LRK53_RS11210	0.46	-0.5
2,501,791	+		LRK53_RS11210	0.46	-1.1
2,501,792	-		LRK53_RS11210	0.46	+0.2
2,501,792	-		LRK53_RS11210	0.46	-0.8
2,501,851	+		LRK53_RS11210	0.48	-1.5
2,501,852	-		LRK53_RS11210	0.49	-0.8
2,502,065	-		LRK53_RS11210	0.57	-0.8
2,502,278	+		LRK53_RS11210	0.66	+0.1
2,502,278	+		LRK53_RS11210	0.66	+0.8
2,502,278	+		LRK53_RS11210	0.66	-0.2
2,502,279	-		LRK53_RS11210	0.66	+0.8
2,502,514	+		LRK53_RS11210	0.76	-0.2
2,502,514	+		LRK53_RS11210	0.76	-0.9
2,502,514	+		LRK53_RS11210	0.76	+1.8
2,502,514	+		LRK53_RS11210	0.76	-1.0
2,502,514	+		LRK53_RS11210	0.76	-0.0
2,502,514	+		LRK53_RS11210	0.76	-0.4
2,502,514	+		LRK53_RS11210	0.76	-0.2
2,502,514	+		LRK53_RS11210	0.76	-0.2
2,502,514	+		LRK53_RS11210	0.76	-1.2
2,502,514	+		LRK53_RS11210	0.76	-0.8
2,502,514	+		LRK53_RS11210	0.76	-1.3
2,502,515	-		LRK53_RS11210	0.76	-1.5
2,502,515	-		LRK53_RS11210	0.76	-0.2
2,502,515	-		LRK53_RS11210	0.76	-1.2
2,502,515	-		LRK53_RS11210	0.76	-1.8
2,502,515	-		LRK53_RS11210	0.76	-1.2
2,502,515	-		LRK53_RS11210	0.76	-0.8
2,502,515	-		LRK53_RS11210	0.76	-1.3
2,502,515	-		LRK53_RS11210	0.76	+0.8
2,502,515	-		LRK53_RS11210	0.76	+0.2
2,502,515	-		LRK53_RS11210	0.76	+1.8
2,502,515	-		LRK53_RS11210	0.76	-1.5
2,502,515	-		LRK53_RS11210	0.76	-1.5
2,502,515	-		LRK53_RS11210	0.76	-1.4
2,502,730	+		LRK53_RS11210	0.85	-0.8
2,502,730	+		LRK53_RS11210	0.85	-1.8
2,502,731	-		LRK53_RS11210	0.85	-0.3
2,502,731	-		LRK53_RS11210	0.85	+0.8
2,502,731	-		LRK53_RS11210	0.85	-0.7
2,502,742	+		LRK53_RS11210	0.86	-0.4
2,502,742	+		LRK53_RS11210	0.86	-1.2
2,502,742	+		LRK53_RS11210	0.86	-1.5
2,502,742	+		LRK53_RS11210	0.86	+0.8
2,502,742	+		LRK53_RS11210	0.86	-1.7
2,502,742	+		LRK53_RS11210	0.86	-0.6
2,502,742	+		LRK53_RS11210	0.86	-2.2
2,502,742	+		LRK53_RS11210	0.86	-0.6
2,502,742	+		LRK53_RS11210	0.86	-0.2
2,502,742	+		LRK53_RS11210	0.86	-1.2
2,502,742	+		LRK53_RS11210	0.86	+0.8
2,502,743	-		LRK53_RS11210	0.86	+1.8
2,502,743	-		LRK53_RS11210	0.86	-1.1
2,502,743	-		LRK53_RS11210	0.86	-0.2
2,502,743	-		LRK53_RS11210	0.86	-1.0
2,502,743	-		LRK53_RS11210	0.86	-1.5
2,502,743	-		LRK53_RS11210	0.86	-1.5
2,502,743	-		LRK53_RS11210	0.86	-0.5
2,502,743	-		LRK53_RS11210	0.86	-0.2
2,502,743	-		LRK53_RS11210	0.86	-1.0
2,502,743	-		LRK53_RS11210	0.86	-1.8
2,502,743	-		LRK53_RS11210	0.86	-0.8
2,502,743	-		LRK53_RS11210	0.86	-1.0
2,502,743	-		LRK53_RS11210	0.86	-2.8
2,502,743	-		LRK53_RS11210	0.86	-0.7
2,502,743	-		LRK53_RS11210	0.86	+0.3
2,502,743	-		LRK53_RS11210	0.86	-1.4
2,502,743	-		LRK53_RS11210	0.86	-0.8
2,502,746	+		LRK53_RS11210	0.86	+0.8
2,502,746	+		LRK53_RS11210	0.86	-2.2
2,502,746	+		LRK53_RS11210	0.86	-0.2
2,502,746	+		LRK53_RS11210	0.86	-3.4
2,502,747	-		LRK53_RS11210	0.86	+0.8
2,502,747	-		LRK53_RS11210	0.86	-0.8
2,502,799	+		LRK53_RS11210	0.88	-0.8
2,502,799	+		LRK53_RS11210	0.88	+0.8
2,502,799	+		LRK53_RS11210	0.88	-1.5
2,502,799	+		LRK53_RS11210	0.88	-0.8
2,502,799	+		LRK53_RS11210	0.88	-0.2
2,502,800	-		LRK53_RS11210	0.88	-0.8
2,502,800	-		LRK53_RS11210	0.88	-0.2
2,502,800	-		LRK53_RS11210	0.88	+0.2
2,502,800	-		LRK53_RS11210	0.88	-1.7
2,502,800	-		LRK53_RS11210	0.88	-0.2
2,502,800	-		LRK53_RS11210	0.88	-0.8
2,502,800	-		LRK53_RS11210	0.88	+1.4
2,502,877	+				+0.8
2,502,877	+				-2.1
2,502,878	-				+0.1
2,502,878	-				-1.2
2,502,878	-				-2.0
2,503,057	-				-0.5
2,503,286	+				-0.4
2,503,288	+				-1.0
2,503,288	+				+1.8
2,503,288	+				-0.8
2,503,288	+				-1.0
2,503,288	+				-1.5
2,503,288	+				-0.8
2,503,288	+				-1.5
2,503,288	+				-0.4
2,503,288	+				+0.8
2,503,288	+				-0.4
2,503,288	+				-1.8
2,503,288	+				-0.5
2,503,288	+				-2.2
2,503,288	+				-1.3
2,503,288	+				-0.8
2,503,288	+				-0.8
2,503,288	+				+0.5
2,503,288	+				+0.8
2,503,288	+				+0.1
2,503,288	+				-0.2
2,503,289	-				-2.0
2,503,289	-				-1.2
2,503,289	-				+0.8
2,503,289	-				+0.2
2,503,289	-				-0.2
2,503,289	-				-1.7
2,503,289	-				+1.8
2,503,289	-				-2.0
2,503,289	-				-2.1
2,503,289	-				-0.8
2,503,289	-				+0.4
2,503,982	+		LRK53_RS11215	0.60	-1.5
2,503,982	+		LRK53_RS11215	0.60	-0.5
2,503,982	+		LRK53_RS11215	0.60	-1.2
2,503,982	+		LRK53_RS11215	0.60	+0.8
2,503,983	-		LRK53_RS11215	0.60	-3.3
2,503,983	-		LRK53_RS11215	0.60	-0.2
2,503,983	-		LRK53_RS11215	0.60	+0.8
2,503,983	-		LRK53_RS11215	0.60	+0.8
2,503,983	-		LRK53_RS11215	0.60	-0.8
2,503,983	-		LRK53_RS11215	0.60	-1.0