Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10995

Experiment: defined media with 20AA_mix

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with 20AA_mix
2,455,102	+		LRK53_RS10990	0.20	+0.8
2,455,102	+		LRK53_RS10990	0.20	-1.5
2,455,102	+		LRK53_RS10990	0.20	-1.8
2,455,103	-		LRK53_RS10990	0.21	+0.8
2,455,103	-		LRK53_RS10990	0.21	-0.8
2,455,147	+		LRK53_RS10990	0.24	-0.8
2,455,147	+		LRK53_RS10990	0.24	-0.8
2,455,174	+		LRK53_RS10990	0.27	-0.2
2,455,174	+		LRK53_RS10990	0.27	-0.5
2,455,174	+		LRK53_RS10990	0.27	-2.5
2,455,399	+		LRK53_RS10990	0.45	+0.4
2,455,400	-		LRK53_RS10990	0.46	-0.8
2,455,400	-		LRK53_RS10990	0.46	+0.8
2,455,630	+		LRK53_RS10990	0.65	-0.1
2,455,630	+		LRK53_RS10990	0.65	-0.2
2,455,630	+		LRK53_RS10990	0.65	-2.2
2,455,631	-		LRK53_RS10990	0.65	+0.8
2,455,631	-		LRK53_RS10990	0.65	-0.2
2,455,633	-		LRK53_RS10990	0.65	-0.2
2,455,669	+		LRK53_RS10990	0.68	-0.2
2,455,669	+		LRK53_RS10990	0.68	-0.5
2,455,669	+		LRK53_RS10990	0.68	-1.0
2,455,669	+		LRK53_RS10990	0.68	-0.8
2,455,669	+		LRK53_RS10990	0.68	-1.8
2,455,669	+		LRK53_RS10990	0.68	-2.7
2,455,669	+		LRK53_RS10990	0.68	-0.2
2,455,669	+		LRK53_RS10990	0.68	+0.4
2,455,670	-		LRK53_RS10990	0.68	+0.2
2,455,670	-		LRK53_RS10990	0.68	-0.2
2,455,670	-		LRK53_RS10990	0.68	+0.5
2,455,670	-		LRK53_RS10990	0.68	+0.8
2,455,670	-		LRK53_RS10990	0.68	-0.9
2,455,670	-		LRK53_RS10990	0.68	-2.4
2,455,670	-		LRK53_RS10990	0.68	+0.8
2,455,670	-		LRK53_RS10990	0.68	-2.0
2,455,670	-		LRK53_RS10990	0.68	+1.8
2,455,670	-		LRK53_RS10990	0.68	-0.2
2,455,693	+		LRK53_RS10990	0.70	+0.8
2,455,693	+		LRK53_RS10990	0.70	+0.3
2,455,693	+		LRK53_RS10990	0.70	+0.8
2,455,693	+		LRK53_RS10990	0.70	+0.8
2,455,694	-		LRK53_RS10990	0.70	-1.8
2,455,694	-		LRK53_RS10990	0.70	+0.7
2,455,694	-		LRK53_RS10990	0.70	-0.2
2,455,694	-		LRK53_RS10990	0.70	-1.1
2,455,694	-		LRK53_RS10990	0.70	-0.8
2,455,694	-		LRK53_RS10990	0.70	-0.2
2,455,694	-		LRK53_RS10990	0.70	-1.2
2,455,696	+		LRK53_RS10990	0.70	-1.0
2,455,696	+		LRK53_RS10990	0.70	-2.2
2,455,696	+		LRK53_RS10990	0.70	-0.8
2,455,697	-		LRK53_RS10990	0.71	-0.8
2,455,711	+		LRK53_RS10990	0.72	+0.8
2,455,815	+		LRK53_RS10990	0.80	+0.2
2,455,815	+		LRK53_RS10990	0.80	+1.8
2,455,815	+		LRK53_RS10990	0.80	-0.2
2,455,815	+		LRK53_RS10990	0.80	-1.2
2,455,815	+		LRK53_RS10990	0.80	-0.4
2,455,815	+		LRK53_RS10990	0.80	-0.2
2,455,815	+		LRK53_RS10990	0.80	-1.5
2,455,815	+		LRK53_RS10990	0.80	+0.2
2,455,816	-		LRK53_RS10990	0.81	-1.3
2,455,816	-		LRK53_RS10990	0.81	-0.8
2,455,852	+		LRK53_RS10990	0.84	-1.0
2,455,853	-		LRK53_RS10990	0.84	+0.8
2,455,853	-		LRK53_RS10990	0.84	-0.9
2,455,853	-		LRK53_RS10990	0.84	-1.7
2,455,884	+		LRK53_RS10990	0.86	+0.4
2,455,885	-		LRK53_RS10990	0.86	+0.2
2,455,885	-		LRK53_RS10990	0.86	+1.4
2,455,945	+				+0.8
2,455,946	-				+0.8
2,456,069	+				-0.8
2,456,070	-				-0.2
2,456,085	+				-0.2
2,456,085	+				-0.8
2,456,086	-				-1.4
2,456,086	-				+0.8
2,456,118	+				-1.4
2,456,118	+				-0.4
2,456,118	+				-0.8
2,456,118	+				-1.8
2,456,118	+				-0.2
2,456,119	-				+0.4
2,456,119	-				+1.8
2,456,206	+		LRK53_RS10995	0.19	-0.4
2,456,346	+		LRK53_RS10995	0.39	-1.2
2,456,346	+		LRK53_RS10995	0.39	+0.2
2,456,346	+		LRK53_RS10995	0.39	-0.8
2,456,346	+		LRK53_RS10995	0.39	-0.2
2,456,347	-		LRK53_RS10995	0.39	+0.8
2,456,347	-		LRK53_RS10995	0.39	-0.0
2,456,427	+		LRK53_RS10995	0.51	-0.2
2,456,427	+		LRK53_RS10995	0.51	-1.0
2,456,428	-		LRK53_RS10995	0.51	-1.0
2,456,490	+		LRK53_RS10995	0.60	-1.2
2,456,490	+		LRK53_RS10995	0.60	-0.8
2,456,490	+		LRK53_RS10995	0.60	-2.9
2,456,491	-		LRK53_RS10995	0.60	-1.2
2,456,491	-		LRK53_RS10995	0.60	-2.3
2,456,491	-		LRK53_RS10995	0.60	-0.5
2,456,493	-		LRK53_RS10995	0.61	-0.2
2,456,493	-		LRK53_RS10995	0.61	-1.2
2,456,501	+		LRK53_RS10995	0.62	-1.9
2,456,501	+		LRK53_RS10995	0.62	+1.4
2,456,501	+		LRK53_RS10995	0.62	-0.2
2,456,501	+		LRK53_RS10995	0.62	+1.8
2,456,501	+		LRK53_RS10995	0.62	+0.8
2,456,502	-		LRK53_RS10995	0.62	-0.9
2,456,502	-		LRK53_RS10995	0.62	-2.0
2,456,502	-		LRK53_RS10995	0.62	-1.5
2,456,502	-		LRK53_RS10995	0.62	-0.4
2,456,889	+				-0.4
2,456,890	-				-1.5
2,456,956	+				-0.7
2,456,956	+				-1.0
2,456,957	-				-1.2
2,456,957	-				-0.8
2,456,957	-				-2.2
2,457,001	+		LRK53_RS11000	0.10	-1.5
2,457,002	-		LRK53_RS11000	0.10	-1.0
2,457,002	-		LRK53_RS11000	0.10	-0.9
2,457,002	-		LRK53_RS11000	0.10	-0.8
2,457,002	-		LRK53_RS11000	0.10	-0.6
2,457,002	-		LRK53_RS11000	0.10	-1.8
2,457,025	+		LRK53_RS11000	0.11	-0.2
2,457,025	+		LRK53_RS11000	0.11	-0.2
2,457,025	+		LRK53_RS11000	0.11	+0.2
2,457,025	+		LRK53_RS11000	0.11	+0.2
2,457,025	+		LRK53_RS11000	0.11	-0.2
2,457,025	+		LRK53_RS11000	0.11	-0.5
2,457,025	+		LRK53_RS11000	0.11	-1.5
2,457,026	-		LRK53_RS11000	0.11	-1.2
2,457,026	-		LRK53_RS11000	0.11	-0.2
2,457,026	-		LRK53_RS11000	0.11	-0.2
2,457,026	-		LRK53_RS11000	0.11	-0.5
2,457,026	-		LRK53_RS11000	0.11	-1.2
2,457,026	-		LRK53_RS11000	0.11	+2.4
2,457,026	-		LRK53_RS11000	0.11	-1.5
2,457,052	+		LRK53_RS11000	0.13	-0.1
2,457,053	-		LRK53_RS11000	0.13	-2.4
2,457,082	+		LRK53_RS11000	0.14	+0.0
2,457,082	+		LRK53_RS11000	0.14	+1.1
2,457,082	+		LRK53_RS11000	0.14	+0.0
2,457,083	-		LRK53_RS11000	0.14	-0.2
2,457,083	-		LRK53_RS11000	0.14	+0.8
2,457,187	+		LRK53_RS11000	0.20	-0.9
2,457,187	+		LRK53_RS11000	0.20	-2.4
2,457,187	+		LRK53_RS11000	0.20	-0.2
2,457,188	-		LRK53_RS11000	0.20	-0.2
2,457,188	-		LRK53_RS11000	0.20	-1.5
2,457,188	-		LRK53_RS11000	0.20	-2.0
2,457,196	+		LRK53_RS11000	0.20	-0.8
2,457,196	+		LRK53_RS11000	0.20	+1.8
2,457,232	+		LRK53_RS11000	0.22	+0.8
2,457,390	+		LRK53_RS11000	0.30	-0.2
2,457,390	+		LRK53_RS11000	0.30	-0.2
2,457,391	-		LRK53_RS11000	0.30	+0.2
2,457,391	-		LRK53_RS11000	0.30	-1.5
2,457,391	-		LRK53_RS11000	0.30	+1.4
2,457,391	-		LRK53_RS11000	0.30	-1.2
2,457,391	-		LRK53_RS11000	0.30	+0.8
2,457,430	+		LRK53_RS11000	0.32	-0.2
2,457,430	+		LRK53_RS11000	0.32	-2.0
2,457,431	-		LRK53_RS11000	0.32	+0.2
2,457,439	-		LRK53_RS11000	0.32	-0.4
2,457,460	+		LRK53_RS11000	0.34	+2.4
2,457,460	+		LRK53_RS11000	0.34	-1.2
2,457,460	+		LRK53_RS11000	0.34	-0.2
2,457,460	+		LRK53_RS11000	0.34	-0.4
2,457,460	+		LRK53_RS11000	0.34	-1.5
2,457,461	-		LRK53_RS11000	0.34	-1.8
2,457,461	-		LRK53_RS11000	0.34	-1.2
2,457,461	-		LRK53_RS11000	0.34	-0.2
2,457,511	+		LRK53_RS11000	0.36	+0.8
2,457,511	+		LRK53_RS11000	0.36	-1.5
2,457,512	-		LRK53_RS11000	0.36	+1.2
2,457,580	+		LRK53_RS11000	0.40	+0.4
2,457,580	+		LRK53_RS11000	0.40	+1.4
2,457,580	+		LRK53_RS11000	0.40	-1.4
2,457,580	+		LRK53_RS11000	0.40	-1.2
2,457,580	+		LRK53_RS11000	0.40	+0.2
2,457,580	+		LRK53_RS11000	0.40	-0.8
2,457,580	+		LRK53_RS11000	0.40	-1.3
2,457,580	+		LRK53_RS11000	0.40	-1.2
2,457,580	+		LRK53_RS11000	0.40	-2.2
2,457,580	+		LRK53_RS11000	0.40	-1.2
2,457,580	+		LRK53_RS11000	0.40	-0.5
2,457,581	-		LRK53_RS11000	0.40	+0.2
2,457,581	-		LRK53_RS11000	0.40	-0.6
2,457,581	-		LRK53_RS11000	0.40	-3.0
2,457,581	-		LRK53_RS11000	0.40	-0.8
2,457,581	-		LRK53_RS11000	0.40	-1.2
2,457,581	-		LRK53_RS11000	0.40	-0.2
2,457,581	-		LRK53_RS11000	0.40	+1.8
2,457,581	-		LRK53_RS11000	0.40	+0.8
2,457,581	-		LRK53_RS11000	0.40	-1.0
2,457,581	-		LRK53_RS11000	0.40	-1.2