Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS07930

Experiment: defined media with 20AA_mix

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with 20AA_mix
1,772,767	+		LRK53_RS07925	0.11	-1.0
1,772,768	-		LRK53_RS07925	0.12	+0.8
1,772,926	+		LRK53_RS07925	0.28	-0.2
1,772,926	+		LRK53_RS07925	0.28	+0.2
1,773,208	+		LRK53_RS07925	0.59	-0.2
1,773,208	+		LRK53_RS07925	0.59	-2.0
1,773,208	+		LRK53_RS07925	0.59	-0.8
1,773,208	+		LRK53_RS07925	0.59	-1.2
1,773,209	-		LRK53_RS07925	0.59	+0.2
1,773,209	-		LRK53_RS07925	0.59	-1.2
1,773,209	-		LRK53_RS07925	0.59	+0.8
1,773,383	-		LRK53_RS07925	0.78	-1.9
1,773,383	-		LRK53_RS07925	0.78	-1.0
1,773,383	-		LRK53_RS07925	0.78	-2.6
1,773,383	-		LRK53_RS07925	0.78	+0.2
1,773,385	+		LRK53_RS07925	0.78	-0.2
1,773,385	+		LRK53_RS07925	0.78	+0.8
1,773,385	+		LRK53_RS07925	0.78	+0.2
1,773,385	+		LRK53_RS07925	0.78	-1.2
1,773,386	-		LRK53_RS07925	0.78	-2.7
1,773,386	-		LRK53_RS07925	0.78	-1.6
1,773,495	+		LRK53_RS07925	0.90	-2.3
1,773,604	-				-1.4
1,773,621	+				-1.8
1,773,621	+				-0.2
1,773,621	+				-2.0
1,773,621	+				+0.8
1,773,622	-				-0.6
1,773,622	-				-1.6
1,773,622	-				-1.2
1,773,622	-				-0.2
1,773,622	-				-0.4
1,773,622	-				-0.8
1,773,623	+				-0.8
1,773,624	-				-2.2
1,773,624	-				-1.8
1,773,629	-				+1.8
1,773,646	-				-0.8
1,773,646	-				-1.7
1,773,738	+				-1.4
1,773,898	+		LRK53_RS07930	0.15	-1.7
1,773,928	+		LRK53_RS07930	0.18	+0.8
1,773,928	+		LRK53_RS07930	0.18	-0.2
1,773,928	+		LRK53_RS07930	0.18	-1.2
1,773,928	+		LRK53_RS07930	0.18	+0.2
1,773,928	+		LRK53_RS07930	0.18	-0.6
1,773,928	+		LRK53_RS07930	0.18	-0.2
1,773,928	+		LRK53_RS07930	0.18	-1.5
1,773,929	-		LRK53_RS07930	0.18	-0.2
1,773,929	-		LRK53_RS07930	0.18	+0.8
1,773,929	-		LRK53_RS07930	0.18	-0.2
1,773,929	-		LRK53_RS07930	0.18	-1.5
1,773,929	-		LRK53_RS07930	0.18	-1.2
1,774,051	+		LRK53_RS07930	0.28	+0.2
1,774,051	+		LRK53_RS07930	0.28	-1.2
1,774,051	+		LRK53_RS07930	0.28	-0.7
1,774,051	+		LRK53_RS07930	0.28	+0.2
1,774,051	+		LRK53_RS07930	0.28	-1.8
1,774,051	+		LRK53_RS07930	0.28	-0.2
1,774,051	+		LRK53_RS07930	0.28	-1.8
1,774,051	+		LRK53_RS07930	0.28	-0.8
1,774,051	+		LRK53_RS07930	0.28	-1.9
1,774,051	+		LRK53_RS07930	0.28	-0.7
1,774,051	+		LRK53_RS07930	0.28	+0.2
1,774,051	+		LRK53_RS07930	0.28	-0.8
1,774,051	+		LRK53_RS07930	0.28	-0.2
1,774,051	+		LRK53_RS07930	0.28	-0.7
1,774,051	+		LRK53_RS07930	0.28	-1.1
1,774,051	+		LRK53_RS07930	0.28	-0.5
1,774,051	+		LRK53_RS07930	0.28	-0.8
1,774,051	+		LRK53_RS07930	0.28	-2.3
1,774,051	+		LRK53_RS07930	0.28	-0.2
1,774,052	-		LRK53_RS07930	0.28	-0.7
1,774,052	-		LRK53_RS07930	0.28	-0.2
1,774,052	-		LRK53_RS07930	0.28	-1.8
1,774,052	-		LRK53_RS07930	0.28	-0.8
1,774,052	-		LRK53_RS07930	0.28	-0.7
1,774,052	-		LRK53_RS07930	0.28	-0.5
1,774,052	-		LRK53_RS07930	0.28	-0.6
1,774,052	-		LRK53_RS07930	0.28	-0.2
1,774,052	-		LRK53_RS07930	0.28	-1.1
1,774,052	-		LRK53_RS07930	0.28	-0.6
1,774,052	-		LRK53_RS07930	0.28	-0.8
1,774,052	-		LRK53_RS07930	0.28	+0.8
1,774,052	-		LRK53_RS07930	0.28	+0.8
1,774,052	-		LRK53_RS07930	0.28	+1.8
1,774,052	-		LRK53_RS07930	0.28	-0.2
1,774,052	-		LRK53_RS07930	0.28	-1.5
1,774,052	-		LRK53_RS07930	0.28	-1.2
1,774,052	-		LRK53_RS07930	0.28	-2.2
1,774,052	-		LRK53_RS07930	0.28	-0.8
1,774,052	-		LRK53_RS07930	0.28	-2.8
1,774,052	-		LRK53_RS07930	0.28	-0.2
1,774,090	+		LRK53_RS07930	0.32	+0.8
1,774,091	-		LRK53_RS07930	0.32	+0.8
1,774,219	+		LRK53_RS07930	0.43	-1.1
1,774,219	+		LRK53_RS07930	0.43	-1.2
1,774,219	+		LRK53_RS07930	0.43	-0.2
1,774,219	+		LRK53_RS07930	0.43	-0.2
1,774,219	+		LRK53_RS07930	0.43	-0.2
1,774,219	+		LRK53_RS07930	0.43	-1.1
1,774,219	+		LRK53_RS07930	0.43	-0.6
1,774,219	+		LRK53_RS07930	0.43	+0.3
1,774,220	-		LRK53_RS07930	0.43	-1.2
1,774,220	-		LRK53_RS07930	0.43	-1.2
1,774,220	-		LRK53_RS07930	0.43	-0.8
1,774,220	-		LRK53_RS07930	0.43	+0.4
1,774,220	-		LRK53_RS07930	0.43	-2.2
1,774,220	-		LRK53_RS07930	0.43	-1.2
1,774,220	-		LRK53_RS07930	0.43	-0.7
1,774,268	+		LRK53_RS07930	0.47	-0.2
1,774,269	-		LRK53_RS07930	0.47	-0.6
1,774,375	+		LRK53_RS07930	0.56	+0.0
1,774,375	+		LRK53_RS07930	0.56	-1.4
1,774,375	+		LRK53_RS07930	0.56	-2.1
1,774,375	+		LRK53_RS07930	0.56	-0.8
1,774,376	-		LRK53_RS07930	0.56	+0.8
1,774,376	-		LRK53_RS07930	0.56	+0.8
1,774,376	-		LRK53_RS07930	0.56	+0.8
1,774,376	-		LRK53_RS07930	0.56	-0.8
1,774,376	-		LRK53_RS07930	0.56	+0.8
1,774,498	+		LRK53_RS07930	0.67	-0.2
1,774,499	-		LRK53_RS07930	0.67	+0.8
1,774,765	+		LRK53_RS07930	0.90	-0.2
1,774,765	+		LRK53_RS07930	0.90	+0.0
1,774,765	+		LRK53_RS07930	0.90	-1.1
1,774,765	+		LRK53_RS07930	0.90	-0.6
1,774,766	-		LRK53_RS07930	0.90	-0.7
1,774,766	-		LRK53_RS07930	0.90	-1.1
1,774,792	+				-1.8
1,774,792	+				-0.2
1,774,793	-				+0.8
1,774,793	-				-0.6
1,774,822	+				-0.8
1,774,822	+				-0.6
1,774,822	+				-0.8
1,774,822	+				+0.8
1,774,822	+				+0.8
1,774,822	+				-1.2
1,774,822	+				-1.1
1,774,822	+				-1.1
1,774,822	+				-1.2
1,774,822	+				+0.8
1,774,823	-				-1.2
1,774,823	-				-0.8
1,774,823	-				+1.5
1,774,823	-				-0.6
1,774,823	-				-2.1
1,774,823	-				-0.2
1,774,823	-				+2.8
1,774,823	-				-1.2
1,774,823	-				-0.8
1,774,894	+				+0.2
1,774,894	+				-0.8
1,774,895	-				-2.0
1,774,895	-				-0.8
1,775,025	+				-0.9
1,775,025	+				-0.8
1,775,025	+				-0.1
1,775,026	-				-0.7
1,775,026	-				-1.2
1,775,026	-				-0.8
1,775,032	+				-0.1
1,775,032	+				-1.6
1,775,032	+				-2.8
1,775,154	+				-1.0
1,775,154	+				-1.8
1,775,154	+				-0.2
1,775,154	+				-0.6
1,775,154	+				+1.8
1,775,154	+				-0.7
1,775,154	+				-0.2
1,775,155	-				+0.2
1,775,155	-				-1.2
1,775,155	-				-1.6
1,775,155	-				-1.2
1,775,155	-				-0.6
1,775,155	-				-0.2
1,775,155	-				-2.7
1,775,155	-				+0.2
1,775,155	-				-1.0
1,775,174	+				-1.6
1,775,174	+				+0.2
1,775,175	-				-0.2
1,775,451	+		LRK53_RS07935	0.12	-1.2
1,775,451	+		LRK53_RS07935	0.12	+0.0
1,775,451	+		LRK53_RS07935	0.12	+0.8
1,775,451	+		LRK53_RS07935	0.12	-0.2
1,775,451	+		LRK53_RS07935	0.12	-1.2
1,775,451	+		LRK53_RS07935	0.12	+1.2
1,775,451	+		LRK53_RS07935	0.12	-0.8
1,775,451	+		LRK53_RS07935	0.12	-1.8
1,775,451	+		LRK53_RS07935	0.12	-0.5
1,775,451	+		LRK53_RS07935	0.12	+2.3
1,775,451	+		LRK53_RS07935	0.12	-0.2
1,775,451	+		LRK53_RS07935	0.12	-1.2
1,775,451	+		LRK53_RS07935	0.12	-0.2
1,775,451	+		LRK53_RS07935	0.12	-1.8
1,775,451	+		LRK53_RS07935	0.12	+0.1
1,775,451	+		LRK53_RS07935	0.12	-2.2
1,775,451	+		LRK53_RS07935	0.12	-0.2
1,775,451	+		LRK53_RS07935	0.12	-1.6
1,775,452	-		LRK53_RS07935	0.12	-0.2
1,775,452	-		LRK53_RS07935	0.12	+0.8
1,775,452	-		LRK53_RS07935	0.12	+0.2
1,775,452	-		LRK53_RS07935	0.12	-1.8
1,775,452	-		LRK53_RS07935	0.12	-2.1
1,775,452	-		LRK53_RS07935	0.12	+0.8
1,775,452	-		LRK53_RS07935	0.12	+0.2
1,775,452	-		LRK53_RS07935	0.12	-1.2
1,775,452	-		LRK53_RS07935	0.12	+0.3
1,775,452	-		LRK53_RS07935	0.12	-2.2
1,775,452	-		LRK53_RS07935	0.12	+0.2
1,775,452	-		LRK53_RS07935	0.12	-2.8
1,775,452	-		LRK53_RS07935	0.12	-0.0
1,775,452	-		LRK53_RS07935	0.12	+0.0
1,775,452	-		LRK53_RS07935	0.12	+1.8
1,775,553	+		LRK53_RS07935	0.15	-0.8
1,775,554	-		LRK53_RS07935	0.15	+0.3
1,775,554	-		LRK53_RS07935	0.15	+0.4
1,775,554	-		LRK53_RS07935	0.15	-0.5
1,775,554	-		LRK53_RS07935	0.15	+0.8
1,775,554	-		LRK53_RS07935	0.15	-0.2
1,775,554	-		LRK53_RS07935	0.15	-1.2
1,775,638	-		LRK53_RS07935	0.18	-1.2
1,775,638	-		LRK53_RS07935	0.18	+0.8
1,775,658	+		LRK53_RS07935	0.19	-1.1