Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS07705

Experiment: defined media with 20AA_mix

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with 20AA_mix
1,718,819	+		LRK53_RS07695	0.44	-2.2
1,718,819	+		LRK53_RS07695	0.44	-0.7
1,718,819	+		LRK53_RS07695	0.44	+0.2
1,718,819	+		LRK53_RS07695	0.44	+1.8
1,718,820	-		LRK53_RS07695	0.44	-0.8
1,718,820	-		LRK53_RS07695	0.44	+0.8
1,718,820	-		LRK53_RS07695	0.44	-1.0
1,718,933	+		LRK53_RS07695	0.59	-1.4
1,719,238	+				-0.7
1,719,238	+				-1.9
1,719,239	-				-0.3
1,719,239	-				-0.8
1,719,239	-				+0.5
1,719,239	-				-1.2
1,719,292	+				+0.8
1,719,292	+				+0.8
1,719,292	+				-0.1
1,719,293	-				-0.5
1,719,293	-				-0.0
1,719,293	-				-0.4
1,719,344	+				+0.8
1,719,362	+				-0.2
1,719,723	+				-0.2
1,719,723	+				+1.0
1,719,723	+				-1.3
1,719,723	+				+0.3
1,719,724	-				-0.7
1,719,724	-				+2.4
1,719,724	-				-0.2
1,719,724	-				-2.0
1,719,811	-		LRK53_RS07705	0.10	+0.2
1,719,811	-		LRK53_RS07705	0.10	-0.2
1,719,811	-		LRK53_RS07705	0.10	+0.5
1,719,870	+		LRK53_RS07705	0.14	+0.4
1,719,870	+		LRK53_RS07705	0.14	+1.8
1,719,871	-		LRK53_RS07705	0.14	+1.0
1,719,871	-		LRK53_RS07705	0.14	-0.3
1,719,871	-		LRK53_RS07705	0.14	+0.1
1,720,335	+		LRK53_RS07705	0.39	+0.4
1,720,335	+		LRK53_RS07705	0.39	+0.8
1,720,335	+		LRK53_RS07705	0.39	-0.1
1,720,336	-		LRK53_RS07705	0.39	+0.0
1,720,336	-		LRK53_RS07705	0.39	-1.2
1,720,336	-		LRK53_RS07705	0.39	+1.8
1,720,536	+		LRK53_RS07705	0.50	+1.0
1,720,536	+		LRK53_RS07705	0.50	-0.5
1,720,688	+		LRK53_RS07705	0.58	+0.4
1,720,689	-		LRK53_RS07705	0.58	-0.6
1,720,689	-		LRK53_RS07705	0.58	-1.2
1,720,737	+		LRK53_RS07705	0.61	+0.8
1,720,737	+		LRK53_RS07705	0.61	+0.3
1,720,737	+		LRK53_RS07705	0.61	+0.2
1,720,737	+		LRK53_RS07705	0.61	+0.8
1,720,737	+		LRK53_RS07705	0.61	-0.2
1,720,737	+		LRK53_RS07705	0.61	+0.4
1,720,737	+		LRK53_RS07705	0.61	-1.2
1,720,737	+		LRK53_RS07705	0.61	-0.8
1,720,737	+		LRK53_RS07705	0.61	+0.9
1,720,737	+		LRK53_RS07705	0.61	-1.5
1,720,737	+		LRK53_RS07705	0.61	-0.7
1,720,738	-		LRK53_RS07705	0.61	-0.7
1,720,738	-		LRK53_RS07705	0.61	-0.2
1,720,738	-		LRK53_RS07705	0.61	-1.2
1,720,738	-		LRK53_RS07705	0.61	-1.2
1,720,738	-		LRK53_RS07705	0.61	-0.1
1,720,738	-		LRK53_RS07705	0.61	+1.2
1,720,738	-		LRK53_RS07705	0.61	-0.2
1,720,738	-		LRK53_RS07705	0.61	-2.0
1,720,738	-		LRK53_RS07705	0.61	+0.2
1,720,738	-		LRK53_RS07705	0.61	+2.0
1,720,738	-		LRK53_RS07705	0.61	-0.8
1,720,738	-		LRK53_RS07705	0.61	+0.8
1,720,738	-		LRK53_RS07705	0.61	+2.6
1,720,738	-		LRK53_RS07705	0.61	+2.1
1,720,821	+		LRK53_RS07705	0.65	+0.2
1,720,821	+		LRK53_RS07705	0.65	+0.2
1,720,821	+		LRK53_RS07705	0.65	+0.5
1,720,821	+		LRK53_RS07705	0.65	+0.2
1,720,821	+		LRK53_RS07705	0.65	+0.8
1,720,821	+		LRK53_RS07705	0.65	+0.2
1,720,822	-		LRK53_RS07705	0.65	+0.3
1,720,822	-		LRK53_RS07705	0.65	+0.1
1,720,822	-		LRK53_RS07705	0.65	+0.0
1,720,920	+		LRK53_RS07705	0.71	+0.4
1,720,959	+		LRK53_RS07705	0.73	+0.2
1,720,959	+		LRK53_RS07705	0.73	+0.1
1,720,959	+		LRK53_RS07705	0.73	+0.5
1,720,960	-		LRK53_RS07705	0.73	-0.2
1,720,960	-		LRK53_RS07705	0.73	+0.8
1,720,960	-		LRK53_RS07705	0.73	+0.8
1,721,082	+		LRK53_RS07705	0.80	-1.5
1,721,082	+		LRK53_RS07705	0.80	+0.3
1,721,082	+		LRK53_RS07705	0.80	-0.5
1,721,082	+		LRK53_RS07705	0.80	+0.3
1,721,083	-		LRK53_RS07705	0.80	+0.3
1,721,083	-		LRK53_RS07705	0.80	+0.8
1,721,097	+		LRK53_RS07705	0.80	+1.8
1,721,097	+		LRK53_RS07705	0.80	-0.7
1,721,097	+		LRK53_RS07705	0.80	-1.4
1,721,097	+		LRK53_RS07705	0.80	-1.5
1,721,097	+		LRK53_RS07705	0.80	+0.2
1,721,097	+		LRK53_RS07705	0.80	+0.4
1,721,097	+		LRK53_RS07705	0.80	-0.3
1,721,097	+		LRK53_RS07705	0.80	-0.1
1,721,097	+		LRK53_RS07705	0.80	-0.2
1,721,097	+		LRK53_RS07705	0.80	+0.8
1,721,098	-		LRK53_RS07705	0.80	-0.5
1,721,098	-		LRK53_RS07705	0.80	+1.0
1,721,098	-		LRK53_RS07705	0.80	-0.0
1,721,098	-		LRK53_RS07705	0.80	+0.8
1,721,118	+		LRK53_RS07705	0.82	-0.1
1,721,118	+		LRK53_RS07705	0.82	+2.0
1,721,118	+		LRK53_RS07705	0.82	+0.5
1,721,118	+		LRK53_RS07705	0.82	+0.0
1,721,118	+		LRK53_RS07705	0.82	+0.5
1,721,118	+		LRK53_RS07705	0.82	+1.4
1,721,118	+		LRK53_RS07705	0.82	+0.8
1,721,118	+		LRK53_RS07705	0.82	-0.2
1,721,118	+		LRK53_RS07705	0.82	+0.3
1,721,118	+		LRK53_RS07705	0.82	+0.6
1,721,118	+		LRK53_RS07705	0.82	-0.3
1,721,118	+		LRK53_RS07705	0.82	-0.7
1,721,119	-		LRK53_RS07705	0.82	-0.8
1,721,119	-		LRK53_RS07705	0.82	-0.2
1,721,119	-		LRK53_RS07705	0.82	-0.2
1,721,119	-		LRK53_RS07705	0.82	+1.3
1,721,119	-		LRK53_RS07705	0.82	+1.1
1,721,119	-		LRK53_RS07705	0.82	+0.8
1,721,119	-		LRK53_RS07705	0.82	+0.8
1,721,119	-		LRK53_RS07705	0.82	+3.4
1,721,119	-		LRK53_RS07705	0.82	-0.2
1,721,119	-		LRK53_RS07705	0.82	+0.2
1,721,119	-		LRK53_RS07705	0.82	+0.8
1,721,119	-		LRK53_RS07705	0.82	-0.5
1,721,119	-		LRK53_RS07705	0.82	+0.4
1,721,119	-		LRK53_RS07705	0.82	-0.9
1,721,119	-		LRK53_RS07705	0.82	+0.4
1,721,119	-		LRK53_RS07705	0.82	+0.1
1,721,217	+		LRK53_RS07705	0.87	+0.3
1,721,217	+		LRK53_RS07705	0.87	+0.8
1,721,217	+		LRK53_RS07705	0.87	+0.2
1,721,218	-		LRK53_RS07705	0.87	+1.2
1,721,218	-		LRK53_RS07705	0.87	+0.2
1,721,310	+				+0.8
1,721,311	-				+0.4
1,721,311	-				+1.5
1,721,311	-				-0.2
1,721,311	-				-0.6
1,721,311	-				+1.4
1,721,311	-				+1.8
1,721,391	+				-0.2
1,721,391	+				+1.4
1,721,391	+				-0.4
1,721,391	+				+0.7
1,721,391	+				-0.4
1,721,391	+				-0.8
1,721,391	+				-0.4
1,721,391	+				+0.3
1,721,391	+				+1.0
1,721,391	+				+1.8
1,721,391	+				-0.8
1,721,391	+				-0.2
1,721,391	+				+0.2
1,721,391	+				+1.4
1,721,392	-				+0.4
1,721,392	-				+1.8
1,721,392	-				-0.2
1,721,392	-				-0.2
1,721,392	-				+0.6
1,721,392	-				+0.2
1,721,392	-				-0.3
1,721,392	-				+0.5
1,721,392	-				+3.1
1,721,392	-				+0.2
1,721,392	-				+0.5
1,721,409	+				+0.0
1,721,409	+				+0.8
1,721,409	+				-0.2
1,721,409	+				+1.3
1,721,410	-				+0.4
1,721,410	-				+2.4
1,721,410	-				+1.8
1,721,410	-				+0.7
1,721,410	-				+1.0
1,721,410	-				+1.5
1,721,410	-				+2.8
1,721,410	-				-0.5
1,721,410	-				-1.4
1,721,410	-				+1.0
1,721,410	-				+1.8
1,721,410	-				+1.5
1,721,410	-				+0.8
1,721,410	-				+0.1
1,721,410	-				-0.2
1,721,410	-				+1.8
1,721,410	-				+0.2
1,721,430	+				-2.2
1,721,430	+				+0.8
1,721,430	+				-0.2
1,721,430	+				-0.2
1,721,431	-				+0.2
1,721,477	+				-0.0
1,721,477	+				-0.5
1,721,477	+				+0.5
1,721,477	+				+0.5
1,721,477	+				+0.5
1,721,477	+				+0.2
1,721,477	+				-0.3
1,721,477	+				-0.2
1,721,477	+				-0.1
1,721,477	+				-1.2
1,721,477	+				-2.0
1,721,477	+				-1.1
1,721,477	+				-0.8
1,721,477	+				+0.8
1,721,477	+				+0.4
1,721,477	+				+0.8
1,721,477	+				+0.5
1,721,477	+				+0.2
1,721,477	+				-0.8
1,721,478	-				-0.2
1,721,478	-				+0.0
1,721,478	-				+0.5
1,721,478	-				+0.8
1,721,478	-				+0.6
1,721,478	-				+0.2
1,721,478	-				+2.4
1,721,478	-				-0.8
1,721,478	-				+1.8
1,721,478	-				+0.8
1,721,478	-				+1.4
1,721,478	-				-0.6
1,721,771	+				+0.8
1,721,804	+				-0.8
1,721,804	+				-0.2
1,721,804	+				-1.8
1,721,839	+				-1.4
1,721,839	+				-1.5
1,721,839	+				+0.8
1,721,839	+				-0.2
1,721,839	+				+0.8
1,721,839	+				-0.8
1,721,839	+				-2.5
1,721,840	-				-1.0
1,721,840	-				-0.2
1,721,840	-				-0.3
1,721,840	-				-0.2
1,721,840	-				-1.2
1,721,843	+				-1.2
1,721,843	+				+0.8
1,721,843	+				-0.2
1,721,843	+				-0.2
1,721,843	+				-2.0
1,721,844	-				+0.8
1,721,844	-				-0.6
1,721,844	-				-0.2
1,721,844	-				-0.8
1,721,844	-				+0.8
1,721,844	-				-0.2
1,721,844	-				+0.2
1,721,844	-				-1.2
1,721,844	-				-0.4
1,721,868	+				-0.2
1,721,868	+				-1.4
1,721,868	+				+0.8
1,721,868	+				-0.5
1,721,869	-				-1.4
1,721,939	+				-0.2
1,721,939	+				-2.0
1,721,939	+				-2.7
1,721,940	-				+1.8
1,722,081	+				-1.8
1,722,081	+				-1.8
1,722,214	+				-1.4
1,722,214	+				-1.1
1,722,215	-				-1.5
1,722,215	-				-0.2
1,722,215	-				-1.8
1,722,215	-				-0.6