Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05965

Experiment: defined media with 20AA_mix

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with 20AA_mix
1,375,516	+				-1.1
1,375,516	+				+0.9
1,375,516	+				-0.5
1,375,517	-				+0.3
1,375,517	-				+0.9
1,375,517	-				-0.1
1,375,605	+		LRK53_RS05955	0.25	-0.7
1,375,605	+		LRK53_RS05955	0.25	-1.0
1,375,630	+		LRK53_RS05955	0.32	-0.6
1,375,630	+		LRK53_RS05955	0.32	-1.1
1,375,631	-		LRK53_RS05955	0.33	+0.1
1,375,631	-		LRK53_RS05955	0.33	-0.1
1,375,631	-		LRK53_RS05955	0.33	-0.1
1,375,631	-		LRK53_RS05955	0.33	+0.9
1,375,631	-		LRK53_RS05955	0.33	-0.7
1,375,631	-		LRK53_RS05955	0.33	-0.4
1,375,697	+		LRK53_RS05955	0.53	-0.7
1,375,698	-		LRK53_RS05955	0.53	-2.3
1,375,698	-		LRK53_RS05955	0.53	-0.3
1,375,698	-		LRK53_RS05955	0.53	-1.7
1,375,708	+		LRK53_RS05955	0.56	-1.1
1,375,708	+		LRK53_RS05955	0.56	-1.5
1,375,708	+		LRK53_RS05955	0.56	-1.1
1,375,709	-		LRK53_RS05955	0.57	-0.7
1,375,712	+		LRK53_RS05955	0.57	+0.9
1,375,712	+		LRK53_RS05955	0.57	-0.1
1,375,712	+		LRK53_RS05955	0.57	-0.7
1,375,712	+		LRK53_RS05955	0.57	+0.1
1,375,712	+		LRK53_RS05955	0.57	+0.9
1,375,712	+		LRK53_RS05955	0.57	-0.9
1,375,712	+		LRK53_RS05955	0.57	-1.1
1,375,712	+		LRK53_RS05955	0.57	-1.6
1,375,712	+		LRK53_RS05955	0.57	+0.2
1,375,712	+		LRK53_RS05955	0.57	-0.4
1,375,712	+		LRK53_RS05955	0.57	-1.5
1,375,712	+		LRK53_RS05955	0.57	+0.2
1,375,713	-		LRK53_RS05955	0.58	-0.7
1,375,713	-		LRK53_RS05955	0.58	-0.7
1,375,713	-		LRK53_RS05955	0.58	+0.9
1,375,713	-		LRK53_RS05955	0.58	-1.3
1,375,713	-		LRK53_RS05955	0.58	+1.4
1,375,713	-		LRK53_RS05955	0.58	-0.1
1,375,713	-		LRK53_RS05955	0.58	-0.4
1,375,713	-		LRK53_RS05955	0.58	-0.1
1,375,713	-		LRK53_RS05955	0.58	+0.9
1,375,713	-		LRK53_RS05955	0.58	+1.9
1,375,713	-		LRK53_RS05955	0.58	-0.7
1,375,713	-		LRK53_RS05955	0.58	-2.5
1,375,713	-		LRK53_RS05955	0.58	+1.4
1,375,713	-		LRK53_RS05955	0.58	-1.9
1,375,713	-		LRK53_RS05955	0.58	-0.6
1,375,713	-		LRK53_RS05955	0.58	-0.7
1,375,713	-		LRK53_RS05955	0.58	-1.4
1,375,713	-		LRK53_RS05955	0.58	-0.5
1,375,713	-		LRK53_RS05955	0.58	-0.1
1,375,819	+				-0.9
1,375,819	+				+0.9
1,375,819	+				-0.1
1,375,819	+				-1.1
1,375,819	+				-0.3
1,375,820	-				+0.5
1,375,820	-				-0.1
1,375,820	-				-1.3
1,375,820	-				-0.6
1,375,838	+				-0.7
1,375,839	-				+0.9
1,375,839	-				+1.9
1,375,857	+				-1.0
1,375,857	+				+0.9
1,375,857	+				-1.3
1,375,857	+				-0.7
1,375,857	+				+0.3
1,375,857	+				-0.1
1,375,857	+				-0.5
1,375,857	+				-1.1
1,375,857	+				-0.1
1,375,857	+				-0.9
1,375,857	+				-0.2
1,375,857	+				-0.3
1,375,857	+				-0.9
1,375,857	+				-0.1
1,375,857	+				-1.3
1,375,857	+				-0.4
1,375,857	+				-0.3
1,375,857	+				+0.6
1,375,857	+				-1.2
1,375,857	+				+0.9
1,375,857	+				-1.1
1,375,857	+				+0.1
1,375,857	+				+0.9
1,375,857	+				-0.2
1,375,857	+				+0.9
1,375,857	+				-2.1
1,375,857	+				-1.6
1,375,857	+				+1.4
1,375,857	+				-0.7
1,375,857	+				-0.7
1,375,857	+				-0.3
1,375,858	-				-0.2
1,375,858	-				+0.4
1,375,858	-				-0.5
1,375,858	-				+0.3
1,375,858	-				-1.1
1,375,858	-				-0.1
1,375,858	-				-1.5
1,375,858	-				-0.7
1,375,858	-				+0.9
1,375,858	-				-0.1
1,375,858	-				+0.3
1,375,858	-				-0.1
1,375,858	-				-0.3
1,375,858	-				+0.7
1,375,858	-				+0.1
1,375,858	-				-2.3
1,375,858	-				+1.3
1,375,858	-				-0.7
1,375,858	-				-0.7
1,375,858	-				-0.5
1,375,858	-				+0.9
1,375,858	-				-1.1
1,375,858	-				+0.9
1,375,858	-				+0.6
1,375,858	-				-0.1
1,375,859	+				-1.7
1,375,859	+				+0.3
1,375,859	+				-1.9
1,375,859	+				+0.9
1,375,859	+				-0.9
1,375,859	+				-0.1
1,375,859	+				-0.7
1,375,859	+				-1.0
1,375,859	+				+0.3
1,375,859	+				+0.4
1,375,859	+				+0.9
1,375,859	+				-1.3
1,375,859	+				-0.8
1,375,859	+				+0.0
1,375,859	+				-2.5
1,375,859	+				-2.1
1,375,859	+				+0.9
1,375,859	+				-1.1
1,375,859	+				-0.6
1,375,859	+				-1.8
1,375,859	+				-1.1
1,375,859	+				+0.9
1,375,859	+				-0.9
1,375,859	+				+0.9
1,375,859	+				+1.4
1,375,859	+				+0.4
1,375,859	+				-0.7
1,375,859	+				+0.3
1,375,859	+				-2.8
1,375,859	+				-0.7
1,375,859	+				-0.5
1,375,859	+				+0.9
1,375,859	+				+0.9
1,375,859	+				-0.2
1,375,859	+				-0.1
1,375,859	+				-0.7
1,375,859	+				+0.9
1,375,859	+				-1.7
1,375,859	+				-2.1
1,375,859	+				+1.9
1,375,859	+				-0.7
1,375,859	+				-2.1
1,375,859	+				-1.6
1,375,859	+				-0.9
1,375,860	-				+0.9
1,375,860	-				-0.7
1,375,860	-				-0.9
1,375,860	-				-1.3
1,375,860	-				-0.1
1,375,860	-				-2.3
1,375,860	-				-0.1
1,375,860	-				-1.5
1,375,860	-				-1.7
1,375,860	-				-1.1
1,375,860	-				-0.1
1,375,860	-				-1.1
1,375,860	-				-0.1
1,375,860	-				-1.1
1,375,860	-				-0.1
1,375,860	-				+0.9
1,375,860	-				-2.3
1,375,860	-				+0.9
1,375,860	-				+1.4
1,375,860	-				+0.9
1,375,860	-				+2.9
1,375,860	-				-0.6
1,375,860	-				-0.9
1,375,860	-				-0.1
1,375,860	-				-0.1
1,375,860	-				+1.9
1,375,860	-				-1.0
1,375,860	-				-0.6
1,375,860	-				-1.1
1,375,860	-				-0.6
1,375,860	-				-1.1
1,375,860	-				+1.9
1,375,860	-				-1.3
1,375,860	-				-2.5
1,375,860	-				-0.7
1,375,860	-				-0.6
1,375,860	-				-1.5
1,375,860	-				-0.7
1,375,860	-				+0.3
1,375,860	-				-0.5
1,375,860	-				-1.5
1,375,860	-				-0.1
1,375,860	-				+0.9
1,375,860	-				+0.9
1,375,860	-				+1.9
1,375,860	-				-0.0
1,375,860	-				-1.9
1,375,860	-				-0.7
1,375,860	-				+0.1
1,375,860	-				-0.7
1,375,860	-				-0.1
1,375,860	-				-0.7
1,375,860	-				+0.9
1,375,860	-				-0.7
1,375,860	-				+1.4
1,375,861	+				+0.3
1,375,861	+				+0.9
1,375,861	+				-0.8
1,375,861	+				-0.1
1,375,861	+				+0.4
1,375,861	+				+1.6
1,375,861	+				-1.9
1,375,861	+				-1.4
1,375,861	+				-0.7
1,375,861	+				+0.9
1,375,861	+				-1.9
1,375,861	+				-0.6
1,375,861	+				+0.4
1,375,861	+				-1.1
1,375,861	+				-1.9
1,375,861	+				+0.9
1,375,861	+				-0.7
1,375,861	+				+0.1
1,375,861	+				-0.6
1,375,861	+				+0.3
1,375,861	+				-1.0
1,375,861	+				-1.1
1,375,861	+				-0.1
1,375,861	+				-0.7
1,375,861	+				+0.5
1,375,861	+				-0.6
1,375,862	-				-1.5
1,375,862	-				-1.9
1,375,862	-				-0.1
1,375,862	-				-1.5
1,375,862	-				+1.9
1,375,862	-				-0.0
1,375,862	-				-0.9
1,375,862	-				-1.6
1,375,862	-				-0.7
1,375,862	-				+0.9
1,375,862	-				-2.0
1,376,216	+				-0.7
1,376,216	+				+0.3
1,376,216	+				-2.1
1,376,216	+				+0.9
1,376,216	+				-1.5
1,376,216	+				-2.0
1,376,216	+				-1.3
1,376,216	+				+0.3
1,376,216	+				+1.1
1,376,216	+				-2.5
1,376,216	+				-0.7
1,376,217	-				-0.1
1,376,217	-				-1.5
1,376,217	-				-1.7
1,376,217	-				-0.1
1,376,217	-				+0.3
1,376,217	-				-0.8
1,376,277	+				-0.1
1,376,277	+				-1.5
1,376,277	+				-1.1
1,376,287	+				-1.1
1,376,287	+				-0.1
1,376,288	-				-0.7
1,376,288	-				-2.1
1,376,304	-				+0.9
1,376,304	-				-0.9
1,376,304	-				+0.3
1,376,304	-				-0.1
1,376,478	+				-0.1
1,376,478	+				+1.9
1,376,478	+				+0.1
1,376,478	+				-0.5
1,376,478	+				-0.2
1,376,478	+				-0.9
1,376,478	+				+1.4
1,376,478	+				-2.1
1,376,479	-				-1.7
1,376,479	-				-0.4
1,376,479	-				-0.5
1,376,479	-				-0.1
1,376,479	-				-0.9
1,376,479	-				-1.5
1,376,479	-				-0.5
1,376,479	-				-0.1
1,376,688	+		LRK53_RS05965	0.21	-2.9
1,376,689	-		LRK53_RS05965	0.21	-3.4
1,376,689	-		LRK53_RS05965	0.21	-0.7
1,376,689	-		LRK53_RS05965	0.21	-0.1
1,376,823	+		LRK53_RS05965	0.36	-0.7
1,376,823	+		LRK53_RS05965	0.36	-4.6
1,376,824	-		LRK53_RS05965	0.37	-2.9
1,376,895	+		LRK53_RS05965	0.45	-3.2
1,376,895	+		LRK53_RS05965	0.45	-1.1
1,376,895	+		LRK53_RS05965	0.45	+0.3
1,376,895	+		LRK53_RS05965	0.45	-2.3
1,376,895	+		LRK53_RS05965	0.45	-1.5
1,376,895	+		LRK53_RS05965	0.45	-3.9
1,376,896	-		LRK53_RS05965	0.45	+0.9
1,376,896	-		LRK53_RS05965	0.45	+0.9
1,376,896	-		LRK53_RS05965	0.45	-0.1
1,376,896	-		LRK53_RS05965	0.45	-2.6
1,376,896	-		LRK53_RS05965	0.45	-2.2
1,377,015	+		LRK53_RS05965	0.59	-0.1
1,377,066	+		LRK53_RS05965	0.65	-1.5
1,377,066	+		LRK53_RS05965	0.65	-1.5
1,377,066	+		LRK53_RS05965	0.65	-0.1
1,377,066	+		LRK53_RS05965	0.65	-1.7
1,377,066	+		LRK53_RS05965	0.65	-2.3
1,377,066	+		LRK53_RS05965	0.65	-1.7
1,377,066	+		LRK53_RS05965	0.65	-2.6
1,377,066	+		LRK53_RS05965	0.65	+0.9
1,377,066	+		LRK53_RS05965	0.65	-1.5
1,377,066	+		LRK53_RS05965	0.65	-0.7
1,377,066	+		LRK53_RS05965	0.65	-0.7
1,377,067	-		LRK53_RS05965	0.65	-1.7
1,377,067	-		LRK53_RS05965	0.65	-0.5
1,377,067	-		LRK53_RS05965	0.65	-0.7
1,377,067	-		LRK53_RS05965	0.65	-0.1
1,377,067	-		LRK53_RS05965	0.65	-2.2
1,377,067	-		LRK53_RS05965	0.65	+0.9
1,377,067	-		LRK53_RS05965	0.65	+0.9
1,377,067	-		LRK53_RS05965	0.65	-1.7
1,377,067	-		LRK53_RS05965	0.65	-1.1
1,377,067	-		LRK53_RS05965	0.65	-3.8
1,377,067	-		LRK53_RS05965	0.65	+0.1
1,377,067	-		LRK53_RS05965	0.65	-1.7
1,377,067	-		LRK53_RS05965	0.65	-0.5
1,377,067	-		LRK53_RS05965	0.65	-1.1
1,377,067	-		LRK53_RS05965	0.65	-1.1
1,377,067	-		LRK53_RS05965	0.65	-2.6
1,377,067	-		LRK53_RS05965	0.65	-1.1
1,377,067	-		LRK53_RS05965	0.65	-3.8
1,377,168	+		LRK53_RS05965	0.77	-1.1
1,377,168	+		LRK53_RS05965	0.77	-0.7
1,377,168	+		LRK53_RS05965	0.77	-1.1
1,377,168	+		LRK53_RS05965	0.77	-1.5
1,377,169	-		LRK53_RS05965	0.77	+0.9
1,377,169	-		LRK53_RS05965	0.77	-2.7
1,377,169	-		LRK53_RS05965	0.77	-1.7
1,377,169	-		LRK53_RS05965	0.77	-1.7
1,377,231	+		LRK53_RS05965	0.84	-2.9
1,377,231	+		LRK53_RS05965	0.84	-0.1
1,377,231	+		LRK53_RS05965	0.84	-1.5
1,377,231	+		LRK53_RS05965	0.84	-0.7
1,377,231	+		LRK53_RS05965	0.84	-0.7
1,377,232	-		LRK53_RS05965	0.84	-1.5
1,377,232	-		LRK53_RS05965	0.84	+0.9
1,377,232	-		LRK53_RS05965	0.84	-1.1
1,377,232	-		LRK53_RS05965	0.84	-1.7
1,377,232	-		LRK53_RS05965	0.84	-2.3
1,377,232	-		LRK53_RS05965	0.84	-1.7
1,377,232	-		LRK53_RS05965	0.84	-2.6
1,377,232	-		LRK53_RS05965	0.84	-1.8
1,377,232	-		LRK53_RS05965	0.84	-2.7
1,377,349	-				-1.7
1,377,349	-				-0.7
1,377,349	-				-3.2
1,377,514	+		LRK53_RS05970	0.13	-1.5
1,377,540	-		LRK53_RS05970	0.16	-1.4
1,377,585	-		LRK53_RS05970	0.20	-1.6
1,377,585	-		LRK53_RS05970	0.20	-0.7
1,377,703	+		LRK53_RS05970	0.30	-1.7
1,377,703	+		LRK53_RS05970	0.30	-1.9
1,377,703	+		LRK53_RS05970	0.30	-2.0
1,377,704	-		LRK53_RS05970	0.30	-1.1
1,377,704	-		LRK53_RS05970	0.30	-0.1
1,377,742	+		LRK53_RS05970	0.33	-1.0
1,377,743	-		LRK53_RS05970	0.33	-2.5
1,377,843	+		LRK53_RS05970	0.42	+0.9
1,377,843	+		LRK53_RS05970	0.42	+0.9
1,378,024	+		LRK53_RS05970	0.57	-0.9
1,378,189	+		LRK53_RS05970	0.72	-1.7
1,378,189	+		LRK53_RS05970	0.72	-3.1
1,378,189	+		LRK53_RS05970	0.72	-3.4
1,378,204	-		LRK53_RS05970	0.73	-1.9
1,378,204	-		LRK53_RS05970	0.73	-3.7
1,378,204	-		LRK53_RS05970	0.73	+0.9
1,378,209	+		LRK53_RS05970	0.73	-0.1
1,378,209	+		LRK53_RS05970	0.73	-1.1
1,378,209	+		LRK53_RS05970	0.73	-0.7
1,378,209	+		LRK53_RS05970	0.73	-3.8
1,378,209	+		LRK53_RS05970	0.73	-0.9
1,378,209	+		LRK53_RS05970	0.73	-1.8
1,378,209	+		LRK53_RS05970	0.73	-0.1
1,378,209	+		LRK53_RS05970	0.73	-2.1
1,378,209	+		LRK53_RS05970	0.73	-0.9
1,378,209	+		LRK53_RS05970	0.73	-2.1
1,378,209	+		LRK53_RS05970	0.73	-0.1
1,378,209	+		LRK53_RS05970	0.73	-1.6
1,378,209	+		LRK53_RS05970	0.73	-1.7
1,378,209	+		LRK53_RS05970	0.73	+0.9
1,378,209	+		LRK53_RS05970	0.73	+0.9
1,378,209	+		LRK53_RS05970	0.73	-0.1
1,378,209	+		LRK53_RS05970	0.73	-2.1
1,378,209	+		LRK53_RS05970	0.73	-3.1
1,378,209	+		LRK53_RS05970	0.73	-0.7
1,378,209	+		LRK53_RS05970	0.73	-1.7
1,378,209	+		LRK53_RS05970	0.73	-4.0
1,378,209	+		LRK53_RS05970	0.73	-1.9
1,378,209	+		LRK53_RS05970	0.73	+0.9
1,378,209	+		LRK53_RS05970	0.73	+0.9
1,378,209	+		LRK53_RS05970	0.73	+0.4
1,378,209	+		LRK53_RS05970	0.73	-1.7
1,378,209	+		LRK53_RS05970	0.73	+0.3
1,378,210	-		LRK53_RS05970	0.73	-0.1
1,378,210	-		LRK53_RS05970	0.73	-1.1
1,378,210	-		LRK53_RS05970	0.73	-1.8
1,378,210	-		LRK53_RS05970	0.73	-3.0
1,378,210	-		LRK53_RS05970	0.73	-0.1
1,378,210	-		LRK53_RS05970	0.73	-1.1
1,378,210	-		LRK53_RS05970	0.73	+1.9
1,378,210	-		LRK53_RS05970	0.73	-2.1
1,378,210	-		LRK53_RS05970	0.73	-1.7
1,378,210	-		LRK53_RS05970	0.73	-1.7
1,378,210	-		LRK53_RS05970	0.73	-3.0
1,378,210	-		LRK53_RS05970	0.73	-1.1
1,378,210	-		LRK53_RS05970	0.73	-3.2
1,378,210	-		LRK53_RS05970	0.73	-1.6
1,378,210	-		LRK53_RS05970	0.73	-2.8
1,378,210	-		LRK53_RS05970	0.73	-2.5
1,378,210	-		LRK53_RS05970	0.73	-1.5
1,378,210	-		LRK53_RS05970	0.73	-1.5
1,378,210	-		LRK53_RS05970	0.73	-1.1
1,378,210	-		LRK53_RS05970	0.73	+0.9
1,378,210	-		LRK53_RS05970	0.73	-3.9
1,378,259	+		LRK53_RS05970	0.78	+0.9
1,378,259	+		LRK53_RS05970	0.78	-2.6
1,378,260	-		LRK53_RS05970	0.78	-0.6
1,378,260	-		LRK53_RS05970	0.78	-2.2
1,378,260	-		LRK53_RS05970	0.78	-1.9
1,378,291	-		LRK53_RS05970	0.80	-0.7
1,378,291	-		LRK53_RS05970	0.80	-0.1