Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05840

Experiment: defined media with 20AA_mix

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with 20AA_mix
1,353,800	+				-1.1
1,353,800	+				-0.1
1,353,800	+				-0.5
1,353,801	-				-1.1
1,353,801	-				-0.5
1,353,905	+				-0.1
1,353,905	+				-1.5
1,353,905	+				-0.1
1,353,905	+				-0.7
1,353,905	+				-1.6
1,353,905	+				-2.1
1,353,905	+				+0.9
1,353,905	+				-1.5
1,353,905	+				-0.5
1,353,906	-				-3.6
1,353,906	-				-0.7
1,353,906	-				-2.3
1,353,906	-				-1.1
1,353,906	-				-0.1
1,353,906	-				-3.1
1,353,906	-				-1.1
1,353,923	+				-2.1
1,353,923	+				-8.2
1,353,923	+				-3.5
1,353,923	+				-2.8
1,353,923	+				-1.1
1,353,923	+				-1.9
1,353,923	+				-1.1
1,353,923	+				-2.5
1,353,923	+				-2.3
1,353,923	+				+0.9
1,353,923	+				-3.5
1,353,923	+				-1.1
1,353,923	+				-3.3
1,353,923	+				-2.9
1,353,923	+				-0.1
1,353,923	+				-1.5
1,353,923	+				-2.5
1,353,924	-				+0.9
1,353,924	-				-3.1
1,353,924	-				-2.6
1,353,924	-				-3.0
1,353,924	-				-3.3
1,353,924	-				-0.1
1,353,938	+				-2.1
1,353,938	+				+0.9
1,353,938	+				-1.5
1,353,938	+				-2.6
1,353,938	+				-3.1
1,353,938	+				-1.1
1,353,938	+				-2.1
1,353,938	+				-4.3
1,353,938	+				-2.5
1,353,938	+				-0.1
1,353,938	+				-1.5
1,353,938	+				-1.7
1,353,938	+				-4.3
1,353,938	+				-1.1
1,353,938	+				-2.9
1,353,938	+				-2.6
1,353,938	+				-0.7
1,353,938	+				-2.7
1,353,938	+				-1.7
1,353,938	+				+0.9
1,353,938	+				-1.7
1,353,938	+				+0.9
1,353,938	+				-2.5
1,353,938	+				-5.9
1,353,938	+				-1.9
1,353,938	+				+0.9
1,353,938	+				-0.1
1,353,938	+				-6.4
1,353,938	+				-2.5
1,353,938	+				-1.1
1,353,938	+				-0.1
1,353,938	+				-1.5
1,353,938	+				-0.7
1,353,938	+				-4.7
1,353,938	+				-1.1
1,353,938	+				-4.9
1,353,938	+				-1.9
1,353,938	+				-4.1
1,353,938	+				-2.5
1,353,939	-				-2.5
1,353,939	-				-0.1
1,353,939	-				-2.7
1,353,939	-				-1.5
1,353,939	-				-5.9
1,353,939	-				+0.9
1,353,939	-				-1.9
1,353,939	-				+0.9
1,353,939	-				-1.1
1,353,939	-				+0.9
1,353,939	-				-2.7
1,353,939	-				-3.6
1,353,939	-				-4.0
1,353,939	-				-0.1
1,353,939	-				-2.8
1,353,939	-				+0.9
1,353,939	-				-2.9
1,353,939	-				-4.7
1,353,939	-				+0.9
1,353,939	-				-3.3
1,353,939	-				-2.3
1,353,939	-				-0.7
1,353,939	-				-2.1
1,353,939	-				-0.7
1,353,939	-				+0.9
1,353,939	-				-4.8
1,353,939	-				-0.1
1,353,939	-				-2.7
1,353,939	-				-5.0
1,353,939	-				-1.9
1,353,939	-				-0.1
1,353,939	-				-2.1
1,353,939	-				-0.7
1,353,939	-				-1.9
1,353,939	-				-0.7
1,354,027	+		LRK53_RS05835	0.13	-1.5
1,354,039	+		LRK53_RS05835	0.15	-1.5
1,354,039	+		LRK53_RS05835	0.15	-2.1
1,354,040	-		LRK53_RS05835	0.15	-5.2
1,354,040	-		LRK53_RS05835	0.15	-3.9
1,354,087	+		LRK53_RS05835	0.21	+0.9
1,354,087	+		LRK53_RS05835	0.21	-1.7
1,354,087	+		LRK53_RS05835	0.21	-1.5
1,354,087	+		LRK53_RS05835	0.21	-5.8
1,354,087	+		LRK53_RS05835	0.21	-1.5
1,354,087	+		LRK53_RS05835	0.21	-3.2
1,354,087	+		LRK53_RS05835	0.21	-0.1
1,354,087	+		LRK53_RS05835	0.21	-3.8
1,354,087	+		LRK53_RS05835	0.21	-1.1
1,354,087	+		LRK53_RS05835	0.21	-0.7
1,354,087	+		LRK53_RS05835	0.21	-2.1
1,354,087	+		LRK53_RS05835	0.21	-1.9
1,354,087	+		LRK53_RS05835	0.21	-1.1
1,354,087	+		LRK53_RS05835	0.21	-1.7
1,354,087	+		LRK53_RS05835	0.21	-1.5
1,354,087	+		LRK53_RS05835	0.21	-3.6
1,354,087	+		LRK53_RS05835	0.21	-2.1
1,354,087	+		LRK53_RS05835	0.21	-1.9
1,354,087	+		LRK53_RS05835	0.21	-1.1
1,354,087	+		LRK53_RS05835	0.21	-1.5
1,354,087	+		LRK53_RS05835	0.21	-4.7
1,354,087	+		LRK53_RS05835	0.21	-1.5
1,354,087	+		LRK53_RS05835	0.21	-0.7
1,354,087	+		LRK53_RS05835	0.21	-2.8
1,354,087	+		LRK53_RS05835	0.21	-0.1
1,354,087	+		LRK53_RS05835	0.21	-1.5
1,354,088	-		LRK53_RS05835	0.21	-1.1
1,354,088	-		LRK53_RS05835	0.21	-4.0
1,354,088	-		LRK53_RS05835	0.21	-1.1
1,354,088	-		LRK53_RS05835	0.21	-4.4
1,354,088	-		LRK53_RS05835	0.21	-2.6
1,354,088	-		LRK53_RS05835	0.21	-0.1
1,354,088	-		LRK53_RS05835	0.21	-1.5
1,354,088	-		LRK53_RS05835	0.21	-1.1
1,354,088	-		LRK53_RS05835	0.21	-6.0
1,354,088	-		LRK53_RS05835	0.21	-1.1
1,354,088	-		LRK53_RS05835	0.21	-3.0
1,354,088	-		LRK53_RS05835	0.21	-3.0
1,354,088	-		LRK53_RS05835	0.21	+0.9
1,354,088	-		LRK53_RS05835	0.21	+0.9
1,354,088	-		LRK53_RS05835	0.21	-6.5
1,354,088	-		LRK53_RS05835	0.21	-3.7
1,354,088	-		LRK53_RS05835	0.21	-2.9
1,354,088	-		LRK53_RS05835	0.21	-1.7
1,354,088	-		LRK53_RS05835	0.21	-2.6
1,354,088	-		LRK53_RS05835	0.21	-3.7
1,354,088	-		LRK53_RS05835	0.21	-4.3
1,354,088	-		LRK53_RS05835	0.21	-2.7
1,354,088	-		LRK53_RS05835	0.21	-3.5
1,354,249	+		LRK53_RS05835	0.43	-2.1
1,354,249	+		LRK53_RS05835	0.43	-1.9
1,354,249	+		LRK53_RS05835	0.43	-0.1
1,354,250	-		LRK53_RS05835	0.44	-1.5
1,354,250	-		LRK53_RS05835	0.44	-4.6
1,354,250	-		LRK53_RS05835	0.44	-3.3
1,354,410	-		LRK53_RS05835	0.65	-1.7
1,354,503	+		LRK53_RS05835	0.78	-5.0
1,354,503	+		LRK53_RS05835	0.78	-1.1
1,354,503	+		LRK53_RS05835	0.78	-2.1
1,354,503	+		LRK53_RS05835	0.78	-0.7
1,354,503	+		LRK53_RS05835	0.78	-1.5
1,354,503	+		LRK53_RS05835	0.78	-3.4
1,354,503	+		LRK53_RS05835	0.78	-2.5
1,354,503	+		LRK53_RS05835	0.78	-1.7
1,354,504	-		LRK53_RS05835	0.78	-1.5
1,354,504	-		LRK53_RS05835	0.78	-2.3
1,354,504	-		LRK53_RS05835	0.78	-3.1
1,354,504	-		LRK53_RS05835	0.78	-3.0
1,354,504	-		LRK53_RS05835	0.78	-1.5
1,354,504	-		LRK53_RS05835	0.78	-4.0
1,354,504	-		LRK53_RS05835	0.78	-3.7
1,354,504	-		LRK53_RS05835	0.78	-3.3
1,354,504	-		LRK53_RS05835	0.78	-1.9
1,354,504	-		LRK53_RS05835	0.78	-0.5
1,354,504	-		LRK53_RS05835	0.78	+0.9
1,354,504	-		LRK53_RS05835	0.78	-1.9
1,354,540	+		LRK53_RS05835	0.83	-1.7
1,354,540	+		LRK53_RS05835	0.83	-1.7
1,354,540	+		LRK53_RS05835	0.83	-0.1
1,354,540	+		LRK53_RS05835	0.83	-1.1
1,354,540	+		LRK53_RS05835	0.83	-0.7
1,354,540	+		LRK53_RS05835	0.83	-2.3
1,354,540	+		LRK53_RS05835	0.83	-0.1
1,354,540	+		LRK53_RS05835	0.83	-1.5
1,354,540	+		LRK53_RS05835	0.83	-7.9
1,354,540	+		LRK53_RS05835	0.83	+0.9
1,354,541	-		LRK53_RS05835	0.83	-2.1
1,354,541	-		LRK53_RS05835	0.83	-1.1
1,354,541	-		LRK53_RS05835	0.83	-2.5
1,354,541	-		LRK53_RS05835	0.83	-1.9
1,354,541	-		LRK53_RS05835	0.83	-1.7
1,354,541	-		LRK53_RS05835	0.83	-1.9
1,354,541	-		LRK53_RS05835	0.83	-2.3
1,354,541	-		LRK53_RS05835	0.83	-0.1
1,354,541	-		LRK53_RS05835	0.83	-1.1
1,354,586	+		LRK53_RS05835	0.89	-0.7
1,354,586	+		LRK53_RS05835	0.89	-1.5
1,354,586	+		LRK53_RS05835	0.89	-2.5
1,354,586	+		LRK53_RS05835	0.89	+0.9
1,354,586	+		LRK53_RS05835	0.89	-1.1
1,354,586	+		LRK53_RS05835	0.89	-3.4
1,354,586	+		LRK53_RS05835	0.89	-1.5
1,354,587	-		LRK53_RS05835	0.90	-2.3
1,354,587	-		LRK53_RS05835	0.90	-2.5
1,354,587	-		LRK53_RS05835	0.90	-1.5
1,354,686	+				-1.9
1,354,686	+				-0.1
1,354,686	+				+0.1
1,354,686	+				+0.0
1,354,687	-				-0.1
1,354,687	-				-0.1
1,354,687	-				+0.6
1,354,700	+				+0.9
1,354,700	+				+0.9
1,354,700	+				-0.3
1,354,700	+				-0.1
1,354,700	+				-1.0
1,354,700	+				-0.6
1,354,701	-				+0.2
1,354,701	-				+1.3
1,354,701	-				+0.9
1,354,701	-				+0.2
1,354,701	-				-1.1
1,354,816	+		LRK53_RS05840	0.11	+0.9
1,354,816	+		LRK53_RS05840	0.11	+0.6
1,354,816	+		LRK53_RS05840	0.11	-0.5
1,354,816	+		LRK53_RS05840	0.11	+0.9
1,354,816	+		LRK53_RS05840	0.11	-0.1
1,354,816	+		LRK53_RS05840	0.11	+1.9
1,354,817	-		LRK53_RS05840	0.11	+1.1
1,354,817	-		LRK53_RS05840	0.11	+0.6
1,354,817	-		LRK53_RS05840	0.11	+0.1
1,354,817	-		LRK53_RS05840	0.11	+0.3
1,354,817	-		LRK53_RS05840	0.11	-0.4
1,354,817	-		LRK53_RS05840	0.11	-0.1
1,355,056	+		LRK53_RS05840	0.35	+0.2
1,355,056	+		LRK53_RS05840	0.35	-0.9
1,355,056	+		LRK53_RS05840	0.35	-0.1
1,355,056	+		LRK53_RS05840	0.35	+0.6
1,355,056	+		LRK53_RS05840	0.35	+0.6
1,355,056	+		LRK53_RS05840	0.35	+0.9
1,355,057	-		LRK53_RS05840	0.35	-0.4
1,355,057	-		LRK53_RS05840	0.35	+1.9
1,355,057	-		LRK53_RS05840	0.35	+0.9
1,355,057	-		LRK53_RS05840	0.35	+0.9
1,355,057	-		LRK53_RS05840	0.35	-0.1
1,355,281	+		LRK53_RS05840	0.57	+0.9
1,355,281	+		LRK53_RS05840	0.57	+0.9
1,355,282	-		LRK53_RS05840	0.57	+2.0
1,355,282	-		LRK53_RS05840	0.57	+0.6
1,355,282	-		LRK53_RS05840	0.57	-0.0
1,355,282	-		LRK53_RS05840	0.57	+0.9
1,355,282	-		LRK53_RS05840	0.57	+0.5
1,355,282	-		LRK53_RS05840	0.57	-0.1
1,355,480	+		LRK53_RS05840	0.76	+1.9
1,355,480	+		LRK53_RS05840	0.76	+0.9
1,355,480	+		LRK53_RS05840	0.76	+1.2
1,355,481	-		LRK53_RS05840	0.76	-0.8
1,355,722	+				-1.4
1,355,722	+				-1.4
1,355,722	+				+0.1
1,355,723	-				+0.3
1,356,519	+		LRK53_RS05845	0.87	-0.8
1,356,519	+		LRK53_RS05845	0.87	-2.3
1,356,519	+		LRK53_RS05845	0.87	-1.9
1,356,519	+		LRK53_RS05845	0.87	+0.3
1,356,519	+		LRK53_RS05845	0.87	-0.1
1,356,519	+		LRK53_RS05845	0.87	-0.7
1,356,519	+		LRK53_RS05845	0.87	-0.5
1,356,519	+		LRK53_RS05845	0.87	-0.1
1,356,519	+		LRK53_RS05845	0.87	+0.9
1,356,519	+		LRK53_RS05845	0.87	+0.3
1,356,519	+		LRK53_RS05845	0.87	+0.3
1,356,519	+		LRK53_RS05845	0.87	+0.9
1,356,519	+		LRK53_RS05845	0.87	+0.9
1,356,519	+		LRK53_RS05845	0.87	-1.2
1,356,519	+		LRK53_RS05845	0.87	+0.1
1,356,519	+		LRK53_RS05845	0.87	-0.5
1,356,519	+		LRK53_RS05845	0.87	-1.7
1,356,519	+		LRK53_RS05845	0.87	-0.0
1,356,519	+		LRK53_RS05845	0.87	-1.1
1,356,519	+		LRK53_RS05845	0.87	-0.8
1,356,519	+		LRK53_RS05845	0.87	-1.1
1,356,519	+		LRK53_RS05845	0.87	-0.7
1,356,519	+		LRK53_RS05845	0.87	-0.9
1,356,519	+		LRK53_RS05845	0.87	-0.1
1,356,519	+		LRK53_RS05845	0.87	-1.0
1,356,519	+		LRK53_RS05845	0.87	-0.9
1,356,520	-		LRK53_RS05845	0.87	-0.1
1,356,520	-		LRK53_RS05845	0.87	-1.2
1,356,520	-		LRK53_RS05845	0.87	-1.6
1,356,520	-		LRK53_RS05845	0.87	-0.1
1,356,520	-		LRK53_RS05845	0.87	+0.4
1,356,520	-		LRK53_RS05845	0.87	+0.5
1,356,520	-		LRK53_RS05845	0.87	-0.9
1,356,520	-		LRK53_RS05845	0.87	-0.6
1,356,520	-		LRK53_RS05845	0.87	-1.1
1,356,520	-		LRK53_RS05845	0.87	-0.7
1,356,520	-		LRK53_RS05845	0.87	+0.3
1,356,520	-		LRK53_RS05845	0.87	+0.1
1,356,520	-		LRK53_RS05845	0.87	-0.6
1,356,520	-		LRK53_RS05845	0.87	-0.5
1,356,520	-		LRK53_RS05845	0.87	-0.4
1,356,520	-		LRK53_RS05845	0.87	-0.5
1,356,520	-		LRK53_RS05845	0.87	-1.7
1,356,520	-		LRK53_RS05845	0.87	-0.9
1,356,520	-		LRK53_RS05845	0.87	-0.9
1,356,520	-		LRK53_RS05845	0.87	-0.5
1,356,520	-		LRK53_RS05845	0.87	-0.1
1,356,520	-		LRK53_RS05845	0.87	-1.1
1,356,520	-		LRK53_RS05845	0.87	-1.5
1,356,520	-		LRK53_RS05845	0.87	-1.5
1,356,520	-		LRK53_RS05845	0.87	-1.1
1,356,561	+				-1.1
1,356,561	+				-1.4
1,356,561	+				-1.0
1,356,562	-				+0.4
1,356,562	-				+0.9
1,356,562	-				-1.3
1,356,672	+				-0.6
1,356,672	+				+2.2
1,356,673	-				-0.1
1,356,673	-				-1.4
1,356,673	-				-0.1
1,356,673	-				-0.1
1,356,702	+				-0.1
1,356,702	+				+0.9
1,356,702	+				-0.1
1,356,702	+				-1.9
1,356,702	+				+2.0
1,356,702	+				-0.5
1,356,702	+				-1.5
1,356,702	+				-1.5
1,356,702	+				-0.1
1,356,703	-				-1.1
1,356,703	-				+0.9
1,356,703	-				-0.4
1,356,703	-				-0.9
1,356,703	-				-1.1
1,356,703	-				-0.6
1,356,703	-				-0.1
1,356,703	-				+0.4
1,356,703	-				+1.9
1,356,703	-				-1.1
1,356,703	-				-0.5
1,356,703	-				-1.1
1,356,703	-				-1.7
1,356,703	-				-1.8