Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04705

Experiment: defined media with 20AA_mix

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with 20AA_mix
1,094,830	+		LRK53_RS04700	0.38	+0.9
1,094,830	+		LRK53_RS04700	0.38	-0.7
1,094,830	+		LRK53_RS04700	0.38	-2.4
1,094,831	-		LRK53_RS04700	0.38	-1.4
1,094,973	+		LRK53_RS04700	0.50	+0.9
1,094,973	+		LRK53_RS04700	0.50	-0.7
1,094,973	+		LRK53_RS04700	0.50	+1.9
1,094,973	+		LRK53_RS04700	0.50	-0.1
1,094,973	+		LRK53_RS04700	0.50	-1.4
1,094,973	+		LRK53_RS04700	0.50	-0.7
1,094,973	+		LRK53_RS04700	0.50	-1.1
1,094,974	-		LRK53_RS04700	0.50	-1.4
1,094,974	-		LRK53_RS04700	0.50	-1.1
1,094,974	-		LRK53_RS04700	0.50	-2.6
1,094,974	-		LRK53_RS04700	0.50	-2.5
1,095,093	+		LRK53_RS04700	0.60	-1.6
1,095,093	+		LRK53_RS04700	0.60	+0.3
1,095,093	+		LRK53_RS04700	0.60	-1.4
1,095,093	+		LRK53_RS04700	0.60	-1.3
1,095,093	+		LRK53_RS04700	0.60	-1.8
1,095,093	+		LRK53_RS04700	0.60	-0.4
1,095,093	+		LRK53_RS04700	0.60	+0.9
1,095,093	+		LRK53_RS04700	0.60	-0.7
1,095,093	+		LRK53_RS04700	0.60	-0.7
1,095,093	+		LRK53_RS04700	0.60	-1.9
1,095,093	+		LRK53_RS04700	0.60	-1.0
1,095,093	+		LRK53_RS04700	0.60	-0.1
1,095,094	-		LRK53_RS04700	0.60	-1.1
1,095,094	-		LRK53_RS04700	0.60	-1.4
1,095,094	-		LRK53_RS04700	0.60	+1.3
1,095,094	-		LRK53_RS04700	0.60	-0.3
1,095,094	-		LRK53_RS04700	0.60	-2.6
1,095,094	-		LRK53_RS04700	0.60	+0.9
1,095,094	-		LRK53_RS04700	0.60	-0.5
1,095,094	-		LRK53_RS04700	0.60	-1.1
1,095,204	+		LRK53_RS04700	0.70	-0.9
1,095,204	+		LRK53_RS04700	0.70	-0.7
1,095,204	+		LRK53_RS04700	0.70	-1.6
1,095,204	+		LRK53_RS04700	0.70	-0.4
1,095,204	+		LRK53_RS04700	0.70	-0.7
1,095,204	+		LRK53_RS04700	0.70	-0.1
1,095,204	+		LRK53_RS04700	0.70	-0.1
1,095,204	+		LRK53_RS04700	0.70	-1.1
1,095,204	+		LRK53_RS04700	0.70	-0.7
1,095,204	+		LRK53_RS04700	0.70	+0.9
1,095,204	+		LRK53_RS04700	0.70	+0.9
1,095,204	+		LRK53_RS04700	0.70	-1.1
1,095,204	+		LRK53_RS04700	0.70	-0.9
1,095,204	+		LRK53_RS04700	0.70	-1.3
1,095,204	+		LRK53_RS04700	0.70	-1.4
1,095,204	+		LRK53_RS04700	0.70	+2.5
1,095,204	+		LRK53_RS04700	0.70	-1.9
1,095,204	+		LRK53_RS04700	0.70	-1.9
1,095,204	+		LRK53_RS04700	0.70	-1.7
1,095,204	+		LRK53_RS04700	0.70	-0.5
1,095,204	+		LRK53_RS04700	0.70	-0.7
1,095,204	+		LRK53_RS04700	0.70	-0.7
1,095,205	-		LRK53_RS04700	0.70	-1.4
1,095,205	-		LRK53_RS04700	0.70	-2.6
1,095,205	-		LRK53_RS04700	0.70	+0.6
1,095,205	-		LRK53_RS04700	0.70	-0.9
1,095,205	-		LRK53_RS04700	0.70	-1.4
1,095,205	-		LRK53_RS04700	0.70	-1.1
1,095,205	-		LRK53_RS04700	0.70	-0.1
1,095,205	-		LRK53_RS04700	0.70	-0.1
1,095,205	-		LRK53_RS04700	0.70	-0.3
1,095,205	-		LRK53_RS04700	0.70	+0.3
1,095,205	-		LRK53_RS04700	0.70	-0.6
1,095,205	-		LRK53_RS04700	0.70	-1.3
1,095,205	-		LRK53_RS04700	0.70	-1.4
1,095,205	-		LRK53_RS04700	0.70	-1.1
1,095,205	-		LRK53_RS04700	0.70	-1.1
1,095,205	-		LRK53_RS04700	0.70	-0.9
1,095,208	-		LRK53_RS04700	0.70	-1.3
1,095,336	+		LRK53_RS04700	0.81	-1.9
1,095,337	-		LRK53_RS04700	0.81	-0.7
1,095,337	-		LRK53_RS04700	0.81	+1.9
1,096,072	+		LRK53_RS04705	0.47	+0.9
1,096,072	+		LRK53_RS04705	0.47	-1.4
1,096,072	+		LRK53_RS04705	0.47	-0.9
1,096,073	-		LRK53_RS04705	0.47	+0.9
1,096,073	-		LRK53_RS04705	0.47	-1.1
1,096,073	-		LRK53_RS04705	0.47	-2.3
1,096,073	-		LRK53_RS04705	0.47	-0.7
1,096,073	-		LRK53_RS04705	0.47	-0.7
1,096,142	+		LRK53_RS04705	0.53	-0.1
1,096,142	+		LRK53_RS04705	0.53	-0.9
1,096,196	+		LRK53_RS04705	0.58	-0.0
1,096,196	+		LRK53_RS04705	0.58	-0.7
1,096,197	-		LRK53_RS04705	0.59	-0.3
1,096,197	-		LRK53_RS04705	0.59	-1.4
1,096,197	-		LRK53_RS04705	0.59	-1.1
1,096,197	-		LRK53_RS04705	0.59	-1.0
1,096,199	-		LRK53_RS04705	0.59	+0.9
1,096,199	-		LRK53_RS04705	0.59	-2.7
1,096,380	+		LRK53_RS04705	0.75	-3.3
1,096,380	+		LRK53_RS04705	0.75	-2.7
1,096,380	+		LRK53_RS04705	0.75	+0.5
1,096,380	+		LRK53_RS04705	0.75	-1.8
1,096,380	+		LRK53_RS04705	0.75	-0.7
1,096,380	+		LRK53_RS04705	0.75	-0.7
1,096,381	-		LRK53_RS04705	0.76	-1.1
1,096,381	-		LRK53_RS04705	0.76	-1.5
1,096,381	-		LRK53_RS04705	0.76	-0.8
1,096,381	-		LRK53_RS04705	0.76	-1.7
1,096,381	-		LRK53_RS04705	0.76	-0.3
1,096,514	+		LRK53_RS04705	0.88	+0.5
1,096,515	-		LRK53_RS04705	0.88	-1.4
1,096,515	-		LRK53_RS04705	0.88	+0.3
1,097,073	+		LRK53_RS04715	0.11	+0.5
1,097,073	+		LRK53_RS04715	0.11	-0.7
1,097,074	-		LRK53_RS04715	0.11	-1.7
1,097,074	-		LRK53_RS04715	0.11	+0.2
1,097,074	-		LRK53_RS04715	0.11	-1.1
1,097,074	-		LRK53_RS04715	0.11	-1.9
1,097,074	-		LRK53_RS04715	0.11	-0.7
1,097,074	-		LRK53_RS04715	0.11	-1.4
1,097,214	+		LRK53_RS04715	0.22	-1.7
1,097,214	+		LRK53_RS04715	0.22	+0.9
1,097,214	+		LRK53_RS04715	0.22	-2.1
1,097,214	+		LRK53_RS04715	0.22	-0.7
1,097,214	+		LRK53_RS04715	0.22	-1.1
1,097,214	+		LRK53_RS04715	0.22	+0.2
1,097,214	+		LRK53_RS04715	0.22	-1.1
1,097,214	+		LRK53_RS04715	0.22	-1.4
1,097,214	+		LRK53_RS04715	0.22	+0.2
1,097,215	-		LRK53_RS04715	0.22	-0.1
1,097,215	-		LRK53_RS04715	0.22	-0.7
1,097,215	-		LRK53_RS04715	0.22	+0.9
1,097,215	-		LRK53_RS04715	0.22	+0.9
1,097,215	-		LRK53_RS04715	0.22	-1.4
1,097,215	-		LRK53_RS04715	0.22	+1.2
1,097,215	-		LRK53_RS04715	0.22	-1.0
1,097,215	-		LRK53_RS04715	0.22	-0.5
1,097,215	-		LRK53_RS04715	0.22	-2.1
1,097,319	+		LRK53_RS04715	0.30	-1.1
1,097,319	+		LRK53_RS04715	0.30	-1.9
1,097,319	+		LRK53_RS04715	0.30	-1.5
1,097,320	-		LRK53_RS04715	0.30	-1.3
1,097,320	-		LRK53_RS04715	0.30	-0.1
1,097,320	-		LRK53_RS04715	0.30	-1.4
1,097,320	-		LRK53_RS04715	0.30	-0.1
1,097,320	-		LRK53_RS04715	0.30	-0.1
1,097,320	-		LRK53_RS04715	0.30	-1.3
1,097,339	+		LRK53_RS04715	0.31	-0.9
1,097,339	+		LRK53_RS04715	0.31	-0.8
1,097,339	+		LRK53_RS04715	0.31	+0.3
1,097,339	+		LRK53_RS04715	0.31	-0.7
1,097,340	-		LRK53_RS04715	0.31	+0.5
1,097,409	+		LRK53_RS04715	0.36	-1.0
1,097,409	+		LRK53_RS04715	0.36	-1.1
1,097,409	+		LRK53_RS04715	0.36	+0.3
1,097,409	+		LRK53_RS04715	0.36	+1.9
1,097,409	+		LRK53_RS04715	0.36	-1.8
1,097,409	+		LRK53_RS04715	0.36	+0.2
1,097,409	+		LRK53_RS04715	0.36	-0.3
1,097,409	+		LRK53_RS04715	0.36	-1.1
1,097,409	+		LRK53_RS04715	0.36	+0.0
1,097,409	+		LRK53_RS04715	0.36	-0.8
1,097,409	+		LRK53_RS04715	0.36	-0.4
1,097,409	+		LRK53_RS04715	0.36	-1.3
1,097,409	+		LRK53_RS04715	0.36	-1.1
1,097,409	+		LRK53_RS04715	0.36	-1.6
1,097,409	+		LRK53_RS04715	0.36	-0.1
1,097,409	+		LRK53_RS04715	0.36	-1.3
1,097,409	+		LRK53_RS04715	0.36	-1.1
1,097,409	+		LRK53_RS04715	0.36	-0.5
1,097,409	+		LRK53_RS04715	0.36	-2.1
1,097,409	+		LRK53_RS04715	0.36	-1.0
1,097,409	+		LRK53_RS04715	0.36	-0.1
1,097,409	+		LRK53_RS04715	0.36	-0.7
1,097,409	+		LRK53_RS04715	0.36	-0.7
1,097,409	+		LRK53_RS04715	0.36	-1.2
1,097,409	+		LRK53_RS04715	0.36	-0.7
1,097,409	+		LRK53_RS04715	0.36	+0.9
1,097,409	+		LRK53_RS04715	0.36	+0.9
1,097,409	+		LRK53_RS04715	0.36	-0.7
1,097,409	+		LRK53_RS04715	0.36	-0.1
1,097,409	+		LRK53_RS04715	0.36	-0.4
1,097,409	+		LRK53_RS04715	0.36	-1.1
1,097,409	+		LRK53_RS04715	0.36	-1.7
1,097,409	+		LRK53_RS04715	0.36	-0.1
1,097,409	+		LRK53_RS04715	0.36	-1.1
1,097,409	+		LRK53_RS04715	0.36	+0.9
1,097,409	+		LRK53_RS04715	0.36	-1.1
1,097,409	+		LRK53_RS04715	0.36	+0.3
1,097,409	+		LRK53_RS04715	0.36	-0.1
1,097,410	-		LRK53_RS04715	0.36	-1.1
1,097,410	-		LRK53_RS04715	0.36	-1.7
1,097,410	-		LRK53_RS04715	0.36	-1.9
1,097,410	-		LRK53_RS04715	0.36	+0.2
1,097,410	-		LRK53_RS04715	0.36	-1.1
1,097,410	-		LRK53_RS04715	0.36	-0.4
1,097,410	-		LRK53_RS04715	0.36	-0.4
1,097,410	-		LRK53_RS04715	0.36	-0.1
1,097,410	-		LRK53_RS04715	0.36	-0.9
1,097,410	-		LRK53_RS04715	0.36	+0.9
1,097,410	-		LRK53_RS04715	0.36	+0.5
1,097,410	-		LRK53_RS04715	0.36	-0.1
1,097,410	-		LRK53_RS04715	0.36	-0.9
1,097,410	-		LRK53_RS04715	0.36	-2.2
1,097,410	-		LRK53_RS04715	0.36	-1.1
1,097,410	-		LRK53_RS04715	0.36	-1.4
1,097,410	-		LRK53_RS04715	0.36	-0.1
1,097,410	-		LRK53_RS04715	0.36	-0.7
1,097,410	-		LRK53_RS04715	0.36	-0.9
1,097,410	-		LRK53_RS04715	0.36	-1.1
1,097,410	-		LRK53_RS04715	0.36	+0.9
1,097,410	-		LRK53_RS04715	0.36	+0.9
1,097,410	-		LRK53_RS04715	0.36	+0.3
1,097,410	-		LRK53_RS04715	0.36	+0.9
1,097,410	-		LRK53_RS04715	0.36	-1.4
1,097,442	+		LRK53_RS04715	0.39	-1.1
1,097,442	+		LRK53_RS04715	0.39	-0.8
1,097,442	+		LRK53_RS04715	0.39	-0.1
1,097,442	+		LRK53_RS04715	0.39	-0.7
1,097,442	+		LRK53_RS04715	0.39	+0.9
1,097,442	+		LRK53_RS04715	0.39	-0.7
1,097,443	-		LRK53_RS04715	0.39	+0.3
1,097,443	-		LRK53_RS04715	0.39	-1.3
1,097,592	+		LRK53_RS04715	0.50	-1.2
1,097,592	+		LRK53_RS04715	0.50	-1.0
1,097,592	+		LRK53_RS04715	0.50	-1.7
1,097,592	+		LRK53_RS04715	0.50	-2.1
1,097,592	+		LRK53_RS04715	0.50	-0.8
1,097,593	-		LRK53_RS04715	0.50	-0.7
1,097,593	-		LRK53_RS04715	0.50	-0.9
1,097,593	-		LRK53_RS04715	0.50	-1.2
1,097,593	-		LRK53_RS04715	0.50	+0.1
1,097,593	-		LRK53_RS04715	0.50	+0.9