Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16770

Experiment: defined media with 20AA_mix

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with 20AA_mix
3,689,413	+				-2.1
3,689,472	+		LRK53_RS16765	0.17	-1.1
3,689,472	+		LRK53_RS16765	0.17	-0.0
3,689,472	+		LRK53_RS16765	0.17	-2.7
3,689,472	+		LRK53_RS16765	0.17	+1.4
3,689,472	+		LRK53_RS16765	0.17	-1.6
3,689,472	+		LRK53_RS16765	0.17	-1.3
3,689,472	+		LRK53_RS16765	0.17	-2.6
3,689,473	-		LRK53_RS16765	0.18	+1.4
3,689,473	-		LRK53_RS16765	0.18	+0.4
3,689,473	-		LRK53_RS16765	0.18	-0.6
3,689,473	-		LRK53_RS16765	0.18	-0.2
3,689,473	-		LRK53_RS16765	0.18	+0.4
3,689,473	-		LRK53_RS16765	0.18	-0.4
3,689,473	-		LRK53_RS16765	0.18	+1.0
3,689,484	+		LRK53_RS16765	0.19	-2.3
3,689,484	+		LRK53_RS16765	0.19	+1.4
3,689,484	+		LRK53_RS16765	0.19	-0.2
3,689,484	+		LRK53_RS16765	0.19	-1.1
3,689,484	+		LRK53_RS16765	0.19	-2.4
3,689,484	+		LRK53_RS16765	0.19	+0.4
3,689,484	+		LRK53_RS16765	0.19	-0.6
3,689,484	+		LRK53_RS16765	0.19	+1.4
3,689,484	+		LRK53_RS16765	0.19	-1.7
3,689,484	+		LRK53_RS16765	0.19	-2.3
3,689,484	+		LRK53_RS16765	0.19	+0.4
3,689,484	+		LRK53_RS16765	0.19	-2.0
3,689,484	+		LRK53_RS16765	0.19	+0.1
3,689,484	+		LRK53_RS16765	0.19	-2.3
3,689,484	+		LRK53_RS16765	0.19	-0.9
3,689,484	+		LRK53_RS16765	0.19	-0.7
3,689,484	+		LRK53_RS16765	0.19	-1.8
3,689,484	+		LRK53_RS16765	0.19	-1.7
3,689,484	+		LRK53_RS16765	0.19	-2.0
3,689,484	+		LRK53_RS16765	0.19	-0.2
3,689,484	+		LRK53_RS16765	0.19	-2.2
3,689,484	+		LRK53_RS16765	0.19	-0.8
3,689,484	+		LRK53_RS16765	0.19	-0.2
3,689,485	-		LRK53_RS16765	0.19	-0.1
3,689,485	-		LRK53_RS16765	0.19	-2.1
3,689,485	-		LRK53_RS16765	0.19	-0.6
3,689,485	-		LRK53_RS16765	0.19	-2.1
3,689,485	-		LRK53_RS16765	0.19	-1.6
3,689,485	-		LRK53_RS16765	0.19	-1.9
3,689,485	-		LRK53_RS16765	0.19	-0.6
3,689,485	-		LRK53_RS16765	0.19	-2.8
3,689,485	-		LRK53_RS16765	0.19	-1.9
3,689,485	-		LRK53_RS16765	0.19	-1.2
3,689,485	-		LRK53_RS16765	0.19	-0.8
3,689,485	-		LRK53_RS16765	0.19	-0.4
3,689,485	-		LRK53_RS16765	0.19	-2.3
3,689,485	-		LRK53_RS16765	0.19	-1.6
3,689,485	-		LRK53_RS16765	0.19	-1.4
3,689,485	-		LRK53_RS16765	0.19	-1.2
3,689,485	-		LRK53_RS16765	0.19	-2.4
3,689,485	-		LRK53_RS16765	0.19	-1.2
3,689,485	-		LRK53_RS16765	0.19	-0.2
3,689,485	-		LRK53_RS16765	0.19	-0.5
3,689,485	-		LRK53_RS16765	0.19	+1.4
3,689,485	-		LRK53_RS16765	0.19	-0.2
3,689,485	-		LRK53_RS16765	0.19	-1.5
3,689,485	-		LRK53_RS16765	0.19	-1.9
3,689,485	-		LRK53_RS16765	0.19	-1.5
3,689,485	-		LRK53_RS16765	0.19	-1.4
3,689,485	-		LRK53_RS16765	0.19	-1.0
3,689,511	+		LRK53_RS16765	0.23	-1.3
3,689,511	+		LRK53_RS16765	0.23	-1.6
3,689,511	+		LRK53_RS16765	0.23	-1.0
3,689,511	+		LRK53_RS16765	0.23	-2.5
3,689,511	+		LRK53_RS16765	0.23	-2.5
3,689,511	+		LRK53_RS16765	0.23	-2.0
3,689,511	+		LRK53_RS16765	0.23	-2.2
3,689,511	+		LRK53_RS16765	0.23	-0.6
3,689,511	+		LRK53_RS16765	0.23	-0.2
3,689,511	+		LRK53_RS16765	0.23	+0.2
3,689,511	+		LRK53_RS16765	0.23	-0.0
3,689,511	+		LRK53_RS16765	0.23	-0.8
3,689,511	+		LRK53_RS16765	0.23	+1.0
3,689,511	+		LRK53_RS16765	0.23	-2.9
3,689,511	+		LRK53_RS16765	0.23	-1.4
3,689,512	-		LRK53_RS16765	0.23	-2.1
3,689,512	-		LRK53_RS16765	0.23	+0.1
3,689,512	-		LRK53_RS16765	0.23	-1.6
3,689,512	-		LRK53_RS16765	0.23	-2.1
3,689,512	-		LRK53_RS16765	0.23	-0.6
3,689,512	-		LRK53_RS16765	0.23	-1.9
3,689,550	+		LRK53_RS16765	0.29	+0.8
3,689,550	+		LRK53_RS16765	0.29	-0.3
3,689,550	+		LRK53_RS16765	0.29	-1.6
3,689,550	+		LRK53_RS16765	0.29	-0.2
3,689,550	+		LRK53_RS16765	0.29	-0.9
3,689,550	+		LRK53_RS16765	0.29	+1.4
3,689,550	+		LRK53_RS16765	0.29	-1.7
3,689,550	+		LRK53_RS16765	0.29	-2.1
3,689,550	+		LRK53_RS16765	0.29	-1.2
3,689,550	+		LRK53_RS16765	0.29	-0.2
3,689,550	+		LRK53_RS16765	0.29	-1.8
3,689,550	+		LRK53_RS16765	0.29	-0.2
3,689,551	-		LRK53_RS16765	0.29	-0.6
3,689,551	-		LRK53_RS16765	0.29	-3.5
3,689,551	-		LRK53_RS16765	0.29	+0.2
3,689,551	-		LRK53_RS16765	0.29	-3.1
3,689,551	-		LRK53_RS16765	0.29	-1.1
3,689,551	-		LRK53_RS16765	0.29	-2.2
3,689,551	-		LRK53_RS16765	0.29	-1.6
3,689,551	-		LRK53_RS16765	0.29	-1.2
3,689,551	-		LRK53_RS16765	0.29	-0.9
3,689,551	-		LRK53_RS16765	0.29	-2.7
3,689,551	-		LRK53_RS16765	0.29	-1.6
3,689,551	-		LRK53_RS16765	0.29	-1.5
3,689,551	-		LRK53_RS16765	0.29	-0.6
3,689,551	-		LRK53_RS16765	0.29	-1.6
3,689,551	-		LRK53_RS16765	0.29	-0.6
3,689,551	-		LRK53_RS16765	0.29	-1.5
3,689,551	-		LRK53_RS16765	0.29	-1.7
3,689,551	-		LRK53_RS16765	0.29	-1.3
3,689,551	-		LRK53_RS16765	0.29	-0.2
3,689,551	-		LRK53_RS16765	0.29	-1.2
3,689,582	+		LRK53_RS16765	0.33	-2.2
3,689,582	+		LRK53_RS16765	0.33	-1.6
3,689,583	-		LRK53_RS16765	0.33	-0.8
3,689,583	-		LRK53_RS16765	0.33	-2.1
3,689,583	-		LRK53_RS16765	0.33	-0.7
3,689,583	-		LRK53_RS16765	0.33	-2.2
3,689,583	-		LRK53_RS16765	0.33	-2.1
3,689,583	-		LRK53_RS16765	0.33	-1.8
3,689,583	-		LRK53_RS16765	0.33	-1.8
3,689,661	+		LRK53_RS16765	0.45	-1.9
3,689,661	+		LRK53_RS16765	0.45	-2.1
3,689,661	+		LRK53_RS16765	0.45	-3.0
3,689,661	+		LRK53_RS16765	0.45	-2.1
3,689,661	+		LRK53_RS16765	0.45	+1.0
3,689,661	+		LRK53_RS16765	0.45	-0.4
3,689,661	+		LRK53_RS16765	0.45	+1.4
3,689,661	+		LRK53_RS16765	0.45	-0.2
3,689,661	+		LRK53_RS16765	0.45	-1.4
3,689,661	+		LRK53_RS16765	0.45	-0.6
3,689,661	+		LRK53_RS16765	0.45	-0.0
3,689,661	+		LRK53_RS16765	0.45	-2.1
3,689,661	+		LRK53_RS16765	0.45	-2.3
3,689,661	+		LRK53_RS16765	0.45	-1.8
3,689,662	-		LRK53_RS16765	0.45	-0.9
3,689,662	-		LRK53_RS16765	0.45	-0.4
3,689,662	-		LRK53_RS16765	0.45	-0.4
3,689,662	-		LRK53_RS16765	0.45	-2.3
3,689,662	-		LRK53_RS16765	0.45	-2.6
3,689,662	-		LRK53_RS16765	0.45	-0.9
3,689,662	-		LRK53_RS16765	0.45	-3.1
3,689,662	-		LRK53_RS16765	0.45	-0.6
3,689,662	-		LRK53_RS16765	0.45	-1.1
3,689,662	-		LRK53_RS16765	0.45	+0.2
3,689,662	-		LRK53_RS16765	0.45	-0.6
3,689,662	-		LRK53_RS16765	0.45	-1.2
3,689,662	-		LRK53_RS16765	0.45	+0.4
3,689,662	-		LRK53_RS16765	0.45	-2.3
3,689,662	-		LRK53_RS16765	0.45	-0.2
3,689,662	-		LRK53_RS16765	0.45	-1.4
3,689,662	-		LRK53_RS16765	0.45	-1.2
3,689,662	-		LRK53_RS16765	0.45	-1.5
3,689,662	-		LRK53_RS16765	0.45	-0.2
3,689,662	-		LRK53_RS16765	0.45	-0.2
3,689,662	-		LRK53_RS16765	0.45	-1.4
3,689,662	-		LRK53_RS16765	0.45	+0.4
3,689,662	-		LRK53_RS16765	0.45	-0.6
3,689,683	-		LRK53_RS16765	0.48	+0.4
3,689,703	+		LRK53_RS16765	0.51	-0.4
3,689,703	+		LRK53_RS16765	0.51	-0.3
3,689,703	+		LRK53_RS16765	0.51	-1.9
3,689,703	+		LRK53_RS16765	0.51	-0.0
3,689,703	+		LRK53_RS16765	0.51	+0.3
3,689,703	+		LRK53_RS16765	0.51	-0.2
3,689,703	+		LRK53_RS16765	0.51	-2.3
3,689,703	+		LRK53_RS16765	0.51	-3.0
3,689,703	+		LRK53_RS16765	0.51	-1.3
3,689,703	+		LRK53_RS16765	0.51	-1.6
3,689,703	+		LRK53_RS16765	0.51	-2.1
3,689,703	+		LRK53_RS16765	0.51	+1.4
3,689,703	+		LRK53_RS16765	0.51	-0.4
3,689,703	+		LRK53_RS16765	0.51	-1.2
3,689,703	+		LRK53_RS16765	0.51	-2.1
3,689,703	+		LRK53_RS16765	0.51	+1.4
3,689,703	+		LRK53_RS16765	0.51	-1.5
3,689,703	+		LRK53_RS16765	0.51	-2.3
3,689,703	+		LRK53_RS16765	0.51	-1.7
3,689,703	+		LRK53_RS16765	0.51	-0.8
3,689,703	+		LRK53_RS16765	0.51	-2.2
3,689,703	+		LRK53_RS16765	0.51	-0.2
3,689,704	-		LRK53_RS16765	0.51	+1.4
3,689,704	-		LRK53_RS16765	0.51	-1.6
3,689,704	-		LRK53_RS16765	0.51	+1.7
3,689,704	-		LRK53_RS16765	0.51	+0.2
3,689,704	-		LRK53_RS16765	0.51	-2.0
3,689,704	-		LRK53_RS16765	0.51	-2.0
3,689,704	-		LRK53_RS16765	0.51	+0.7
3,689,704	-		LRK53_RS16765	0.51	-1.5
3,689,704	-		LRK53_RS16765	0.51	-0.6
3,689,704	-		LRK53_RS16765	0.51	-2.5
3,689,704	-		LRK53_RS16765	0.51	-1.0
3,689,704	-		LRK53_RS16765	0.51	-0.6
3,689,704	-		LRK53_RS16765	0.51	-0.6
3,689,704	-		LRK53_RS16765	0.51	-0.2
3,689,704	-		LRK53_RS16765	0.51	-2.6
3,689,704	-		LRK53_RS16765	0.51	-1.2
3,689,704	-		LRK53_RS16765	0.51	-2.7
3,689,704	-		LRK53_RS16765	0.51	-1.2
3,689,704	-		LRK53_RS16765	0.51	+1.4
3,689,704	-		LRK53_RS16765	0.51	-2.7
3,689,704	-		LRK53_RS16765	0.51	+0.7
3,689,704	-		LRK53_RS16765	0.51	-0.6
3,689,781	+		LRK53_RS16765	0.62	+0.4
3,689,781	+		LRK53_RS16765	0.62	+0.0
3,689,781	+		LRK53_RS16765	0.62	-0.2
3,689,781	+		LRK53_RS16765	0.62	+0.4
3,689,781	+		LRK53_RS16765	0.62	-0.9
3,689,781	+		LRK53_RS16765	0.62	-0.2
3,689,781	+		LRK53_RS16765	0.62	-2.6
3,689,781	+		LRK53_RS16765	0.62	-0.9
3,689,781	+		LRK53_RS16765	0.62	+0.4
3,689,781	+		LRK53_RS16765	0.62	+0.8
3,689,782	-		LRK53_RS16765	0.62	-2.0
3,689,782	-		LRK53_RS16765	0.62	+1.4
3,689,782	-		LRK53_RS16765	0.62	-1.9
3,689,782	-		LRK53_RS16765	0.62	-0.2
3,689,782	-		LRK53_RS16765	0.62	+0.3
3,689,782	-		LRK53_RS16765	0.62	-0.7
3,690,050	+				-2.2
3,690,050	+				-2.5
3,690,050	+				-0.2
3,690,050	+				+0.1
3,690,050	+				-1.5
3,690,050	+				-0.2
3,690,050	+				+1.4
3,690,050	+				-2.3
3,690,051	-				-0.9
3,690,051	-				-0.9
3,690,051	-				-1.9
3,690,051	-				+0.4
3,690,051	-				-0.3
3,690,051	-				-1.4
3,690,098	+				-1.6
3,690,098	+				-1.2
3,690,098	+				-0.2
3,690,098	+				-2.1
3,690,098	+				-1.7
3,690,099	-				-0.2
3,690,099	-				-0.6
3,690,103	+				-0.6
3,690,103	+				-1.2
3,690,103	+				-1.1
3,690,103	+				-0.4
3,690,103	+				+2.4
3,690,103	+				+0.1
3,690,103	+				+1.4
3,690,103	+				-0.0
3,690,103	+				-0.8
3,690,104	-				-0.8
3,690,104	-				-0.6
3,690,104	-				-0.2
3,690,104	-				-0.9
3,690,104	-				-0.9
3,690,104	-				-0.7
3,690,259	+		LRK53_RS16770	0.18	-0.2
3,690,259	+		LRK53_RS16770	0.18	-0.6
3,690,259	+		LRK53_RS16770	0.18	-1.9
3,690,259	+		LRK53_RS16770	0.18	-0.1
3,690,259	+		LRK53_RS16770	0.18	-0.2
3,690,259	+		LRK53_RS16770	0.18	-0.6
3,690,259	+		LRK53_RS16770	0.18	-0.6
3,690,259	+		LRK53_RS16770	0.18	+2.4
3,690,259	+		LRK53_RS16770	0.18	-2.0
3,690,259	+		LRK53_RS16770	0.18	-0.6
3,690,259	+		LRK53_RS16770	0.18	-0.2
3,690,259	+		LRK53_RS16770	0.18	-2.6
3,690,259	+		LRK53_RS16770	0.18	-0.4
3,690,259	+		LRK53_RS16770	0.18	-1.2
3,690,259	+		LRK53_RS16770	0.18	-2.8
3,690,259	+		LRK53_RS16770	0.18	-2.1
3,690,259	+		LRK53_RS16770	0.18	-1.6
3,690,259	+		LRK53_RS16770	0.18	-0.4
3,690,259	+		LRK53_RS16770	0.18	-1.3
3,690,259	+		LRK53_RS16770	0.18	-0.6
3,690,259	+		LRK53_RS16770	0.18	-0.6
3,690,259	+		LRK53_RS16770	0.18	+0.4
3,690,259	+		LRK53_RS16770	0.18	-2.8
3,690,259	+		LRK53_RS16770	0.18	-1.6
3,690,259	+		LRK53_RS16770	0.18	+0.3
3,690,259	+		LRK53_RS16770	0.18	-2.0
3,690,259	+		LRK53_RS16770	0.18	-1.2
3,690,259	+		LRK53_RS16770	0.18	+0.8
3,690,260	-		LRK53_RS16770	0.19	-0.8
3,690,260	-		LRK53_RS16770	0.19	-1.8
3,690,260	-		LRK53_RS16770	0.19	-1.4
3,690,260	-		LRK53_RS16770	0.19	-2.6
3,690,260	-		LRK53_RS16770	0.19	+1.0
3,690,260	-		LRK53_RS16770	0.19	-1.6
3,690,260	-		LRK53_RS16770	0.19	-2.4
3,690,260	-		LRK53_RS16770	0.19	-0.6
3,690,260	-		LRK53_RS16770	0.19	-1.9
3,690,260	-		LRK53_RS16770	0.19	-0.8
3,690,260	-		LRK53_RS16770	0.19	-0.2
3,690,260	-		LRK53_RS16770	0.19	-0.4
3,690,260	-		LRK53_RS16770	0.19	+0.2
3,690,260	-		LRK53_RS16770	0.19	+1.0
3,690,260	-		LRK53_RS16770	0.19	-0.6
3,690,260	-		LRK53_RS16770	0.19	-0.9
3,690,260	-		LRK53_RS16770	0.19	+0.8
3,690,260	-		LRK53_RS16770	0.19	+0.6
3,690,260	-		LRK53_RS16770	0.19	+0.4
3,690,260	-		LRK53_RS16770	0.19	-0.4
3,690,260	-		LRK53_RS16770	0.19	-0.2
3,690,260	-		LRK53_RS16770	0.19	-0.8
3,690,260	-		LRK53_RS16770	0.19	-1.4
3,690,322	+		LRK53_RS16770	0.26	-2.3
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3,690,829	+		LRK53_RS16770	0.85	-2.1
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3,690,880	+				-1.1
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