Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16465

Experiment: defined media with 20AA_mix

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with 20AA_mix
3,625,438	+		LRK53_RS16460	0.26	-1.3
3,625,438	+		LRK53_RS16460	0.26	-0.6
3,625,438	+		LRK53_RS16460	0.26	+0.4
3,625,438	+		LRK53_RS16460	0.26	-1.1
3,625,439	-		LRK53_RS16460	0.26	-0.2
3,625,439	-		LRK53_RS16460	0.26	-1.1
3,625,451	+		LRK53_RS16460	0.27	-0.8
3,625,452	-		LRK53_RS16460	0.27	-1.2
3,625,480	+		LRK53_RS16460	0.30	-1.4
3,625,480	+		LRK53_RS16460	0.30	-0.2
3,625,480	+		LRK53_RS16460	0.30	-2.6
3,625,480	+		LRK53_RS16460	0.30	-0.9
3,625,480	+		LRK53_RS16460	0.30	-0.2
3,625,480	+		LRK53_RS16460	0.30	-0.9
3,625,480	+		LRK53_RS16460	0.30	-0.9
3,625,480	+		LRK53_RS16460	0.30	+0.1
3,625,481	-		LRK53_RS16460	0.30	-1.4
3,625,481	-		LRK53_RS16460	0.30	-0.3
3,625,481	-		LRK53_RS16460	0.30	+0.4
3,625,501	+		LRK53_RS16460	0.32	-0.4
3,625,501	+		LRK53_RS16460	0.32	+1.0
3,625,501	+		LRK53_RS16460	0.32	+0.8
3,625,501	+		LRK53_RS16460	0.32	-1.2
3,625,501	+		LRK53_RS16460	0.32	+0.6
3,625,501	+		LRK53_RS16460	0.32	-0.8
3,625,501	+		LRK53_RS16460	0.32	+0.4
3,625,501	+		LRK53_RS16460	0.32	-2.4
3,625,501	+		LRK53_RS16460	0.32	-1.6
3,625,501	+		LRK53_RS16460	0.32	-0.3
3,625,501	+		LRK53_RS16460	0.32	+2.0
3,625,501	+		LRK53_RS16460	0.32	-0.3
3,625,502	-		LRK53_RS16460	0.32	-0.3
3,625,502	-		LRK53_RS16460	0.32	-0.8
3,625,502	-		LRK53_RS16460	0.32	-1.8
3,625,502	-		LRK53_RS16460	0.32	+1.4
3,625,502	-		LRK53_RS16460	0.32	-0.2
3,625,502	-		LRK53_RS16460	0.32	-3.1
3,625,502	-		LRK53_RS16460	0.32	-0.9
3,625,502	-		LRK53_RS16460	0.32	-2.2
3,625,502	-		LRK53_RS16460	0.32	+0.2
3,625,502	-		LRK53_RS16460	0.32	-1.2
3,625,502	-		LRK53_RS16460	0.32	+0.3
3,625,502	-		LRK53_RS16460	0.32	-0.6
3,625,502	-		LRK53_RS16460	0.32	-0.2
3,625,502	-		LRK53_RS16460	0.32	+1.9
3,625,502	-		LRK53_RS16460	0.32	-0.9
3,625,565	+		LRK53_RS16460	0.38	-0.4
3,625,565	+		LRK53_RS16460	0.38	-0.2
3,625,565	+		LRK53_RS16460	0.38	-1.0
3,625,565	+		LRK53_RS16460	0.38	+1.4
3,625,565	+		LRK53_RS16460	0.38	-0.2
3,625,565	+		LRK53_RS16460	0.38	-0.2
3,625,566	-		LRK53_RS16460	0.38	+2.2
3,625,566	-		LRK53_RS16460	0.38	-0.6
3,625,566	-		LRK53_RS16460	0.38	-0.9
3,625,566	-		LRK53_RS16460	0.38	-0.2
3,625,566	-		LRK53_RS16460	0.38	-1.8
3,625,566	-		LRK53_RS16460	0.38	+1.4
3,625,566	-		LRK53_RS16460	0.38	+0.4
3,625,566	-		LRK53_RS16460	0.38	-0.7
3,625,591	+		LRK53_RS16460	0.40	-1.4
3,625,591	+		LRK53_RS16460	0.40	-0.8
3,625,675	+		LRK53_RS16460	0.48	+3.0
3,625,675	+		LRK53_RS16460	0.48	-2.1
3,625,676	-		LRK53_RS16460	0.48	-0.2
3,625,676	-		LRK53_RS16460	0.48	+0.1
3,625,690	+		LRK53_RS16460	0.49	-1.2
3,625,690	+		LRK53_RS16460	0.49	+1.4
3,625,691	-		LRK53_RS16460	0.49	-1.6
3,625,916	+		LRK53_RS16460	0.70	-1.9
3,625,916	+		LRK53_RS16460	0.70	-1.2
3,625,916	+		LRK53_RS16460	0.70	-0.6
3,625,916	+		LRK53_RS16460	0.70	-0.0
3,625,916	+		LRK53_RS16460	0.70	+1.4
3,625,916	+		LRK53_RS16460	0.70	+0.1
3,625,916	+		LRK53_RS16460	0.70	-0.6
3,625,916	+		LRK53_RS16460	0.70	+0.4
3,625,916	+		LRK53_RS16460	0.70	-2.1
3,625,916	+		LRK53_RS16460	0.70	-0.9
3,625,916	+		LRK53_RS16460	0.70	+1.4
3,625,916	+		LRK53_RS16460	0.70	-0.4
3,625,916	+		LRK53_RS16460	0.70	-1.4
3,625,916	+		LRK53_RS16460	0.70	+0.4
3,625,916	+		LRK53_RS16460	0.70	-0.6
3,625,916	+		LRK53_RS16460	0.70	+2.4
3,625,916	+		LRK53_RS16460	0.70	-0.4
3,625,916	+		LRK53_RS16460	0.70	+0.7
3,625,916	+		LRK53_RS16460	0.70	+0.4
3,625,916	+		LRK53_RS16460	0.70	+1.4
3,625,916	+		LRK53_RS16460	0.70	+1.4
3,625,916	+		LRK53_RS16460	0.70	+2.4
3,625,916	+		LRK53_RS16460	0.70	-1.6
3,625,916	+		LRK53_RS16460	0.70	-0.1
3,625,916	+		LRK53_RS16460	0.70	-0.2
3,625,916	+		LRK53_RS16460	0.70	+0.8
3,625,916	+		LRK53_RS16460	0.70	-1.9
3,625,916	+		LRK53_RS16460	0.70	-1.4
3,625,917	-		LRK53_RS16460	0.70	-1.2
3,625,917	-		LRK53_RS16460	0.70	-0.9
3,625,917	-		LRK53_RS16460	0.70	-0.2
3,625,917	-		LRK53_RS16460	0.70	+0.4
3,625,917	-		LRK53_RS16460	0.70	-1.0
3,625,917	-		LRK53_RS16460	0.70	-0.9
3,625,917	-		LRK53_RS16460	0.70	-1.1
3,625,917	-		LRK53_RS16460	0.70	+1.4
3,625,917	-		LRK53_RS16460	0.70	-1.6
3,625,917	-		LRK53_RS16460	0.70	-0.9
3,625,917	-		LRK53_RS16460	0.70	+0.4
3,625,917	-		LRK53_RS16460	0.70	-0.9
3,625,917	-		LRK53_RS16460	0.70	+0.9
3,625,917	-		LRK53_RS16460	0.70	-0.1
3,625,917	-		LRK53_RS16460	0.70	-0.6
3,625,917	-		LRK53_RS16460	0.70	-0.9
3,625,917	-		LRK53_RS16460	0.70	+0.4
3,625,965	+		LRK53_RS16460	0.74	-0.1
3,625,966	-		LRK53_RS16460	0.74	+2.4
3,625,966	-		LRK53_RS16460	0.74	+0.9
3,625,966	-		LRK53_RS16460	0.74	-0.2
3,626,176	+				-1.1
3,626,177	-				-0.6
3,626,177	-				-0.2
3,626,311	+				+1.1
3,626,311	+				+1.4
3,626,311	+				-1.4
3,626,311	+				-1.2
3,626,311	+				+1.4
3,626,389	-		LRK53_RS16465	0.19	-0.9
3,626,431	+		LRK53_RS16465	0.27	-0.2
3,626,431	+		LRK53_RS16465	0.27	-2.1
3,626,432	-		LRK53_RS16465	0.27	-1.6
3,626,701	+		LRK53_RS16465	0.76	-0.6
3,626,702	-		LRK53_RS16465	0.76	-0.2
3,626,702	-		LRK53_RS16465	0.76	-0.2
3,626,702	-		LRK53_RS16465	0.76	-1.0
3,626,702	-		LRK53_RS16465	0.76	+1.4
3,626,907	-				+0.8
3,626,907	-				+0.8
3,626,907	-				+1.4
3,626,907	-				-0.7
3,626,907	-				-0.6
3,626,907	-				-0.2
3,626,920	+				+0.6
3,626,920	+				-1.2
3,626,920	+				-0.6
3,626,921	-				+1.4
3,626,921	-				-1.9
3,626,921	-				+1.4
3,626,921	-				-1.2
3,626,921	-				-0.4
3,626,962	+				-2.3
3,626,962	+				-1.1
3,626,962	+				-0.8
3,626,962	+				-0.1
3,626,962	+				-0.3
3,626,963	-				-1.5
3,626,963	-				-1.5
3,626,963	-				+2.0
3,626,963	-				-2.1
3,626,963	-				-0.9
3,626,963	-				+0.3
3,626,965	+				+1.4
3,626,966	-				-2.0
3,627,027	+				-2.2
3,627,027	+				-0.9
3,627,027	+				-0.6
3,627,027	+				+0.4
3,627,027	+				-1.2
3,627,028	-				-0.2
3,627,028	-				+0.4
3,627,028	-				-1.1
3,627,028	-				+0.6
3,627,028	-				-1.6
3,627,030	+				-0.6
3,627,030	+				+3.4
3,627,031	-				+0.4
3,627,031	-				-0.6
3,627,031	-				-0.2
3,627,031	-				-0.9
3,627,031	-				-0.2
3,627,031	-				-0.6
3,627,031	-				-0.4
3,627,031	-				-2.4
3,627,031	-				+1.1
3,627,031	-				+0.4
3,627,031	-				-0.2
3,627,031	-				-0.2
3,627,031	-				+0.4
3,627,039	+				+0.0
3,627,040	-				+0.1
3,627,040	-				-1.9
3,627,134	+		LRK53_RS16470	0.12	-1.6
3,627,135	-		LRK53_RS16470	0.12	-1.4
3,627,284	-		LRK53_RS16470	0.25	-0.4
3,627,284	-		LRK53_RS16470	0.25	-0.8
3,627,287	+		LRK53_RS16470	0.25	-0.8
3,627,287	+		LRK53_RS16470	0.25	-1.2
3,627,287	+		LRK53_RS16470	0.25	-2.2
3,627,287	+		LRK53_RS16470	0.25	-0.3
3,627,287	+		LRK53_RS16470	0.25	+1.4
3,627,287	+		LRK53_RS16470	0.25	-1.0
3,627,287	+		LRK53_RS16470	0.25	-0.5
3,627,288	-		LRK53_RS16470	0.25	-0.2
3,627,288	-		LRK53_RS16470	0.25	+0.2
3,627,288	-		LRK53_RS16470	0.25	-0.1
3,627,288	-		LRK53_RS16470	0.25	+0.8
3,627,288	-		LRK53_RS16470	0.25	+0.4
3,627,288	-		LRK53_RS16470	0.25	+1.4
3,627,288	-		LRK53_RS16470	0.25	-1.6
3,627,288	-		LRK53_RS16470	0.25	+0.3
3,627,381	+		LRK53_RS16470	0.33	-2.4
3,627,381	+		LRK53_RS16470	0.33	+1.4
3,627,381	+		LRK53_RS16470	0.33	+1.6
3,627,382	-		LRK53_RS16470	0.33	-0.5
3,627,382	-		LRK53_RS16470	0.33	-0.6
3,627,382	-		LRK53_RS16470	0.33	+0.4
3,627,382	-		LRK53_RS16470	0.33	+2.0
3,627,382	-		LRK53_RS16470	0.33	+0.0
3,627,382	-		LRK53_RS16470	0.33	-1.4
3,627,384	+		LRK53_RS16470	0.34	+1.4
3,627,384	+		LRK53_RS16470	0.34	-0.9
3,627,384	+		LRK53_RS16470	0.34	+1.4
3,627,384	+		LRK53_RS16470	0.34	+1.4
3,627,384	+		LRK53_RS16470	0.34	-1.6
3,627,384	+		LRK53_RS16470	0.34	-0.2
3,627,384	+		LRK53_RS16470	0.34	-0.6
3,627,385	-		LRK53_RS16470	0.34	+0.3
3,627,385	-		LRK53_RS16470	0.34	-2.9
3,627,385	-		LRK53_RS16470	0.34	+1.4
3,627,385	-		LRK53_RS16470	0.34	-0.0
3,627,385	-		LRK53_RS16470	0.34	+2.0
3,627,385	-		LRK53_RS16470	0.34	-0.7
3,627,385	-		LRK53_RS16470	0.34	-1.3
3,627,385	-		LRK53_RS16470	0.34	+0.8
3,627,385	-		LRK53_RS16470	0.34	-0.3
3,627,408	+		LRK53_RS16470	0.36	-2.7
3,627,408	+		LRK53_RS16470	0.36	-0.9
3,627,409	-		LRK53_RS16470	0.36	+2.0
3,627,420	+		LRK53_RS16470	0.37	+0.5
3,627,420	+		LRK53_RS16470	0.37	+1.4
3,627,421	-		LRK53_RS16470	0.37	+0.8
3,627,686	-		LRK53_RS16470	0.60	+0.4
3,627,818	+		LRK53_RS16470	0.71	-0.7
3,627,818	+		LRK53_RS16470	0.71	+0.4
3,627,818	+		LRK53_RS16470	0.71	+1.4
3,627,818	+		LRK53_RS16470	0.71	-1.0
3,627,818	+		LRK53_RS16470	0.71	-1.8
3,627,818	+		LRK53_RS16470	0.71	-0.6
3,627,818	+		LRK53_RS16470	0.71	-2.1
3,627,818	+		LRK53_RS16470	0.71	-0.9
3,627,818	+		LRK53_RS16470	0.71	-1.2
3,627,818	+		LRK53_RS16470	0.71	-0.9
3,627,818	+		LRK53_RS16470	0.71	+0.4
3,627,818	+		LRK53_RS16470	0.71	-1.1
3,627,818	+		LRK53_RS16470	0.71	-2.1
3,627,818	+		LRK53_RS16470	0.71	+0.4
3,627,819	-		LRK53_RS16470	0.71	-1.9
3,627,819	-		LRK53_RS16470	0.71	-1.0
3,627,819	-		LRK53_RS16470	0.71	-0.6
3,627,819	-		LRK53_RS16470	0.71	-0.9
3,627,819	-		LRK53_RS16470	0.71	-0.4
3,627,819	-		LRK53_RS16470	0.71	-0.2
3,627,819	-		LRK53_RS16470	0.71	-1.2
3,627,819	-		LRK53_RS16470	0.71	-0.2
3,627,819	-		LRK53_RS16470	0.71	+0.4
3,627,819	-		LRK53_RS16470	0.71	-0.2
3,627,819	-		LRK53_RS16470	0.71	-1.9
3,627,819	-		LRK53_RS16470	0.71	+0.4
3,627,819	-		LRK53_RS16470	0.71	-1.4
3,627,819	-		LRK53_RS16470	0.71	-0.9
3,627,819	-		LRK53_RS16470	0.71	-1.6
3,627,819	-		LRK53_RS16470	0.71	-0.3
3,627,819	-		LRK53_RS16470	0.71	-0.8
3,627,819	-		LRK53_RS16470	0.71	+0.4
3,627,819	-		LRK53_RS16470	0.71	-0.3
3,627,819	-		LRK53_RS16470	0.71	-0.3
3,627,819	-		LRK53_RS16470	0.71	-0.7
3,627,819	-		LRK53_RS16470	0.71	-1.2
3,627,819	-		LRK53_RS16470	0.71	+0.8
3,627,819	-		LRK53_RS16470	0.71	-0.8
3,627,822	+		LRK53_RS16470	0.71	-1.2
3,627,822	+		LRK53_RS16470	0.71	+1.8
3,627,822	+		LRK53_RS16470	0.71	+1.4
3,627,822	+		LRK53_RS16470	0.71	-1.2
3,627,822	+		LRK53_RS16470	0.71	-1.4
3,627,822	+		LRK53_RS16470	0.71	+1.4
3,627,822	+		LRK53_RS16470	0.71	+1.4
3,627,822	+		LRK53_RS16470	0.71	-0.6
3,627,822	+		LRK53_RS16470	0.71	-0.9
3,627,822	+		LRK53_RS16470	0.71	-2.2
3,627,823	-		LRK53_RS16470	0.71	-0.0
3,627,823	-		LRK53_RS16470	0.71	-1.9
3,627,823	-		LRK53_RS16470	0.71	-1.2
3,627,823	-		LRK53_RS16470	0.71	-1.6
3,627,823	-		LRK53_RS16470	0.71	-1.9
3,627,823	-		LRK53_RS16470	0.71	-0.9
3,627,823	-		LRK53_RS16470	0.71	+2.4
3,627,823	-		LRK53_RS16470	0.71	-1.8
3,627,823	-		LRK53_RS16470	0.71	-1.3