Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13430

Experiment: defined media with 20AA_mix

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with 20AA_mix
2,966,088	+		LRK53_RS13420	0.87	-2.1
2,966,088	+		LRK53_RS13420	0.87	-1.2
2,966,088	+		LRK53_RS13420	0.87	-0.5
2,966,088	+		LRK53_RS13420	0.87	-0.9
2,966,088	+		LRK53_RS13420	0.87	-1.8
2,966,088	+		LRK53_RS13420	0.87	-0.5
2,966,088	+		LRK53_RS13420	0.87	+1.1
2,966,088	+		LRK53_RS13420	0.87	-2.6
2,966,088	+		LRK53_RS13420	0.87	+0.1
2,966,088	+		LRK53_RS13420	0.87	+0.3
2,966,088	+		LRK53_RS13420	0.87	-1.9
2,966,088	+		LRK53_RS13420	0.87	+0.1
2,966,088	+		LRK53_RS13420	0.87	-1.6
2,966,089	-		LRK53_RS13420	0.87	-0.5
2,966,089	-		LRK53_RS13420	0.87	+1.4
2,966,089	-		LRK53_RS13420	0.87	-1.2
2,966,089	-		LRK53_RS13420	0.87	-0.9
2,966,089	-		LRK53_RS13420	0.87	-1.2
2,966,089	-		LRK53_RS13420	0.87	-0.9
2,966,089	-		LRK53_RS13420	0.87	+0.1
2,966,089	-		LRK53_RS13420	0.87	-0.5
2,966,089	-		LRK53_RS13420	0.87	-0.9
2,966,089	-		LRK53_RS13420	0.87	-0.4
2,966,427	+				-1.1
2,966,427	+				-0.5
2,966,427	+				-0.1
2,966,427	+				-0.5
2,966,427	+				+0.1
2,966,427	+				-1.7
2,966,427	+				+0.9
2,966,427	+				+1.7
2,966,427	+				-0.1
2,966,427	+				-1.8
2,966,427	+				+0.1
2,966,428	-				-0.3
2,966,428	-				-0.6
2,966,428	-				-0.7
2,966,428	-				-1.4
2,966,428	-				-0.2
2,966,428	-				-0.8
2,966,428	-				-1.8
2,966,428	-				-1.7
2,966,428	-				-1.3
2,966,428	-				+0.1
2,966,428	-				+1.1
2,966,428	-				-0.7
2,966,428	-				+0.1
2,966,428	-				-0.7
2,966,428	-				-0.9
2,966,428	-				-0.5
2,966,428	-				-1.2
2,966,428	-				-0.4
2,966,428	-				+0.1
2,966,428	-				-0.6
2,966,428	-				+0.1
2,966,594	+		LRK53_RS13425	0.30	-0.7
2,966,594	+		LRK53_RS13425	0.30	-0.5
2,966,594	+		LRK53_RS13425	0.30	+0.9
2,966,594	+		LRK53_RS13425	0.30	-0.8
2,966,594	+		LRK53_RS13425	0.30	-0.1
2,966,594	+		LRK53_RS13425	0.30	-0.5
2,966,594	+		LRK53_RS13425	0.30	+0.1
2,966,594	+		LRK53_RS13425	0.30	-0.9
2,966,595	-		LRK53_RS13425	0.30	-0.2
2,966,595	-		LRK53_RS13425	0.30	+1.1
2,966,595	-		LRK53_RS13425	0.30	+1.1
2,966,595	-		LRK53_RS13425	0.30	+0.8
2,966,595	-		LRK53_RS13425	0.30	-2.1
2,966,603	+		LRK53_RS13425	0.32	+0.5
2,966,603	+		LRK53_RS13425	0.32	-0.9
2,966,603	+		LRK53_RS13425	0.32	+0.0
2,966,604	-		LRK53_RS13425	0.32	-0.7
2,966,604	-		LRK53_RS13425	0.32	+0.3
2,966,604	-		LRK53_RS13425	0.32	+0.1
2,966,604	-		LRK53_RS13425	0.32	-1.1
2,966,699	+		LRK53_RS13425	0.53	-0.4
2,966,699	+		LRK53_RS13425	0.53	-0.5
2,966,699	+		LRK53_RS13425	0.53	-2.4
2,966,700	-		LRK53_RS13425	0.53	+1.1
2,966,819	+		LRK53_RS13425	0.79	-1.2
2,966,819	+		LRK53_RS13425	0.79	-1.9
2,966,819	+		LRK53_RS13425	0.79	+1.1
2,966,819	+		LRK53_RS13425	0.79	-0.7
2,966,819	+		LRK53_RS13425	0.79	-1.5
2,966,819	+		LRK53_RS13425	0.79	-1.6
2,966,820	-		LRK53_RS13425	0.80	-0.5
2,966,820	-		LRK53_RS13425	0.80	-1.1
2,966,820	-		LRK53_RS13425	0.80	+0.5
2,966,820	-		LRK53_RS13425	0.80	+1.1
2,966,820	-		LRK53_RS13425	0.80	-0.6
2,966,820	-		LRK53_RS13425	0.80	-1.1
2,966,997	+				+0.5
2,966,998	-				+0.1
2,967,041	+				-0.5
2,967,041	+				-0.9
2,967,041	+				-0.5
2,967,159	+				-1.2
2,967,159	+				-1.5
2,967,160	-				+2.1
2,967,202	+				-1.7
2,967,203	-				+0.1
2,967,203	-				+1.1
2,967,203	-				+1.1
2,967,238	+		LRK53_RS13430	0.11	-1.4
2,967,239	-		LRK53_RS13430	0.11	-1.7
2,967,239	-		LRK53_RS13430	0.11	-0.8
2,967,239	-		LRK53_RS13430	0.11	-0.5
2,967,525	+		LRK53_RS13430	0.30	+0.2
2,967,545	-		LRK53_RS13430	0.32	-1.2
2,967,647	-		LRK53_RS13430	0.39	+1.1
2,967,647	-		LRK53_RS13430	0.39	+0.1
2,967,679	+		LRK53_RS13430	0.41	-1.8
2,967,679	+		LRK53_RS13430	0.41	+1.1
2,967,679	+		LRK53_RS13430	0.41	-0.9
2,967,679	+		LRK53_RS13430	0.41	-1.9
2,967,680	-		LRK53_RS13430	0.41	-0.9
2,967,680	-		LRK53_RS13430	0.41	-1.1
2,967,680	-		LRK53_RS13430	0.41	-0.9
2,967,919	+		LRK53_RS13430	0.57	-2.5
2,967,919	+		LRK53_RS13430	0.57	+0.1
2,967,919	+		LRK53_RS13430	0.57	-0.9
2,967,919	+		LRK53_RS13430	0.57	-0.5
2,967,919	+		LRK53_RS13430	0.57	+0.1
2,967,919	+		LRK53_RS13430	0.57	+1.1
2,967,919	+		LRK53_RS13430	0.57	-1.0
2,967,919	+		LRK53_RS13430	0.57	-0.1
2,967,919	+		LRK53_RS13430	0.57	-0.9
2,967,919	+		LRK53_RS13430	0.57	-1.6
2,967,919	+		LRK53_RS13430	0.57	+1.1
2,967,919	+		LRK53_RS13430	0.57	-0.4
2,967,920	-		LRK53_RS13430	0.57	-0.9
2,967,920	-		LRK53_RS13430	0.57	-2.2
2,967,920	-		LRK53_RS13430	0.57	-0.2
2,967,920	-		LRK53_RS13430	0.57	-2.5
2,967,920	-		LRK53_RS13430	0.57	+1.1
2,967,920	-		LRK53_RS13430	0.57	+0.5
2,967,920	-		LRK53_RS13430	0.57	+0.5
2,967,920	-		LRK53_RS13430	0.57	-0.5
2,967,920	-		LRK53_RS13430	0.57	-1.2
2,967,920	-		LRK53_RS13430	0.57	+0.1
2,967,920	-		LRK53_RS13430	0.57	-0.9
2,967,920	-		LRK53_RS13430	0.57	-2.8
2,967,976	+		LRK53_RS13430	0.61	+0.1
2,967,976	+		LRK53_RS13430	0.61	+0.0
2,967,976	+		LRK53_RS13430	0.61	-1.5
2,967,976	+		LRK53_RS13430	0.61	-1.2
2,967,977	-		LRK53_RS13430	0.61	-2.2
2,967,977	-		LRK53_RS13430	0.61	+1.1
2,968,015	+		LRK53_RS13430	0.64	-0.7
2,968,015	+		LRK53_RS13430	0.64	+0.2
2,968,015	+		LRK53_RS13430	0.64	-1.2
2,968,015	+		LRK53_RS13430	0.64	-0.7
2,968,015	+		LRK53_RS13430	0.64	-0.5
2,968,015	+		LRK53_RS13430	0.64	-2.1
2,968,016	-		LRK53_RS13430	0.64	+0.7
2,968,016	-		LRK53_RS13430	0.64	+0.3
2,968,016	-		LRK53_RS13430	0.64	+0.5
2,968,033	+		LRK53_RS13430	0.65	-0.5
2,968,033	+		LRK53_RS13430	0.65	-1.5
2,968,034	-		LRK53_RS13430	0.65	-0.9
2,968,138	+		LRK53_RS13430	0.72	-1.2
2,968,275	+		LRK53_RS13430	0.82	-0.9
2,968,275	+		LRK53_RS13430	0.82	-0.4
2,968,499	-				+0.1
2,968,511	-				+0.1
2,968,540	+				-1.7
2,968,540	+				-0.7
2,968,540	+				+1.7
2,968,540	+				-1.5
2,968,540	+				-0.9
2,968,540	+				-0.8
2,968,540	+				-0.2
2,968,540	+				+0.1
2,968,540	+				-0.5
2,968,540	+				-1.3
2,968,541	-				-3.2
2,968,541	-				-1.2
2,968,541	-				-1.7
2,968,541	-				-0.6
2,968,541	-				+1.1
2,968,541	-				-0.5
2,968,544	+				-1.5
2,968,545	-				-0.9
2,968,786	+		LRK53_RS13435	0.30	+0.1
2,968,786	+		LRK53_RS13435	0.30	+1.1
2,968,786	+		LRK53_RS13435	0.30	-0.4
2,968,786	+		LRK53_RS13435	0.30	+0.5
2,968,903	+		LRK53_RS13435	0.45	-1.0
2,969,011	+		LRK53_RS13435	0.59	-0.9
2,969,011	+		LRK53_RS13435	0.59	+0.1
2,969,011	+		LRK53_RS13435	0.59	-0.2
2,969,011	+		LRK53_RS13435	0.59	+1.1
2,969,011	+		LRK53_RS13435	0.59	-0.9
2,969,011	+		LRK53_RS13435	0.59	-0.9
2,969,011	+		LRK53_RS13435	0.59	-0.5
2,969,011	+		LRK53_RS13435	0.59	+0.6
2,969,011	+		LRK53_RS13435	0.59	-0.6
2,969,012	-		LRK53_RS13435	0.59	-0.9
2,969,012	-		LRK53_RS13435	0.59	-1.9
2,969,012	-		LRK53_RS13435	0.59	-0.4
2,969,012	-		LRK53_RS13435	0.59	-0.7
2,969,012	-		LRK53_RS13435	0.59	-1.0
2,969,012	-		LRK53_RS13435	0.59	-0.5
2,969,012	-		LRK53_RS13435	0.59	+0.5
2,969,012	-		LRK53_RS13435	0.59	-1.6
2,969,198	+		LRK53_RS13435	0.84	+0.5
2,969,199	-		LRK53_RS13435	0.84	+0.1
2,969,209	+		LRK53_RS13435	0.85	-0.9
2,969,209	+		LRK53_RS13435	0.85	-1.1
2,969,209	+		LRK53_RS13435	0.85	-0.5
2,969,210	-		LRK53_RS13435	0.86	-1.9
2,969,210	-		LRK53_RS13435	0.86	-0.5
2,969,210	-		LRK53_RS13435	0.86	+0.7
2,969,210	-		LRK53_RS13435	0.86	-0.7
2,969,210	-		LRK53_RS13435	0.86	-1.2
2,969,328	+				-0.1
2,969,328	+				-1.3
2,969,328	+				-0.1
2,969,328	+				-0.5
2,969,328	+				-0.7
2,969,328	+				-0.1
2,969,329	-				+0.1
2,969,329	-				-3.0
2,969,329	-				+1.1
2,969,487	+				-0.5
2,969,487	+				+0.7
2,969,487	+				-1.5
2,969,487	+				-0.5
2,969,487	+				-0.7
2,969,487	+				+0.1
2,969,487	+				-1.1
2,969,487	+				-1.4
2,969,487	+				+1.1
2,969,487	+				+1.1
2,969,487	+				-2.6
2,969,487	+				-1.2
2,969,487	+				-0.5
2,969,488	-				-0.9
2,969,488	-				-1.2
2,969,488	-				-0.9
2,969,488	-				-0.6
2,969,488	-				+0.1
2,969,488	-				-0.2
2,969,488	-				-2.1
2,969,488	-				+1.1
2,969,488	-				-1.2
2,969,488	-				+0.4
2,969,488	-				-0.5
2,969,488	-				-0.9
2,969,488	-				-1.6
2,969,535	+		LRK53_RS13440	0.12	+1.7
2,969,535	+		LRK53_RS13440	0.12	+1.1
2,969,535	+		LRK53_RS13440	0.12	-1.4
2,969,535	+		LRK53_RS13440	0.12	-0.2
2,969,535	+		LRK53_RS13440	0.12	-1.4
2,969,535	+		LRK53_RS13440	0.12	-0.7
2,969,535	+		LRK53_RS13440	0.12	+0.3
2,969,535	+		LRK53_RS13440	0.12	+0.1
2,969,535	+		LRK53_RS13440	0.12	-2.1
2,969,535	+		LRK53_RS13440	0.12	-1.2
2,969,535	+		LRK53_RS13440	0.12	-0.5
2,969,535	+		LRK53_RS13440	0.12	-0.5
2,969,536	-		LRK53_RS13440	0.13	-0.9
2,969,536	-		LRK53_RS13440	0.13	+0.8
2,969,536	-		LRK53_RS13440	0.13	-2.0
2,969,536	-		LRK53_RS13440	0.13	-0.5
2,969,536	-		LRK53_RS13440	0.13	-1.3
2,969,536	-		LRK53_RS13440	0.13	-1.4
2,969,536	-		LRK53_RS13440	0.13	-3.5