Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12680

Experiment: defined media with 20AA_mix

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with 20AA_mix
2,805,167	+		LRK53_RS12675	0.43	-1.5
2,805,167	+		LRK53_RS12675	0.43	-0.5
2,805,167	+		LRK53_RS12675	0.43	-0.5
2,805,167	+		LRK53_RS12675	0.43	+1.1
2,805,168	-		LRK53_RS12675	0.43	-1.9
2,805,168	-		LRK53_RS12675	0.43	-0.7
2,805,421	+		LRK53_RS12675	0.60	-0.5
2,805,422	-		LRK53_RS12675	0.60	-0.4
2,805,422	-		LRK53_RS12675	0.60	-1.7
2,805,422	-		LRK53_RS12675	0.60	+0.1
2,805,565	+		LRK53_RS12675	0.69	+0.7
2,805,565	+		LRK53_RS12675	0.69	+0.4
2,805,565	+		LRK53_RS12675	0.69	+0.1
2,805,565	+		LRK53_RS12675	0.69	-0.5
2,805,565	+		LRK53_RS12675	0.69	-0.5
2,805,566	-		LRK53_RS12675	0.69	+1.1
2,805,566	-		LRK53_RS12675	0.69	+0.1
2,805,566	-		LRK53_RS12675	0.69	-2.2
2,805,673	+		LRK53_RS12675	0.76	+0.1
2,805,673	+		LRK53_RS12675	0.76	+1.1
2,805,673	+		LRK53_RS12675	0.76	+0.1
2,805,673	+		LRK53_RS12675	0.76	+2.1
2,805,673	+		LRK53_RS12675	0.76	+0.1
2,805,674	-		LRK53_RS12675	0.76	-0.5
2,805,674	-		LRK53_RS12675	0.76	+1.1
2,805,674	-		LRK53_RS12675	0.76	+2.1
2,805,674	-		LRK53_RS12675	0.76	+0.1
2,805,674	-		LRK53_RS12675	0.76	+0.1
2,805,820	+		LRK53_RS12675	0.85	-1.0
2,805,820	+		LRK53_RS12675	0.85	+0.1
2,805,821	-		LRK53_RS12675	0.85	+1.1
2,805,821	-		LRK53_RS12675	0.85	-0.9
2,805,821	-		LRK53_RS12675	0.85	-0.5
2,806,125	+				-2.8
2,806,125	+				-1.5
2,806,125	+				-4.7
2,806,125	+				-1.1
2,806,125	+				-1.6
2,806,125	+				-1.1
2,806,125	+				-1.0
2,806,125	+				-3.9
2,806,125	+				-1.2
2,806,126	-				-1.7
2,806,126	-				-1.7
2,806,126	-				-2.1
2,806,126	-				-2.8
2,806,135	+				-1.4
2,806,135	+				-3.3
2,806,178	+				+0.1
2,806,178	+				-1.9
2,806,178	+				-0.5
2,806,178	+				-1.5
2,806,178	+				-1.5
2,806,178	+				-1.9
2,806,179	-				+1.1
2,806,179	-				+1.5
2,806,179	-				-1.6
2,806,179	-				-0.2
2,806,179	-				-0.7
2,806,179	-				-0.7
2,806,196	+				-0.9
2,806,196	+				+0.1
2,806,196	+				-2.2
2,806,196	+				+0.2
2,806,196	+				-2.1
2,806,197	-				-2.4
2,806,197	-				-0.5
2,806,217	+		LRK53_RS12680	0.14	+0.1
2,806,217	+		LRK53_RS12680	0.14	-3.4
2,806,217	+		LRK53_RS12680	0.14	+0.1
2,806,217	+		LRK53_RS12680	0.14	-1.4
2,806,217	+		LRK53_RS12680	0.14	-3.4
2,806,217	+		LRK53_RS12680	0.14	-0.5
2,806,217	+		LRK53_RS12680	0.14	-0.5
2,806,217	+		LRK53_RS12680	0.14	-2.8
2,806,217	+		LRK53_RS12680	0.14	-1.1
2,806,217	+		LRK53_RS12680	0.14	-0.7
2,806,217	+		LRK53_RS12680	0.14	-1.2
2,806,217	+		LRK53_RS12680	0.14	-1.5
2,806,217	+		LRK53_RS12680	0.14	-0.9
2,806,217	+		LRK53_RS12680	0.14	-1.7
2,806,217	+		LRK53_RS12680	0.14	-0.5
2,806,217	+		LRK53_RS12680	0.14	-0.9
2,806,217	+		LRK53_RS12680	0.14	-4.2
2,806,217	+		LRK53_RS12680	0.14	+0.1
2,806,217	+		LRK53_RS12680	0.14	-1.9
2,806,217	+		LRK53_RS12680	0.14	-2.3
2,806,217	+		LRK53_RS12680	0.14	-1.2
2,806,217	+		LRK53_RS12680	0.14	-1.7
2,806,217	+		LRK53_RS12680	0.14	+0.1
2,806,217	+		LRK53_RS12680	0.14	-1.2
2,806,217	+		LRK53_RS12680	0.14	-2.2
2,806,217	+		LRK53_RS12680	0.14	+0.1
2,806,217	+		LRK53_RS12680	0.14	-1.5
2,806,217	+		LRK53_RS12680	0.14	-1.4
2,806,217	+		LRK53_RS12680	0.14	-0.5
2,806,217	+		LRK53_RS12680	0.14	-2.7
2,806,217	+		LRK53_RS12680	0.14	-1.4
2,806,217	+		LRK53_RS12680	0.14	-2.1
2,806,218	-		LRK53_RS12680	0.14	-1.9
2,806,218	-		LRK53_RS12680	0.14	-1.2
2,806,218	-		LRK53_RS12680	0.14	-0.5
2,806,218	-		LRK53_RS12680	0.14	-0.7
2,806,218	-		LRK53_RS12680	0.14	-0.3
2,806,218	-		LRK53_RS12680	0.14	-1.7
2,806,218	-		LRK53_RS12680	0.14	+0.1
2,806,218	-		LRK53_RS12680	0.14	-1.4
2,806,218	-		LRK53_RS12680	0.14	-1.8
2,806,218	-		LRK53_RS12680	0.14	-1.9
2,806,218	-		LRK53_RS12680	0.14	-1.4
2,806,218	-		LRK53_RS12680	0.14	+0.1
2,806,218	-		LRK53_RS12680	0.14	-0.9
2,806,218	-		LRK53_RS12680	0.14	-0.3
2,806,218	-		LRK53_RS12680	0.14	-2.0
2,806,218	-		LRK53_RS12680	0.14	-0.5
2,806,218	-		LRK53_RS12680	0.14	-2.9
2,806,218	-		LRK53_RS12680	0.14	-2.7
2,806,218	-		LRK53_RS12680	0.14	-2.3
2,806,218	-		LRK53_RS12680	0.14	-0.8
2,806,218	-		LRK53_RS12680	0.14	-1.7
2,806,218	-		LRK53_RS12680	0.14	+0.1
2,806,218	-		LRK53_RS12680	0.14	-3.2
2,806,218	-		LRK53_RS12680	0.14	-1.5
2,806,218	-		LRK53_RS12680	0.14	-2.6
2,806,218	-		LRK53_RS12680	0.14	-0.7
2,806,218	-		LRK53_RS12680	0.14	+0.1
2,806,218	-		LRK53_RS12680	0.14	-0.0
2,806,218	-		LRK53_RS12680	0.14	-0.5
2,806,218	-		LRK53_RS12680	0.14	+0.5
2,806,218	-		LRK53_RS12680	0.14	-1.2
2,806,394	+		LRK53_RS12680	0.49	-0.9
2,806,394	+		LRK53_RS12680	0.49	-1.9
2,806,394	+		LRK53_RS12680	0.49	+0.1
2,806,394	+		LRK53_RS12680	0.49	+0.1
2,806,394	+		LRK53_RS12680	0.49	-0.9
2,806,395	-		LRK53_RS12680	0.50	-1.5
2,806,395	-		LRK53_RS12680	0.50	-0.9
2,806,395	-		LRK53_RS12680	0.50	-0.1
2,806,395	-		LRK53_RS12680	0.50	-1.0
2,806,395	-		LRK53_RS12680	0.50	-0.5
2,806,395	-		LRK53_RS12680	0.50	-2.3
2,806,395	-		LRK53_RS12680	0.50	-0.5
2,806,427	+		LRK53_RS12680	0.56	-0.7
2,806,428	-		LRK53_RS12680	0.56	-2.0
2,807,231	+		LRK53_RS12685	0.62	+0.1
2,807,231	+		LRK53_RS12685	0.62	+0.2
2,807,231	+		LRK53_RS12685	0.62	-1.0
2,807,231	+		LRK53_RS12685	0.62	+1.1
2,807,231	+		LRK53_RS12685	0.62	+0.1
2,807,232	-		LRK53_RS12685	0.62	-1.1
2,807,232	-		LRK53_RS12685	0.62	+1.1
2,807,232	-		LRK53_RS12685	0.62	+0.1
2,807,232	-		LRK53_RS12685	0.62	+1.1
2,807,232	-		LRK53_RS12685	0.62	+0.1
2,807,253	+		LRK53_RS12685	0.65	-0.2
2,807,253	+		LRK53_RS12685	0.65	-0.9
2,807,253	+		LRK53_RS12685	0.65	-1.5
2,807,253	+		LRK53_RS12685	0.65	+1.1
2,807,253	+		LRK53_RS12685	0.65	+0.1
2,807,253	+		LRK53_RS12685	0.65	+1.4
2,807,253	+		LRK53_RS12685	0.65	-1.9
2,807,254	-		LRK53_RS12685	0.65	-2.2
2,807,254	-		LRK53_RS12685	0.65	+1.5
2,807,254	-		LRK53_RS12685	0.65	-0.9
2,807,465	+				+0.1
2,807,465	+				-1.2
2,807,465	+				+1.1
2,807,466	-				-1.2
2,807,466	-				-0.8
2,807,466	-				-1.6
2,807,501	+				-2.2
2,807,501	+				-1.2
2,807,502	-				+1.1
2,807,502	-				+1.1
2,807,502	-				+1.1
2,807,640	+				-0.5
2,807,640	+				+0.0
2,807,641	-				-0.9