Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12010

Experiment: defined media with 20AA_mix

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with 20AA_mix
2,676,743	+		LRK53_RS12005	0.20	+1.1
2,676,744	-		LRK53_RS12005	0.20	+0.1
2,676,744	-		LRK53_RS12005	0.20	+1.1
2,676,999	-		LRK53_RS12005	0.62	+1.1
2,676,999	-		LRK53_RS12005	0.62	-0.5
2,677,119	+		LRK53_RS12005	0.81	+0.1
2,677,120	-		LRK53_RS12005	0.81	+1.1
2,677,128	-		LRK53_RS12005	0.83	+1.1
2,677,384	+				+0.1
2,677,385	-				+0.5
2,677,500	+				-0.9
2,677,500	+				-0.5
2,677,500	+				-0.8
2,677,500	+				-0.3
2,677,500	+				+0.5
2,677,501	-				-0.2
2,677,705	-		LRK53_RS12010	0.12	-0.9
2,677,904	+		LRK53_RS12010	0.19	-1.3
2,677,905	-		LRK53_RS12010	0.19	-2.1
2,677,905	-		LRK53_RS12010	0.19	+0.5
2,677,905	-		LRK53_RS12010	0.19	-0.7
2,677,905	-		LRK53_RS12010	0.19	-1.1
2,677,905	-		LRK53_RS12010	0.19	-0.6
2,677,905	-		LRK53_RS12010	0.19	+1.1
2,678,145	+		LRK53_RS12010	0.29	-1.1
2,678,145	+		LRK53_RS12010	0.29	+0.1
2,678,145	+		LRK53_RS12010	0.29	-1.7
2,678,146	-		LRK53_RS12010	0.29	-2.2
2,678,220	+		LRK53_RS12010	0.32	-1.9
2,678,220	+		LRK53_RS12010	0.32	+0.3
2,678,220	+		LRK53_RS12010	0.32	+0.9
2,678,221	-		LRK53_RS12010	0.32	+0.1
2,678,221	-		LRK53_RS12010	0.32	+1.6
2,678,221	-		LRK53_RS12010	0.32	+0.3
2,678,221	-		LRK53_RS12010	0.32	-0.9
2,678,238	+		LRK53_RS12010	0.32	-0.4
2,678,238	+		LRK53_RS12010	0.32	-1.7
2,678,238	+		LRK53_RS12010	0.32	-1.3
2,678,238	+		LRK53_RS12010	0.32	-1.9
2,678,251	+		LRK53_RS12010	0.33	-0.5
2,678,251	+		LRK53_RS12010	0.33	-0.5
2,678,251	+		LRK53_RS12010	0.33	+1.1
2,678,251	+		LRK53_RS12010	0.33	-1.5
2,678,251	+		LRK53_RS12010	0.33	+1.1
2,678,251	+		LRK53_RS12010	0.33	+0.1
2,678,252	-		LRK53_RS12010	0.33	+2.1
2,678,252	-		LRK53_RS12010	0.33	+0.1
2,678,252	-		LRK53_RS12010	0.33	-0.9
2,678,252	-		LRK53_RS12010	0.33	-1.3
2,678,252	-		LRK53_RS12010	0.33	+0.8
2,678,252	-		LRK53_RS12010	0.33	-0.5
2,678,277	+		LRK53_RS12010	0.34	+1.1
2,678,277	+		LRK53_RS12010	0.34	-0.6
2,678,277	+		LRK53_RS12010	0.34	+1.1
2,678,277	+		LRK53_RS12010	0.34	-1.6
2,678,277	+		LRK53_RS12010	0.34	+1.1
2,678,278	-		LRK53_RS12010	0.34	-0.3
2,678,278	-		LRK53_RS12010	0.34	-0.9
2,678,278	-		LRK53_RS12010	0.34	-1.3
2,678,278	-		LRK53_RS12010	0.34	-1.1
2,678,278	-		LRK53_RS12010	0.34	+0.1
2,678,278	-		LRK53_RS12010	0.34	+2.1
2,678,278	-		LRK53_RS12010	0.34	-0.5
2,678,278	-		LRK53_RS12010	0.34	-1.0
2,678,278	-		LRK53_RS12010	0.34	+0.5
2,678,278	-		LRK53_RS12010	0.34	-0.9
2,678,278	-		LRK53_RS12010	0.34	+0.1
2,678,427	-		LRK53_RS12010	0.40	-1.4
2,678,435	+		LRK53_RS12010	0.40	-1.5
2,678,435	+		LRK53_RS12010	0.40	-1.5
2,678,435	+		LRK53_RS12010	0.40	-0.5
2,678,435	+		LRK53_RS12010	0.40	-1.3
2,678,435	+		LRK53_RS12010	0.40	-1.3
2,678,435	+		LRK53_RS12010	0.40	-1.3
2,678,435	+		LRK53_RS12010	0.40	-0.8
2,678,435	+		LRK53_RS12010	0.40	+1.1
2,678,435	+		LRK53_RS12010	0.40	-0.8
2,678,435	+		LRK53_RS12010	0.40	+1.1
2,678,435	+		LRK53_RS12010	0.40	+0.5
2,678,436	-		LRK53_RS12010	0.40	-1.0
2,678,436	-		LRK53_RS12010	0.40	-2.5
2,678,436	-		LRK53_RS12010	0.40	-0.9
2,678,436	-		LRK53_RS12010	0.40	+0.1
2,678,436	-		LRK53_RS12010	0.40	-0.6
2,678,436	-		LRK53_RS12010	0.40	-1.8
2,678,436	-		LRK53_RS12010	0.40	+1.1
2,678,436	-		LRK53_RS12010	0.40	+1.6
2,678,436	-		LRK53_RS12010	0.40	-0.5
2,678,436	-		LRK53_RS12010	0.40	-1.5
2,678,436	-		LRK53_RS12010	0.40	-0.2
2,678,436	-		LRK53_RS12010	0.40	-0.5
2,678,436	-		LRK53_RS12010	0.40	+1.4
2,678,436	-		LRK53_RS12010	0.40	+0.5
2,678,436	-		LRK53_RS12010	0.40	-0.5
2,678,491	-		LRK53_RS12010	0.42	+0.1
2,678,577	+		LRK53_RS12010	0.46	-0.9
2,678,577	+		LRK53_RS12010	0.46	-0.9
2,678,577	+		LRK53_RS12010	0.46	-0.5
2,678,577	+		LRK53_RS12010	0.46	+1.1
2,678,577	+		LRK53_RS12010	0.46	-0.6
2,678,577	+		LRK53_RS12010	0.46	+0.1
2,678,577	+		LRK53_RS12010	0.46	+1.1
2,678,578	-		LRK53_RS12010	0.46	+0.5
2,678,578	-		LRK53_RS12010	0.46	-1.4
2,678,578	-		LRK53_RS12010	0.46	-1.5
2,678,578	-		LRK53_RS12010	0.46	-0.2
2,678,578	-		LRK53_RS12010	0.46	-1.2
2,678,578	-		LRK53_RS12010	0.46	+0.1
2,678,578	-		LRK53_RS12010	0.46	+0.1
2,678,578	-		LRK53_RS12010	0.46	-1.3
2,678,578	-		LRK53_RS12010	0.46	-0.6
2,678,578	-		LRK53_RS12010	0.46	-1.5
2,678,578	-		LRK53_RS12010	0.46	+2.1
2,678,578	-		LRK53_RS12010	0.46	+0.1
2,678,578	-		LRK53_RS12010	0.46	-0.9
2,678,578	-		LRK53_RS12010	0.46	-1.3
2,678,578	-		LRK53_RS12010	0.46	-1.2
2,678,578	-		LRK53_RS12010	0.46	-0.5
2,678,578	-		LRK53_RS12010	0.46	+0.6
2,678,866	+		LRK53_RS12010	0.57	-1.3
2,678,866	+		LRK53_RS12010	0.57	-0.5
2,678,866	+		LRK53_RS12010	0.57	-1.4
2,678,867	-		LRK53_RS12010	0.57	+0.1
2,678,867	-		LRK53_RS12010	0.57	-1.3
2,678,867	-		LRK53_RS12010	0.57	-1.3
2,678,880	+		LRK53_RS12010	0.58	+2.1
2,678,880	+		LRK53_RS12010	0.58	-0.5
2,678,881	-		LRK53_RS12010	0.58	-1.3
2,678,881	-		LRK53_RS12010	0.58	-1.3
2,678,964	+		LRK53_RS12010	0.61	-1.0
2,679,105	+		LRK53_RS12010	0.66	-2.0
2,679,105	+		LRK53_RS12010	0.66	-0.9
2,679,105	+		LRK53_RS12010	0.66	-0.9
2,679,106	-		LRK53_RS12010	0.66	-1.8
2,679,106	-		LRK53_RS12010	0.66	-0.5
2,679,106	-		LRK53_RS12010	0.66	+0.5
2,679,524	+		LRK53_RS12010	0.83	-0.1
2,679,524	+		LRK53_RS12010	0.83	-0.8
2,679,524	+		LRK53_RS12010	0.83	-1.5
2,679,524	+		LRK53_RS12010	0.83	-0.9
2,679,524	+		LRK53_RS12010	0.83	-0.5
2,679,525	-		LRK53_RS12010	0.83	-1.5
2,679,525	-		LRK53_RS12010	0.83	+0.1
2,679,525	-		LRK53_RS12010	0.83	-1.1
2,679,525	-		LRK53_RS12010	0.83	-2.4
2,679,525	-		LRK53_RS12010	0.83	-1.0
2,679,525	-		LRK53_RS12010	0.83	+0.3
2,679,525	-		LRK53_RS12010	0.83	-1.8
2,679,525	-		LRK53_RS12010	0.83	+0.1
2,679,528	+		LRK53_RS12010	0.83	+0.1
2,679,528	+		LRK53_RS12010	0.83	+0.6
2,679,529	-		LRK53_RS12010	0.83	-0.5
2,679,529	-		LRK53_RS12010	0.83	+1.1
2,679,529	-		LRK53_RS12010	0.83	-1.3
2,679,529	-		LRK53_RS12010	0.83	-1.0
2,679,529	-		LRK53_RS12010	0.83	+1.1
2,679,534	+		LRK53_RS12010	0.83	-0.5
2,679,535	-		LRK53_RS12010	0.83	+1.1
2,680,195	+		LRK53_RS12015	0.43	-0.5
2,680,195	+		LRK53_RS12015	0.43	+0.6
2,680,195	+		LRK53_RS12015	0.43	+1.1
2,680,196	-		LRK53_RS12015	0.43	+2.6
2,680,196	-		LRK53_RS12015	0.43	-0.5
2,680,196	-		LRK53_RS12015	0.43	-1.7
2,680,196	-		LRK53_RS12015	0.43	+0.5
2,680,196	-		LRK53_RS12015	0.43	+1.1
2,680,196	-		LRK53_RS12015	0.43	-1.8
2,680,225	+		LRK53_RS12015	0.49	-0.6
2,680,225	+		LRK53_RS12015	0.49	-1.1
2,680,225	+		LRK53_RS12015	0.49	+1.1
2,680,225	+		LRK53_RS12015	0.49	-3.1
2,680,225	+		LRK53_RS12015	0.49	-1.5
2,680,225	+		LRK53_RS12015	0.49	-0.9
2,680,225	+		LRK53_RS12015	0.49	+0.6
2,680,226	-		LRK53_RS12015	0.49	-0.8
2,680,226	-		LRK53_RS12015	0.49	-0.5
2,680,226	-		LRK53_RS12015	0.49	+0.1
2,680,226	-		LRK53_RS12015	0.49	+0.1
2,680,226	-		LRK53_RS12015	0.49	-0.7
2,680,226	-		LRK53_RS12015	0.49	-0.5
2,680,226	-		LRK53_RS12015	0.49	-1.8
2,680,226	-		LRK53_RS12015	0.49	-0.3
2,680,226	-		LRK53_RS12015	0.49	+2.1
2,680,226	-		LRK53_RS12015	0.49	+0.1
2,680,315	+		LRK53_RS12015	0.67	-2.6
2,680,315	+		LRK53_RS12015	0.67	-2.0
2,680,315	+		LRK53_RS12015	0.67	-1.4
2,680,315	+		LRK53_RS12015	0.67	-0.9
2,680,315	+		LRK53_RS12015	0.67	+0.6
2,680,315	+		LRK53_RS12015	0.67	-0.5
2,680,315	+		LRK53_RS12015	0.67	-3.0
2,680,315	+		LRK53_RS12015	0.67	-1.3
2,680,315	+		LRK53_RS12015	0.67	-0.8
2,680,315	+		LRK53_RS12015	0.67	+2.1
2,680,315	+		LRK53_RS12015	0.67	-2.1
2,680,315	+		LRK53_RS12015	0.67	-2.1
2,680,315	+		LRK53_RS12015	0.67	+0.1
2,680,315	+		LRK53_RS12015	0.67	+0.1
2,680,315	+		LRK53_RS12015	0.67	-0.5
2,680,316	-		LRK53_RS12015	0.68	+1.1
2,680,316	-		LRK53_RS12015	0.68	-1.8
2,680,316	-		LRK53_RS12015	0.68	+0.1
2,680,316	-		LRK53_RS12015	0.68	+0.7
2,680,316	-		LRK53_RS12015	0.68	+0.5
2,680,316	-		LRK53_RS12015	0.68	-1.3
2,680,316	-		LRK53_RS12015	0.68	+1.1
2,680,316	-		LRK53_RS12015	0.68	-0.9
2,680,316	-		LRK53_RS12015	0.68	-0.7
2,680,316	-		LRK53_RS12015	0.68	+1.1
2,680,316	-		LRK53_RS12015	0.68	-0.9
2,680,316	-		LRK53_RS12015	0.68	+0.6
2,680,610	+				+1.1
2,680,610	+				-2.3
2,680,610	+				-0.2
2,680,610	+				+1.1
2,680,610	+				+0.1
2,680,610	+				+0.6
2,680,611	-				+2.1
2,680,611	-				+0.3
2,680,611	-				-0.5
2,680,611	-				-0.3
2,680,611	-				-0.9
2,680,611	-				-1.9
2,680,644	+				-1.9
2,680,644	+				+1.1
2,680,645	-				+1.1
2,680,673	+				-0.3
2,680,673	+				-0.1
2,680,965	+		LRK53_RS12020	0.14	-0.4
2,680,965	+		LRK53_RS12020	0.14	-0.8
2,680,966	-		LRK53_RS12020	0.14	-1.1
2,680,966	-		LRK53_RS12020	0.14	-0.9