Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08605

Experiment: defined media with 20AA_mix

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with 20AA_mix
1,928,233	-				-0.1
1,928,329	+		LRK53_RS08600	0.13	-1.1
1,928,329	+		LRK53_RS08600	0.13	-0.1
1,928,329	+		LRK53_RS08600	0.13	-1.1
1,928,329	+		LRK53_RS08600	0.13	+0.2
1,928,329	+		LRK53_RS08600	0.13	-1.9
1,928,329	+		LRK53_RS08600	0.13	-2.1
1,928,330	-		LRK53_RS08600	0.13	+1.5
1,928,330	-		LRK53_RS08600	0.13	-1.8
1,928,330	-		LRK53_RS08600	0.13	+0.9
1,928,330	-		LRK53_RS08600	0.13	+0.9
1,928,437	+		LRK53_RS08600	0.27	-0.4
1,928,437	+		LRK53_RS08600	0.27	-1.0
1,928,437	+		LRK53_RS08600	0.27	-0.2
1,928,437	+		LRK53_RS08600	0.27	-0.7
1,928,437	+		LRK53_RS08600	0.27	-1.4
1,928,437	+		LRK53_RS08600	0.27	-0.1
1,928,437	+		LRK53_RS08600	0.27	-0.1
1,928,437	+		LRK53_RS08600	0.27	+0.9
1,928,437	+		LRK53_RS08600	0.27	-0.9
1,928,438	-		LRK53_RS08600	0.27	-0.9
1,928,438	-		LRK53_RS08600	0.27	-1.7
1,928,438	-		LRK53_RS08600	0.27	-1.7
1,928,438	-		LRK53_RS08600	0.27	-1.2
1,928,438	-		LRK53_RS08600	0.27	-2.5
1,928,438	-		LRK53_RS08600	0.27	-0.4
1,928,438	-		LRK53_RS08600	0.27	-1.2
1,928,438	-		LRK53_RS08600	0.27	-0.9
1,928,438	-		LRK53_RS08600	0.27	+1.9
1,928,452	+		LRK53_RS08600	0.29	+0.5
1,928,452	+		LRK53_RS08600	0.29	-1.1
1,928,453	-		LRK53_RS08600	0.29	-1.9
1,928,868	+		LRK53_RS08600	0.81	-0.6
1,928,868	+		LRK53_RS08600	0.81	-0.8
1,928,868	+		LRK53_RS08600	0.81	+0.3
1,928,868	+		LRK53_RS08600	0.81	+1.9
1,928,869	-		LRK53_RS08600	0.81	-0.2
1,928,869	-		LRK53_RS08600	0.81	-0.9
1,928,869	-		LRK53_RS08600	0.81	-0.7
1,928,869	-		LRK53_RS08600	0.81	-0.1
1,928,869	-		LRK53_RS08600	0.81	-1.7
1,928,920	+		LRK53_RS08600	0.88	-1.0
1,928,920	+		LRK53_RS08600	0.88	-1.2
1,928,920	+		LRK53_RS08600	0.88	-1.3
1,928,921	-		LRK53_RS08600	0.88	+1.5
1,928,921	-		LRK53_RS08600	0.88	-0.5
1,929,127	+				-0.7
1,929,324	+				-0.4
1,929,324	+				-0.7
1,929,325	-				-1.1
1,929,588	+		LRK53_RS08605	0.26	-1.1
1,929,588	+		LRK53_RS08605	0.26	-0.4
1,929,588	+		LRK53_RS08605	0.26	+0.6
1,929,588	+		LRK53_RS08605	0.26	-1.1
1,929,588	+		LRK53_RS08605	0.26	-1.8
1,929,588	+		LRK53_RS08605	0.26	-0.7
1,929,588	+		LRK53_RS08605	0.26	-0.2
1,929,588	+		LRK53_RS08605	0.26	-1.4
1,929,588	+		LRK53_RS08605	0.26	-0.5
1,929,588	+		LRK53_RS08605	0.26	+0.2
1,929,588	+		LRK53_RS08605	0.26	+0.9
1,929,589	-		LRK53_RS08605	0.26	-1.6
1,929,589	-		LRK53_RS08605	0.26	-2.1
1,929,589	-		LRK53_RS08605	0.26	+1.5
1,929,589	-		LRK53_RS08605	0.26	+0.4
1,929,589	-		LRK53_RS08605	0.26	-0.1
1,929,589	-		LRK53_RS08605	0.26	-0.5
1,929,589	-		LRK53_RS08605	0.26	-0.7
1,929,589	-		LRK53_RS08605	0.26	-0.6
1,929,589	-		LRK53_RS08605	0.26	+0.1
1,929,666	+		LRK53_RS08605	0.30	-1.3
1,929,666	+		LRK53_RS08605	0.30	-0.1
1,929,666	+		LRK53_RS08605	0.30	+0.5
1,929,667	-		LRK53_RS08605	0.30	-0.8
1,929,667	-		LRK53_RS08605	0.30	-0.8
1,929,667	-		LRK53_RS08605	0.30	+0.6
1,929,667	-		LRK53_RS08605	0.30	-0.9
1,929,684	+		LRK53_RS08605	0.31	+0.6
1,929,684	+		LRK53_RS08605	0.31	-0.1
1,929,684	+		LRK53_RS08605	0.31	-0.2
1,929,684	+		LRK53_RS08605	0.31	-0.7
1,929,684	+		LRK53_RS08605	0.31	+1.9
1,929,684	+		LRK53_RS08605	0.31	+0.1
1,929,684	+		LRK53_RS08605	0.31	+1.3
1,929,685	-		LRK53_RS08605	0.31	-0.4
1,929,685	-		LRK53_RS08605	0.31	-1.4
1,929,685	-		LRK53_RS08605	0.31	+0.9
1,929,685	-		LRK53_RS08605	0.31	+0.3
1,929,685	-		LRK53_RS08605	0.31	+0.3
1,929,685	-		LRK53_RS08605	0.31	-0.7
1,929,685	-		LRK53_RS08605	0.31	-0.9
1,929,750	+		LRK53_RS08605	0.35	+0.3
1,929,750	+		LRK53_RS08605	0.35	-2.1
1,929,750	+		LRK53_RS08605	0.35	-1.3
1,929,750	+		LRK53_RS08605	0.35	+1.5
1,929,750	+		LRK53_RS08605	0.35	-1.7
1,929,751	-		LRK53_RS08605	0.35	-1.7
1,929,756	+		LRK53_RS08605	0.36	+0.5
1,929,756	+		LRK53_RS08605	0.36	+2.9
1,929,757	-		LRK53_RS08605	0.36	-0.1
1,929,816	+		LRK53_RS08605	0.39	-0.9
1,929,817	-		LRK53_RS08605	0.39	-1.7
1,929,817	-		LRK53_RS08605	0.39	+0.1
1,929,817	-		LRK53_RS08605	0.39	-1.5
1,929,817	-		LRK53_RS08605	0.39	-0.7
1,929,825	+		LRK53_RS08605	0.40	-0.1
1,929,825	+		LRK53_RS08605	0.40	-3.4
1,929,825	+		LRK53_RS08605	0.40	-0.1
1,929,826	-		LRK53_RS08605	0.40	-0.8
1,929,826	-		LRK53_RS08605	0.40	-0.2
1,929,826	-		LRK53_RS08605	0.40	+1.9
1,929,826	-		LRK53_RS08605	0.40	-0.7
1,929,996	+		LRK53_RS08605	0.50	+0.9
1,929,996	+		LRK53_RS08605	0.50	+0.2
1,929,997	-		LRK53_RS08605	0.50	-0.1
1,929,997	-		LRK53_RS08605	0.50	-0.4
1,930,224	+		LRK53_RS08605	0.64	-1.7
1,930,380	+		LRK53_RS08605	0.73	+0.9
1,930,380	+		LRK53_RS08605	0.73	-0.1
1,930,380	+		LRK53_RS08605	0.73	+0.1
1,930,380	+		LRK53_RS08605	0.73	-1.4
1,930,381	-		LRK53_RS08605	0.73	-1.7
1,930,381	-		LRK53_RS08605	0.73	+0.9
1,930,524	+		LRK53_RS08605	0.82	-1.1
1,930,524	+		LRK53_RS08605	0.82	-0.1
1,930,524	+		LRK53_RS08605	0.82	+0.3
1,930,524	+		LRK53_RS08605	0.82	-2.1
1,930,524	+		LRK53_RS08605	0.82	+0.3
1,930,525	-		LRK53_RS08605	0.82	+0.9
1,930,525	-		LRK53_RS08605	0.82	-0.2
1,930,525	-		LRK53_RS08605	0.82	-3.3
1,930,525	-		LRK53_RS08605	0.82	-0.6
1,930,525	-		LRK53_RS08605	0.82	-2.4
1,930,525	-		LRK53_RS08605	0.82	-0.5
1,930,551	+		LRK53_RS08605	0.83	-1.4
1,930,625	+		LRK53_RS08605	0.88	-1.2
1,930,625	+		LRK53_RS08605	0.88	-1.4
1,930,626	-		LRK53_RS08605	0.88	-0.7
1,930,931	+				+0.2
1,930,931	+				+0.4
1,930,932	-				-1.9
1,930,932	-				-2.1
1,930,932	-				+0.1
1,930,932	-				-1.1
1,930,932	-				+0.1
1,930,932	-				-1.2
1,931,257	+		LRK53_RS08610	0.22	-2.2
1,931,257	+		LRK53_RS08610	0.22	-0.8
1,931,257	+		LRK53_RS08610	0.22	+2.5
1,931,258	-		LRK53_RS08610	0.22	-0.4
1,931,293	+		LRK53_RS08610	0.24	+0.6
1,931,293	+		LRK53_RS08610	0.24	-0.5
1,931,293	+		LRK53_RS08610	0.24	-1.1
1,931,293	+		LRK53_RS08610	0.24	-0.7
1,931,294	-		LRK53_RS08610	0.24	-1.7
1,931,294	-		LRK53_RS08610	0.24	-1.2
1,931,294	-		LRK53_RS08610	0.24	-0.4
1,931,294	-		LRK53_RS08610	0.24	-1.4
1,931,299	+		LRK53_RS08610	0.24	-1.7
1,931,299	+		LRK53_RS08610	0.24	+1.7
1,931,299	+		LRK53_RS08610	0.24	-0.7
1,931,299	+		LRK53_RS08610	0.24	-0.3
1,931,299	+		LRK53_RS08610	0.24	-0.1
1,931,299	+		LRK53_RS08610	0.24	-0.7
1,931,300	-		LRK53_RS08610	0.24	-2.1
1,931,300	-		LRK53_RS08610	0.24	-1.1
1,931,300	-		LRK53_RS08610	0.24	-0.9
1,931,300	-		LRK53_RS08610	0.24	-0.7
1,931,300	-		LRK53_RS08610	0.24	-2.1
1,931,300	-		LRK53_RS08610	0.24	+0.9
1,931,300	-		LRK53_RS08610	0.24	-0.7
1,931,300	-		LRK53_RS08610	0.24	-1.4
1,931,300	-		LRK53_RS08610	0.24	-0.2
1,931,300	-		LRK53_RS08610	0.24	-1.5
1,931,300	-		LRK53_RS08610	0.24	-0.6
1,931,428	+		LRK53_RS08610	0.32	-1.9
1,931,428	+		LRK53_RS08610	0.32	-1.1
1,931,428	+		LRK53_RS08610	0.32	+0.1
1,931,552	+		LRK53_RS08610	0.40	-1.1
1,931,552	+		LRK53_RS08610	0.40	+2.5
1,931,602	+		LRK53_RS08610	0.43	-0.3
1,931,602	+		LRK53_RS08610	0.43	-1.3
1,931,602	+		LRK53_RS08610	0.43	+0.9
1,931,602	+		LRK53_RS08610	0.43	-0.5
1,931,602	+		LRK53_RS08610	0.43	+0.9
1,931,602	+		LRK53_RS08610	0.43	-1.1
1,931,602	+		LRK53_RS08610	0.43	-0.5
1,931,602	+		LRK53_RS08610	0.43	+0.9
1,931,602	+		LRK53_RS08610	0.43	-0.7
1,931,602	+		LRK53_RS08610	0.43	-1.6
1,931,603	-		LRK53_RS08610	0.43	-0.9
1,931,603	-		LRK53_RS08610	0.43	+0.9
1,931,603	-		LRK53_RS08610	0.43	+0.9
1,931,603	-		LRK53_RS08610	0.43	-2.8
1,931,603	-		LRK53_RS08610	0.43	+0.9
1,931,603	-		LRK53_RS08610	0.43	+0.9
1,931,603	-		LRK53_RS08610	0.43	+0.2
1,931,603	-		LRK53_RS08610	0.43	-0.5
1,931,603	-		LRK53_RS08610	0.43	-0.7