Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS07680

Experiment: defined media with 20AA_mix

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with 20AA_mix
1,713,053	+		LRK53_RS07675	0.31	+0.3
1,713,235	-		LRK53_RS07675	0.45	-2.6
1,713,235	-		LRK53_RS07675	0.45	-1.6
1,713,282	-		LRK53_RS07675	0.48	-0.6
1,713,373	+		LRK53_RS07675	0.55	+1.0
1,713,373	+		LRK53_RS07675	0.55	-1.0
1,713,374	-		LRK53_RS07675	0.55	-0.3
1,713,413	+		LRK53_RS07675	0.58	-0.6
1,713,413	+		LRK53_RS07675	0.58	-1.0
1,713,413	+		LRK53_RS07675	0.58	-0.6
1,713,413	+		LRK53_RS07675	0.58	-1.6
1,713,414	-		LRK53_RS07675	0.58	-0.6
1,713,469	+		LRK53_RS07675	0.63	-0.6
1,713,469	+		LRK53_RS07675	0.63	-1.3
1,713,469	+		LRK53_RS07675	0.63	-0.6
1,713,469	+		LRK53_RS07675	0.63	-1.3
1,713,469	+		LRK53_RS07675	0.63	+2.6
1,713,469	+		LRK53_RS07675	0.63	+0.3
1,713,469	+		LRK53_RS07675	0.63	+0.2
1,713,469	+		LRK53_RS07675	0.63	+1.0
1,713,470	-		LRK53_RS07675	0.63	+0.0
1,713,470	-		LRK53_RS07675	0.63	+0.0
1,713,470	-		LRK53_RS07675	0.63	-1.6
1,713,538	+		LRK53_RS07675	0.68	-1.0
1,713,538	+		LRK53_RS07675	0.68	-0.3
1,713,615	+		LRK53_RS07675	0.74	-0.4
1,713,647	+		LRK53_RS07675	0.76	-0.2
1,713,647	+		LRK53_RS07675	0.76	-1.0
1,713,647	+		LRK53_RS07675	0.76	-0.3
1,713,647	+		LRK53_RS07675	0.76	+1.0
1,713,648	-		LRK53_RS07675	0.76	-1.0
1,713,648	-		LRK53_RS07675	0.76	-0.4
1,713,648	-		LRK53_RS07675	0.76	-0.2
1,713,648	-		LRK53_RS07675	0.76	+0.4
1,713,648	-		LRK53_RS07675	0.76	+1.0
1,713,648	-		LRK53_RS07675	0.76	-1.8
1,713,648	-		LRK53_RS07675	0.76	-1.3
1,713,648	-		LRK53_RS07675	0.76	+0.0
1,713,648	-		LRK53_RS07675	0.76	-0.3
1,713,648	-		LRK53_RS07675	0.76	+0.4
1,713,648	-		LRK53_RS07675	0.76	+0.0
1,713,996	+				-1.4
1,713,996	+				-1.0
1,713,996	+				-0.6
1,713,996	+				-1.8
1,713,997	-				-1.7
1,714,149	+		LRK53_RS07680	0.14	-1.0
1,714,149	+		LRK53_RS07680	0.14	-0.4
1,714,149	+		LRK53_RS07680	0.14	-2.0
1,714,149	+		LRK53_RS07680	0.14	+0.0
1,714,150	-		LRK53_RS07680	0.14	-1.4
1,714,158	+		LRK53_RS07680	0.15	+1.3
1,714,158	+		LRK53_RS07680	0.15	-0.6
1,714,158	+		LRK53_RS07680	0.15	-1.1
1,714,158	+		LRK53_RS07680	0.15	+0.0
1,714,158	+		LRK53_RS07680	0.15	-2.0
1,714,158	+		LRK53_RS07680	0.15	+0.0
1,714,158	+		LRK53_RS07680	0.15	-1.4
1,714,158	+		LRK53_RS07680	0.15	+0.3
1,714,158	+		LRK53_RS07680	0.15	-0.5
1,714,158	+		LRK53_RS07680	0.15	-2.3
1,714,158	+		LRK53_RS07680	0.15	-1.0
1,714,158	+		LRK53_RS07680	0.15	+0.4
1,714,158	+		LRK53_RS07680	0.15	-1.6
1,714,158	+		LRK53_RS07680	0.15	-0.4
1,714,158	+		LRK53_RS07680	0.15	+0.3
1,714,158	+		LRK53_RS07680	0.15	-1.0
1,714,158	+		LRK53_RS07680	0.15	-0.6
1,714,158	+		LRK53_RS07680	0.15	-0.1
1,714,159	-		LRK53_RS07680	0.15	+0.4
1,714,159	-		LRK53_RS07680	0.15	-0.7
1,714,159	-		LRK53_RS07680	0.15	+0.2
1,714,159	-		LRK53_RS07680	0.15	+1.0
1,714,159	-		LRK53_RS07680	0.15	+0.0
1,714,159	-		LRK53_RS07680	0.15	+1.2
1,714,159	-		LRK53_RS07680	0.15	-1.0
1,714,159	-		LRK53_RS07680	0.15	+0.3
1,714,159	-		LRK53_RS07680	0.15	+0.3
1,714,159	-		LRK53_RS07680	0.15	-1.6
1,714,159	-		LRK53_RS07680	0.15	-0.6
1,714,159	-		LRK53_RS07680	0.15	+0.7
1,714,159	-		LRK53_RS07680	0.15	-0.3
1,714,159	-		LRK53_RS07680	0.15	-1.6
1,714,159	-		LRK53_RS07680	0.15	-1.1
1,714,159	-		LRK53_RS07680	0.15	+0.4
1,714,178	+		LRK53_RS07680	0.17	-0.7
1,714,178	+		LRK53_RS07680	0.17	+0.3
1,714,178	+		LRK53_RS07680	0.17	-1.4
1,714,178	+		LRK53_RS07680	0.17	+0.4
1,714,178	+		LRK53_RS07680	0.17	-1.0
1,714,179	-		LRK53_RS07680	0.17	-1.0
1,714,179	-		LRK53_RS07680	0.17	-0.5
1,714,179	-		LRK53_RS07680	0.17	-0.0
1,714,179	-		LRK53_RS07680	0.17	+1.3
1,714,179	-		LRK53_RS07680	0.17	-1.0
1,714,203	+		LRK53_RS07680	0.20	+0.4
1,714,293	+		LRK53_RS07680	0.30	-0.4
1,714,293	+		LRK53_RS07680	0.30	-0.6
1,714,293	+		LRK53_RS07680	0.30	-0.1
1,714,293	+		LRK53_RS07680	0.30	-1.6
1,714,293	+		LRK53_RS07680	0.30	-0.6
1,714,293	+		LRK53_RS07680	0.30	+2.0
1,714,293	+		LRK53_RS07680	0.30	-0.4
1,714,293	+		LRK53_RS07680	0.30	-1.6
1,714,293	+		LRK53_RS07680	0.30	+0.0
1,714,293	+		LRK53_RS07680	0.30	+0.8
1,714,293	+		LRK53_RS07680	0.30	-1.7
1,714,294	-		LRK53_RS07680	0.30	-0.3
1,714,294	-		LRK53_RS07680	0.30	+1.6
1,714,294	-		LRK53_RS07680	0.30	-0.7
1,714,294	-		LRK53_RS07680	0.30	+0.4
1,714,294	-		LRK53_RS07680	0.30	-1.0
1,714,294	-		LRK53_RS07680	0.30	-0.6
1,714,294	-		LRK53_RS07680	0.30	+0.1
1,714,294	-		LRK53_RS07680	0.30	-0.5
1,714,383	-		LRK53_RS07680	0.40	-1.4
1,714,383	-		LRK53_RS07680	0.40	-1.3
1,714,428	+		LRK53_RS07680	0.45	-3.0
1,714,428	+		LRK53_RS07680	0.45	+0.0
1,714,428	+		LRK53_RS07680	0.45	+2.0
1,714,428	+		LRK53_RS07680	0.45	-0.6
1,714,428	+		LRK53_RS07680	0.45	-0.6
1,714,428	+		LRK53_RS07680	0.45	-0.1
1,714,428	+		LRK53_RS07680	0.45	-1.0
1,714,428	+		LRK53_RS07680	0.45	-0.7
1,714,428	+		LRK53_RS07680	0.45	+2.0
1,714,428	+		LRK53_RS07680	0.45	-0.9
1,714,429	-		LRK53_RS07680	0.45	+0.0
1,714,429	-		LRK53_RS07680	0.45	-1.0
1,714,429	-		LRK53_RS07680	0.45	-0.6
1,714,429	-		LRK53_RS07680	0.45	-1.3
1,714,429	-		LRK53_RS07680	0.45	+0.0
1,714,429	-		LRK53_RS07680	0.45	+0.3
1,714,429	-		LRK53_RS07680	0.45	-0.5
1,714,429	-		LRK53_RS07680	0.45	+0.7
1,714,429	-		LRK53_RS07680	0.45	+1.0
1,714,429	-		LRK53_RS07680	0.45	+0.0
1,714,429	-		LRK53_RS07680	0.45	+0.4
1,714,479	+		LRK53_RS07680	0.50	-0.3
1,714,479	+		LRK53_RS07680	0.50	-0.4
1,714,507	-		LRK53_RS07680	0.53	-1.4
1,714,507	-		LRK53_RS07680	0.53	-1.3
1,714,507	-		LRK53_RS07680	0.53	-0.6
1,714,947	+				+1.0
1,714,947	+				-0.7
1,714,947	+				+0.6
1,714,947	+				-2.3
1,714,947	+				-1.0
1,714,947	+				+1.0
1,714,947	+				+0.0
1,714,947	+				-0.6
1,714,947	+				+1.4
1,714,947	+				+2.0
1,714,947	+				+0.4
1,714,947	+				-1.0
1,714,947	+				+0.0
1,714,947	+				+0.6
1,714,947	+				+2.0
1,714,947	+				-0.7
1,714,947	+				+1.0
1,714,947	+				+2.3
1,714,947	+				+2.0
1,714,947	+				+1.0
1,714,947	+				-0.7
1,714,947	+				-1.6
1,714,948	-				-2.1
1,714,948	-				-0.4
1,714,948	-				-0.6
1,714,948	-				+1.0
1,714,948	-				+0.0
1,714,948	-				+1.6
1,714,948	-				-2.1
1,714,948	-				-0.6
1,714,948	-				+2.0
1,714,948	-				+0.4
1,714,948	-				-0.3
1,714,948	-				+1.0
1,714,948	-				+1.0
1,714,948	-				-0.3
1,714,948	-				-0.6
1,714,948	-				-1.2
1,714,948	-				-0.6
1,714,948	-				-0.8
1,714,948	-				+1.0
1,714,948	-				-0.3
1,714,948	-				+0.0
1,714,948	-				-1.0
1,714,948	-				-1.1
1,714,948	-				-1.0
1,714,948	-				+0.6
1,714,948	-				+1.0
1,714,948	-				-0.8
1,714,948	-				-0.3
1,714,948	-				-0.3
1,714,948	-				+0.0
1,714,948	-				+1.0
1,714,949	-				+0.0
1,715,345	+		LRK53_RS07685	0.14	+0.7
1,715,346	-		LRK53_RS07685	0.14	-1.1
1,715,498	+		LRK53_RS07685	0.22	+1.0
1,715,499	-		LRK53_RS07685	0.22	-0.6
1,715,686	+		LRK53_RS07685	0.31	-1.6
1,715,686	+		LRK53_RS07685	0.31	-1.0
1,715,686	+		LRK53_RS07685	0.31	+0.0
1,715,687	-		LRK53_RS07685	0.31	+0.4
1,715,687	-		LRK53_RS07685	0.31	+0.0
1,715,687	-		LRK53_RS07685	0.31	-2.1
1,715,687	-		LRK53_RS07685	0.31	-0.4
1,715,687	-		LRK53_RS07685	0.31	-1.0
1,715,687	-		LRK53_RS07685	0.31	-0.1
1,715,744	+		LRK53_RS07685	0.34	+1.0
1,715,745	-		LRK53_RS07685	0.34	-1.0
1,715,918	+		LRK53_RS07685	0.43	-1.0
1,715,918	+		LRK53_RS07685	0.43	-2.1
1,715,918	+		LRK53_RS07685	0.43	-0.6
1,715,919	-		LRK53_RS07685	0.43	-2.0