Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS07555

Experiment: defined media with 20AA_mix

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with 20AA_mix
1,687,312	-		LRK53_RS07550	0.39	-3.8
1,687,312	-		LRK53_RS07550	0.39	-1.5
1,687,381	+		LRK53_RS07550	0.45	+0.4
1,687,381	+		LRK53_RS07550	0.45	-0.6
1,687,381	+		LRK53_RS07550	0.45	-1.3
1,687,382	-		LRK53_RS07550	0.45	-1.0
1,687,382	-		LRK53_RS07550	0.45	-1.6
1,687,611	+		LRK53_RS07550	0.63	-1.4
1,687,999	+				-1.0
1,687,999	+				+0.0
1,687,999	+				-1.6
1,687,999	+				-0.8
1,687,999	+				-0.6
1,687,999	+				+2.0
1,687,999	+				-1.6
1,687,999	+				+0.0
1,687,999	+				-2.3
1,688,000	-				-1.8
1,688,000	-				-0.6
1,688,000	-				+0.4
1,688,000	-				-0.6
1,688,000	-				-1.0
1,688,000	-				-1.3
1,688,000	-				-1.8
1,688,000	-				-1.1
1,688,000	-				-3.8
1,688,000	-				-1.3
1,688,000	-				-0.6
1,688,000	-				+0.0
1,688,000	-				-0.3
1,688,000	-				-2.7
1,688,000	-				-0.6
1,688,000	-				-2.2
1,688,080	+				+1.0
1,688,080	+				+0.0
1,688,174	+				-2.9
1,688,174	+				-0.6
1,688,174	+				-0.6
1,688,174	+				-2.4
1,688,175	-				-2.6
1,688,175	-				+0.0
1,688,519	+		LRK53_RS07555	0.32	-0.8
1,688,519	+		LRK53_RS07555	0.32	-1.8
1,688,519	+		LRK53_RS07555	0.32	-1.0
1,688,519	+		LRK53_RS07555	0.32	-1.3
1,688,519	+		LRK53_RS07555	0.32	+1.0
1,688,519	+		LRK53_RS07555	0.32	-2.2
1,688,519	+		LRK53_RS07555	0.32	+0.0
1,688,520	-		LRK53_RS07555	0.32	-1.0
1,688,520	-		LRK53_RS07555	0.32	-0.2
1,688,520	-		LRK53_RS07555	0.32	-2.4
1,688,520	-		LRK53_RS07555	0.32	+0.0
1,688,520	-		LRK53_RS07555	0.32	+0.0
1,688,520	-		LRK53_RS07555	0.32	-0.6
1,688,705	+		LRK53_RS07555	0.46	-1.0
1,688,705	+		LRK53_RS07555	0.46	-0.6
1,688,705	+		LRK53_RS07555	0.46	-1.6
1,688,706	-		LRK53_RS07555	0.46	-1.4
1,688,706	-		LRK53_RS07555	0.46	-2.5
1,688,706	-		LRK53_RS07555	0.46	-1.3
1,688,706	-		LRK53_RS07555	0.46	-2.0
1,688,706	-		LRK53_RS07555	0.46	-1.6
1,688,706	-		LRK53_RS07555	0.46	-2.0
1,689,062	+		LRK53_RS07555	0.73	+1.6
1,689,062	+		LRK53_RS07555	0.73	-2.3
1,689,063	-		LRK53_RS07555	0.73	-2.6
1,689,063	-		LRK53_RS07555	0.73	-0.6
1,689,063	-		LRK53_RS07555	0.73	-1.7
1,689,063	-		LRK53_RS07555	0.73	-1.0
1,689,063	-		LRK53_RS07555	0.73	-2.0
1,689,092	+		LRK53_RS07555	0.76	-1.8
1,689,092	+		LRK53_RS07555	0.76	-1.8
1,689,092	+		LRK53_RS07555	0.76	-2.4
1,689,092	+		LRK53_RS07555	0.76	+0.4
1,689,092	+		LRK53_RS07555	0.76	-2.4
1,689,092	+		LRK53_RS07555	0.76	+0.4
1,689,092	+		LRK53_RS07555	0.76	-2.7
1,689,092	+		LRK53_RS07555	0.76	+2.0
1,689,092	+		LRK53_RS07555	0.76	-0.6
1,689,092	+		LRK53_RS07555	0.76	-2.6
1,689,092	+		LRK53_RS07555	0.76	-1.0
1,689,092	+		LRK53_RS07555	0.76	-2.1
1,689,092	+		LRK53_RS07555	0.76	+1.0
1,689,093	-		LRK53_RS07555	0.76	+0.0
1,689,093	-		LRK53_RS07555	0.76	-2.7
1,689,093	-		LRK53_RS07555	0.76	-3.3
1,689,093	-		LRK53_RS07555	0.76	-0.3
1,689,093	-		LRK53_RS07555	0.76	-0.6
1,689,093	-		LRK53_RS07555	0.76	-1.6
1,689,093	-		LRK53_RS07555	0.76	+0.6
1,689,093	-		LRK53_RS07555	0.76	-2.2
1,689,093	-		LRK53_RS07555	0.76	-1.0
1,689,093	-		LRK53_RS07555	0.76	-1.3
1,689,093	-		LRK53_RS07555	0.76	-4.0
1,689,093	-		LRK53_RS07555	0.76	-0.6
1,689,093	-		LRK53_RS07555	0.76	-1.3
1,689,093	-		LRK53_RS07555	0.76	-1.0
1,689,107	+		LRK53_RS07555	0.77	-1.0
1,689,107	+		LRK53_RS07555	0.77	-1.0
1,689,107	+		LRK53_RS07555	0.77	+1.0
1,689,107	+		LRK53_RS07555	0.77	-1.1
1,689,107	+		LRK53_RS07555	0.77	-1.0
1,689,107	+		LRK53_RS07555	0.77	+0.0
1,689,107	+		LRK53_RS07555	0.77	-1.6
1,689,107	+		LRK53_RS07555	0.77	-1.6
1,689,107	+		LRK53_RS07555	0.77	+1.0
1,689,107	+		LRK53_RS07555	0.77	-2.4
1,689,107	+		LRK53_RS07555	0.77	-1.3
1,689,108	-		LRK53_RS07555	0.77	-0.6
1,689,108	-		LRK53_RS07555	0.77	+1.0
1,689,108	-		LRK53_RS07555	0.77	-1.4
1,689,108	-		LRK53_RS07555	0.77	+0.0
1,689,108	-		LRK53_RS07555	0.77	-2.0
1,689,108	-		LRK53_RS07555	0.77	-0.6
1,689,108	-		LRK53_RS07555	0.77	-1.3
1,689,108	-		LRK53_RS07555	0.77	-2.4
1,689,108	-		LRK53_RS07555	0.77	-1.0
1,689,108	-		LRK53_RS07555	0.77	-1.6
1,689,108	-		LRK53_RS07555	0.77	-0.6
1,689,149	+		LRK53_RS07555	0.80	-2.4
1,689,150	-		LRK53_RS07555	0.80	-1.0
1,689,150	-		LRK53_RS07555	0.80	+0.0
1,689,150	-		LRK53_RS07555	0.80	-1.6
1,689,150	-		LRK53_RS07555	0.80	+0.0
1,689,274	+		LRK53_RS07555	0.89	-2.2
1,689,274	+		LRK53_RS07555	0.89	-1.8
1,689,274	+		LRK53_RS07555	0.89	-1.6
1,689,274	+		LRK53_RS07555	0.89	-0.6
1,689,274	+		LRK53_RS07555	0.89	-2.7
1,689,274	+		LRK53_RS07555	0.89	-1.0
1,689,274	+		LRK53_RS07555	0.89	-1.6
1,689,274	+		LRK53_RS07555	0.89	-1.3
1,689,275	-		LRK53_RS07555	0.89	-3.7
1,689,275	-		LRK53_RS07555	0.89	-1.8
1,689,275	-		LRK53_RS07555	0.89	-0.6
1,689,275	-		LRK53_RS07555	0.89	-4.3
1,689,275	-		LRK53_RS07555	0.89	-1.8
1,689,275	-		LRK53_RS07555	0.89	-2.3
1,689,275	-		LRK53_RS07555	0.89	+1.0
1,689,275	-		LRK53_RS07555	0.89	+1.0
1,689,275	-		LRK53_RS07555	0.89	-1.1
1,689,275	-		LRK53_RS07555	0.89	+0.0
1,689,275	-		LRK53_RS07555	0.89	-1.9
1,689,275	-		LRK53_RS07555	0.89	-4.3
1,689,275	-		LRK53_RS07555	0.89	-3.5
1,689,275	-		LRK53_RS07555	0.89	-1.6
1,689,281	+		LRK53_RS07555	0.90	-2.0
1,689,281	+		LRK53_RS07555	0.90	-1.3
1,689,281	+		LRK53_RS07555	0.90	+0.0
1,689,281	+		LRK53_RS07555	0.90	-0.6
1,689,281	+		LRK53_RS07555	0.90	-0.6
1,689,282	-		LRK53_RS07555	0.90	-1.3
1,689,282	-		LRK53_RS07555	0.90	+0.0
1,689,282	-		LRK53_RS07555	0.90	-0.2
1,689,282	-		LRK53_RS07555	0.90	-0.6
1,689,282	-		LRK53_RS07555	0.90	-0.8
1,689,282	-		LRK53_RS07555	0.90	-1.8
1,689,282	-		LRK53_RS07555	0.90	-2.1
1,689,282	-		LRK53_RS07555	0.90	-2.3
1,689,282	-		LRK53_RS07555	0.90	-0.6
1,689,284	+				-2.0
1,689,284	+				-1.3
1,689,284	+				+0.0
1,689,284	+				-1.3
1,689,284	+				-1.6
1,689,284	+				-1.8
1,689,285	-				-3.2
1,689,285	-				-1.3
1,689,285	-				-2.4
1,689,285	-				+2.0
1,689,420	+				-1.0
1,689,420	+				+0.0
1,689,420	+				-0.9
1,689,420	+				-2.1
1,689,421	-				-2.0
1,689,421	-				-1.0
1,689,421	-				-2.8
1,689,422	+				+0.0
1,689,422	+				-0.6
1,689,422	+				-2.1
1,689,423	-				-0.6
1,689,423	-				-1.5
1,689,423	-				-0.7
1,689,423	-				-1.6
1,689,423	-				-0.7
1,689,423	-				-1.0
1,689,494	+				+1.0
1,689,494	+				-1.3
1,689,494	+				-0.6
1,689,494	+				-1.6
1,689,816	+		LRK53_RS07560	0.27	-2.6
1,689,817	-		LRK53_RS07560	0.27	-2.7
1,689,817	-		LRK53_RS07560	0.27	-1.3
1,689,817	-		LRK53_RS07560	0.27	-1.6
1,689,876	+		LRK53_RS07560	0.33	+0.0
1,689,876	+		LRK53_RS07560	0.33	-2.1
1,689,877	-		LRK53_RS07560	0.33	-1.0
1,689,877	-		LRK53_RS07560	0.33	-1.0
1,689,877	-		LRK53_RS07560	0.33	-2.8
1,689,897	+		LRK53_RS07560	0.36	-0.6
1,689,897	+		LRK53_RS07560	0.36	-2.1
1,689,897	+		LRK53_RS07560	0.36	+0.0
1,689,897	+		LRK53_RS07560	0.36	-0.6
1,689,897	+		LRK53_RS07560	0.36	-0.7
1,689,897	+		LRK53_RS07560	0.36	-1.0
1,689,897	+		LRK53_RS07560	0.36	-1.3
1,689,897	+		LRK53_RS07560	0.36	-1.8
1,689,897	+		LRK53_RS07560	0.36	-1.7
1,689,897	+		LRK53_RS07560	0.36	-2.6
1,689,897	+		LRK53_RS07560	0.36	-2.7
1,689,898	-		LRK53_RS07560	0.36	-0.6
1,689,898	-		LRK53_RS07560	0.36	-3.3
1,689,898	-		LRK53_RS07560	0.36	-3.4
1,689,900	+		LRK53_RS07560	0.36	-0.6
1,689,900	+		LRK53_RS07560	0.36	+1.0
1,689,900	+		LRK53_RS07560	0.36	+0.0
1,689,900	+		LRK53_RS07560	0.36	-0.6
1,689,900	+		LRK53_RS07560	0.36	-0.6
1,689,900	+		LRK53_RS07560	0.36	-1.5
1,689,901	-		LRK53_RS07560	0.36	-2.3
1,689,901	-		LRK53_RS07560	0.36	-1.3
1,689,901	-		LRK53_RS07560	0.36	-1.9
1,689,901	-		LRK53_RS07560	0.36	-1.0
1,689,901	-		LRK53_RS07560	0.36	+1.0
1,689,901	-		LRK53_RS07560	0.36	-2.4
1,689,966	+		LRK53_RS07560	0.43	-1.6
1,689,967	-		LRK53_RS07560	0.43	+0.8
1,689,967	-		LRK53_RS07560	0.43	-2.0
1,690,116	+		LRK53_RS07560	0.58	+1.0
1,690,116	+		LRK53_RS07560	0.58	-2.0
1,690,117	-		LRK53_RS07560	0.59	-1.6
1,690,233	+		LRK53_RS07560	0.71	-2.0
1,690,233	+		LRK53_RS07560	0.71	-2.1
1,690,233	+		LRK53_RS07560	0.71	-1.8
1,690,233	+		LRK53_RS07560	0.71	-0.6
1,690,233	+		LRK53_RS07560	0.71	-3.2
1,690,233	+		LRK53_RS07560	0.71	-1.0
1,690,233	+		LRK53_RS07560	0.71	-1.6
1,690,233	+		LRK53_RS07560	0.71	-1.3
1,690,234	-		LRK53_RS07560	0.71	-1.8
1,690,234	-		LRK53_RS07560	0.71	-2.0
1,690,234	-		LRK53_RS07560	0.71	+0.0
1,690,234	-		LRK53_RS07560	0.71	-1.3
1,690,234	-		LRK53_RS07560	0.71	-0.2
1,690,234	-		LRK53_RS07560	0.71	+1.0
1,690,234	-		LRK53_RS07560	0.71	-1.3
1,690,234	-		LRK53_RS07560	0.71	-1.5
1,690,234	-		LRK53_RS07560	0.71	-2.7
1,690,234	-		LRK53_RS07560	0.71	-2.0
1,690,287	+		LRK53_RS07560	0.76	-3.8
1,690,287	+		LRK53_RS07560	0.76	-0.8
1,690,287	+		LRK53_RS07560	0.76	-1.8
1,690,288	-		LRK53_RS07560	0.77	+0.0
1,690,288	-		LRK53_RS07560	0.77	-2.6
1,690,356	+		LRK53_RS07560	0.84	+1.0
1,690,356	+		LRK53_RS07560	0.84	-2.3
1,690,356	+		LRK53_RS07560	0.84	-0.6
1,690,357	-		LRK53_RS07560	0.84	+0.4
1,690,357	-		LRK53_RS07560	0.84	-1.8