Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS06000

Experiment: defined media with 20AA_mix

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with 20AA_mix
1,382,536	+		LRK53_RS05995	0.26	+1.1
1,382,536	+		LRK53_RS05995	0.26	-1.3
1,382,536	+		LRK53_RS05995	0.26	-0.9
1,382,537	-		LRK53_RS05995	0.26	+0.1
1,382,537	-		LRK53_RS05995	0.26	-1.3
1,382,537	-		LRK53_RS05995	0.26	-1.3
1,382,537	-		LRK53_RS05995	0.26	-1.9
1,382,537	-		LRK53_RS05995	0.26	-0.8
1,382,537	-		LRK53_RS05995	0.26	-0.9
1,382,537	-		LRK53_RS05995	0.26	-0.9
1,382,537	-		LRK53_RS05995	0.26	-1.9
1,382,698	-		LRK53_RS05995	0.39	-1.3
1,382,717	+		LRK53_RS05995	0.41	-0.9
1,382,717	+		LRK53_RS05995	0.41	-3.3
1,382,717	+		LRK53_RS05995	0.41	-2.4
1,382,717	+		LRK53_RS05995	0.41	-1.9
1,382,717	+		LRK53_RS05995	0.41	-0.5
1,382,718	-		LRK53_RS05995	0.41	+0.1
1,382,718	-		LRK53_RS05995	0.41	-1.5
1,382,718	-		LRK53_RS05995	0.41	+0.1
1,382,718	-		LRK53_RS05995	0.41	-2.8
1,382,718	-		LRK53_RS05995	0.41	+1.1
1,382,718	-		LRK53_RS05995	0.41	-0.5
1,382,718	-		LRK53_RS05995	0.41	+0.1
1,382,807	+		LRK53_RS05995	0.48	-0.5
1,382,936	+		LRK53_RS05995	0.58	+1.1
1,382,936	+		LRK53_RS05995	0.58	-1.3
1,382,936	+		LRK53_RS05995	0.58	-0.5
1,382,936	+		LRK53_RS05995	0.58	-0.3
1,382,936	+		LRK53_RS05995	0.58	-2.5
1,382,936	+		LRK53_RS05995	0.58	-2.2
1,382,936	+		LRK53_RS05995	0.58	+0.1
1,382,936	+		LRK53_RS05995	0.58	-1.5
1,382,936	+		LRK53_RS05995	0.58	-1.7
1,382,937	-		LRK53_RS05995	0.58	-2.6
1,382,937	-		LRK53_RS05995	0.58	+1.1
1,382,937	-		LRK53_RS05995	0.58	-0.6
1,382,937	-		LRK53_RS05995	0.58	-0.5
1,382,937	-		LRK53_RS05995	0.58	-0.5
1,382,937	-		LRK53_RS05995	0.58	-0.9
1,382,937	-		LRK53_RS05995	0.58	-1.3
1,382,937	-		LRK53_RS05995	0.58	-1.5
1,382,937	-		LRK53_RS05995	0.58	-1.9
1,382,937	-		LRK53_RS05995	0.58	-1.4
1,382,937	-		LRK53_RS05995	0.58	-0.9
1,382,937	-		LRK53_RS05995	0.58	-2.3
1,382,937	-		LRK53_RS05995	0.58	-0.5
1,382,937	-		LRK53_RS05995	0.58	-1.9
1,382,937	-		LRK53_RS05995	0.58	-1.5
1,382,937	-		LRK53_RS05995	0.58	-0.5
1,382,981	-		LRK53_RS05995	0.62	-0.8
1,382,995	+		LRK53_RS05995	0.63	-0.9
1,382,996	-		LRK53_RS05995	0.63	-1.5
1,382,996	-		LRK53_RS05995	0.63	+0.1
1,382,996	-		LRK53_RS05995	0.63	-2.0
1,382,996	-		LRK53_RS05995	0.63	-2.3
1,383,113	-		LRK53_RS05995	0.73	-1.3
1,383,165	+		LRK53_RS05995	0.77	-3.2
1,383,165	+		LRK53_RS05995	0.77	-1.7
1,383,165	+		LRK53_RS05995	0.77	-1.3
1,383,167	+		LRK53_RS05995	0.77	+0.5
1,383,167	+		LRK53_RS05995	0.77	+0.1
1,383,167	+		LRK53_RS05995	0.77	-0.5
1,383,167	+		LRK53_RS05995	0.77	-1.9
1,383,167	+		LRK53_RS05995	0.77	+0.1
1,383,167	+		LRK53_RS05995	0.77	+0.6
1,383,167	+		LRK53_RS05995	0.77	+0.7
1,383,167	+		LRK53_RS05995	0.77	+1.1
1,383,167	+		LRK53_RS05995	0.77	-1.6
1,383,167	+		LRK53_RS05995	0.77	-1.5
1,383,167	+		LRK53_RS05995	0.77	-1.7
1,383,167	+		LRK53_RS05995	0.77	-0.5
1,383,167	+		LRK53_RS05995	0.77	-1.4
1,383,167	+		LRK53_RS05995	0.77	+1.1
1,383,167	+		LRK53_RS05995	0.77	-0.5
1,383,167	+		LRK53_RS05995	0.77	-1.5
1,383,167	+		LRK53_RS05995	0.77	+2.1
1,383,167	+		LRK53_RS05995	0.77	+0.1
1,383,167	+		LRK53_RS05995	0.77	-1.5
1,383,168	-		LRK53_RS05995	0.77	-1.5
1,383,168	-		LRK53_RS05995	0.77	-1.5
1,383,168	-		LRK53_RS05995	0.77	-4.1
1,383,168	-		LRK53_RS05995	0.77	-1.7
1,383,168	-		LRK53_RS05995	0.77	-2.1
1,383,168	-		LRK53_RS05995	0.77	-2.8
1,383,168	-		LRK53_RS05995	0.77	-1.7
1,383,168	-		LRK53_RS05995	0.77	-1.3
1,383,168	-		LRK53_RS05995	0.77	-0.9
1,383,168	-		LRK53_RS05995	0.77	+1.1
1,383,168	-		LRK53_RS05995	0.77	-0.9
1,383,168	-		LRK53_RS05995	0.77	-0.9
1,383,168	-		LRK53_RS05995	0.77	-0.7
1,383,168	-		LRK53_RS05995	0.77	-0.9
1,383,168	-		LRK53_RS05995	0.77	-1.7
1,383,168	-		LRK53_RS05995	0.77	+0.1
1,383,168	-		LRK53_RS05995	0.77	+1.4
1,383,168	-		LRK53_RS05995	0.77	-1.3
1,383,168	-		LRK53_RS05995	0.77	-0.5
1,383,168	-		LRK53_RS05995	0.77	-2.1
1,383,168	-		LRK53_RS05995	0.77	+1.1
1,383,168	-		LRK53_RS05995	0.77	-3.0
1,383,168	-		LRK53_RS05995	0.77	-2.3
1,383,168	-		LRK53_RS05995	0.77	+1.1
1,383,196	+		LRK53_RS05995	0.79	-0.5
1,383,196	+		LRK53_RS05995	0.79	-2.6
1,383,196	+		LRK53_RS05995	0.79	-0.9
1,383,215	+		LRK53_RS05995	0.81	-0.5
1,383,367	-				-2.3
1,383,367	-				+0.5
1,383,398	-				-1.3
1,383,495	+				+1.1
1,383,496	-				-1.6
1,383,496	-				+0.1
1,383,504	-				-1.1
1,383,608	+				-2.5
1,383,608	+				-2.3
1,383,608	+				-1.6
1,383,608	+				-1.9
1,383,608	+				+1.1
1,383,608	+				-1.9
1,383,608	+				-1.3
1,383,608	+				-1.7
1,383,608	+				-0.5
1,383,608	+				-0.3
1,383,608	+				-1.8
1,383,609	-				-1.5
1,383,609	-				-1.1
1,383,609	-				+1.1
1,383,628	+				+0.5
1,383,712	+		LRK53_RS06000	0.13	+0.1
1,383,713	-		LRK53_RS06000	0.13	+0.1
1,383,721	+		LRK53_RS06000	0.13	-1.8
1,383,721	+		LRK53_RS06000	0.13	-1.5
1,383,721	+		LRK53_RS06000	0.13	+0.1
1,383,721	+		LRK53_RS06000	0.13	+0.1
1,383,721	+		LRK53_RS06000	0.13	-1.4
1,383,722	-		LRK53_RS06000	0.14	-0.1
1,383,869	+		LRK53_RS06000	0.21	-0.5
1,383,870	-		LRK53_RS06000	0.21	+0.1
1,383,870	-		LRK53_RS06000	0.21	-1.5
1,384,009	+		LRK53_RS06000	0.28	-1.9
1,384,009	+		LRK53_RS06000	0.28	+0.1
1,384,010	-		LRK53_RS06000	0.28	-0.9
1,384,010	-		LRK53_RS06000	0.28	-0.5
1,384,043	-		LRK53_RS06000	0.30	-0.5
1,384,051	+		LRK53_RS06000	0.30	-0.9
1,384,052	-		LRK53_RS06000	0.30	+0.1
1,384,060	+		LRK53_RS06000	0.31	+1.1
1,384,060	+		LRK53_RS06000	0.31	-1.4
1,384,060	+		LRK53_RS06000	0.31	+0.1
1,384,060	+		LRK53_RS06000	0.31	+1.1
1,384,061	-		LRK53_RS06000	0.31	+0.1
1,384,061	-		LRK53_RS06000	0.31	-2.1
1,384,061	-		LRK53_RS06000	0.31	-1.5
1,384,061	-		LRK53_RS06000	0.31	-1.8
1,384,061	-		LRK53_RS06000	0.31	-2.3
1,384,061	-		LRK53_RS06000	0.31	-1.8
1,384,061	-		LRK53_RS06000	0.31	-0.5
1,384,079	-		LRK53_RS06000	0.32	-1.5
1,384,207	+		LRK53_RS06000	0.38	-1.3
1,384,207	+		LRK53_RS06000	0.38	-0.9
1,384,207	+		LRK53_RS06000	0.38	+0.5
1,384,208	-		LRK53_RS06000	0.38	+0.1
1,384,269	+		LRK53_RS06000	0.41	+0.1
1,384,269	+		LRK53_RS06000	0.41	-1.1
1,384,270	-		LRK53_RS06000	0.41	-0.9
1,384,270	-		LRK53_RS06000	0.41	-1.1
1,384,288	+		LRK53_RS06000	0.42	+1.1
1,384,288	+		LRK53_RS06000	0.42	-1.5
1,384,288	+		LRK53_RS06000	0.42	-1.3
1,384,288	+		LRK53_RS06000	0.42	-0.5
1,384,289	-		LRK53_RS06000	0.42	+1.1
1,384,289	-		LRK53_RS06000	0.42	-1.8
1,384,289	-		LRK53_RS06000	0.42	-1.3
1,384,303	+		LRK53_RS06000	0.43	+1.1
1,384,303	+		LRK53_RS06000	0.43	+2.6
1,384,303	+		LRK53_RS06000	0.43	-0.5
1,384,304	-		LRK53_RS06000	0.43	-0.9
1,384,495	+		LRK53_RS06000	0.52	-2.3
1,384,540	+		LRK53_RS06000	0.55	-1.8
1,384,540	+		LRK53_RS06000	0.55	+0.1
1,384,540	+		LRK53_RS06000	0.55	+0.1
1,384,540	+		LRK53_RS06000	0.55	-0.5
1,384,541	-		LRK53_RS06000	0.55	-2.1
1,384,541	-		LRK53_RS06000	0.55	-2.8
1,384,541	-		LRK53_RS06000	0.55	-1.3
1,384,737	+		LRK53_RS06000	0.65	+1.1
1,384,737	+		LRK53_RS06000	0.65	-1.8
1,384,737	+		LRK53_RS06000	0.65	-0.5
1,384,737	+		LRK53_RS06000	0.65	-2.3
1,384,737	+		LRK53_RS06000	0.65	-1.1
1,384,738	-		LRK53_RS06000	0.65	-0.9
1,384,738	-		LRK53_RS06000	0.65	-3.3
1,384,783	+		LRK53_RS06000	0.67	+0.1
1,384,784	-		LRK53_RS06000	0.67	-1.8
1,384,933	+		LRK53_RS06000	0.75	+0.5
1,384,993	+		LRK53_RS06000	0.78	+0.1
1,384,993	+		LRK53_RS06000	0.78	-1.4
1,384,993	+		LRK53_RS06000	0.78	-1.5
1,384,993	+		LRK53_RS06000	0.78	-0.5
1,384,993	+		LRK53_RS06000	0.78	-0.5
1,384,993	+		LRK53_RS06000	0.78	-1.3
1,384,994	-		LRK53_RS06000	0.78	-0.8
1,384,994	-		LRK53_RS06000	0.78	+0.1
1,384,994	-		LRK53_RS06000	0.78	-1.1
1,385,116	+		LRK53_RS06000	0.84	-1.3
1,385,116	+		LRK53_RS06000	0.84	+0.8
1,385,116	+		LRK53_RS06000	0.84	-1.8
1,385,116	+		LRK53_RS06000	0.84	+1.1
1,385,116	+		LRK53_RS06000	0.84	-0.5
1,385,116	+		LRK53_RS06000	0.84	-0.5
1,385,117	-		LRK53_RS06000	0.84	-1.9
1,385,117	-		LRK53_RS06000	0.84	-1.3
1,385,117	-		LRK53_RS06000	0.84	-0.5
1,385,117	-		LRK53_RS06000	0.84	-2.6
1,385,117	-		LRK53_RS06000	0.84	-0.5
1,385,170	+		LRK53_RS06000	0.86	-2.4
1,385,194	+		LRK53_RS06000	0.88	-0.9
1,385,194	+		LRK53_RS06000	0.88	-0.3
1,385,194	+		LRK53_RS06000	0.88	+2.6
1,385,194	+		LRK53_RS06000	0.88	-0.9
1,385,194	+		LRK53_RS06000	0.88	+0.1
1,385,195	-		LRK53_RS06000	0.88	-2.3
1,385,195	-		LRK53_RS06000	0.88	-3.2
1,385,195	-		LRK53_RS06000	0.88	-0.5
1,385,195	-		LRK53_RS06000	0.88	-1.5
1,385,195	-		LRK53_RS06000	0.88	+1.1
1,385,195	-		LRK53_RS06000	0.88	-1.5
1,385,195	-		LRK53_RS06000	0.88	-1.3
1,385,195	-		LRK53_RS06000	0.88	+1.1
1,385,195	-		LRK53_RS06000	0.88	+0.1
1,385,327	-				+0.4
1,385,365	+				-0.8
1,385,365	+				+0.1
1,385,365	+				+0.1
1,385,365	+				-1.3
1,385,365	+				-1.8
1,385,366	-				-1.5
1,385,366	-				+2.1
1,385,476	+				-2.6
1,385,476	+				-1.3
1,385,476	+				+0.1
1,385,476	+				-0.9
1,385,476	+				-0.9
1,385,476	+				-2.0
1,385,476	+				-1.3
1,385,476	+				-1.8
1,385,476	+				-0.3
1,385,476	+				-0.5
1,385,476	+				-1.5
1,385,476	+				-2.9
1,385,476	+				+0.1
1,385,477	-				-0.3
1,385,477	-				-0.5
1,385,477	-				-0.4
1,385,477	-				+0.1
1,385,477	-				-1.9
1,385,477	-				-0.8
1,385,477	-				-0.1
1,385,477	-				-0.9
1,385,477	-				-1.5
1,385,477	-				-0.1
1,385,477	-				+0.1
1,385,477	-				-2.3
1,385,477	-				-0.8
1,385,477	-				+0.1
1,385,477	-				-0.9
1,385,544	+				-1.3
1,385,545	-				-0.5
1,385,545	-				-3.4
1,385,545	-				-2.4
1,385,545	-				-0.3
1,385,545	-				-2.0
1,385,545	-				+0.1
1,385,790	+		LRK53_RS06005	0.17	-1.8
1,385,790	+		LRK53_RS06005	0.17	-0.5
1,385,790	+		LRK53_RS06005	0.17	-2.0
1,385,790	+		LRK53_RS06005	0.17	-2.4
1,385,790	+		LRK53_RS06005	0.17	+1.1
1,385,790	+		LRK53_RS06005	0.17	-0.9
1,385,790	+		LRK53_RS06005	0.17	-2.6
1,385,791	-		LRK53_RS06005	0.18	+0.1
1,385,791	-		LRK53_RS06005	0.18	-0.4
1,385,791	-		LRK53_RS06005	0.18	-3.2
1,385,791	-		LRK53_RS06005	0.18	+0.1
1,385,791	-		LRK53_RS06005	0.18	-2.1
1,385,791	-		LRK53_RS06005	0.18	-1.3
1,385,791	-		LRK53_RS06005	0.18	-1.5
1,385,791	-		LRK53_RS06005	0.18	+0.5
1,385,791	-		LRK53_RS06005	0.18	-3.0
1,385,791	-		LRK53_RS06005	0.18	+0.5
1,385,791	-		LRK53_RS06005	0.18	-3.3
1,385,791	-		LRK53_RS06005	0.18	+0.1
1,385,791	-		LRK53_RS06005	0.18	+0.1
1,385,791	-		LRK53_RS06005	0.18	+0.1
1,385,947	+		LRK53_RS06005	0.25	-2.5
1,385,947	+		LRK53_RS06005	0.25	-1.5
1,386,065	+		LRK53_RS06005	0.31	-1.9
1,386,065	+		LRK53_RS06005	0.31	-0.9
1,386,065	+		LRK53_RS06005	0.31	-2.8
1,386,065	+		LRK53_RS06005	0.31	+1.1
1,386,065	+		LRK53_RS06005	0.31	+0.1
1,386,065	+		LRK53_RS06005	0.31	-1.8
1,386,065	+		LRK53_RS06005	0.31	-0.3
1,386,065	+		LRK53_RS06005	0.31	+0.1
1,386,065	+		LRK53_RS06005	0.31	-1.5
1,386,066	-		LRK53_RS06005	0.31	-0.9
1,386,066	-		LRK53_RS06005	0.31	-0.5
1,386,066	-		LRK53_RS06005	0.31	-2.5
1,386,066	-		LRK53_RS06005	0.31	-1.3
1,386,066	-		LRK53_RS06005	0.31	+1.1
1,386,066	-		LRK53_RS06005	0.31	+1.1
1,386,089	+		LRK53_RS06005	0.32	-0.5
1,386,089	+		LRK53_RS06005	0.32	-3.7
1,386,089	+		LRK53_RS06005	0.32	-2.0
1,386,089	+		LRK53_RS06005	0.32	-0.5
1,386,089	+		LRK53_RS06005	0.32	+0.3
1,386,090	-		LRK53_RS06005	0.32	-1.3
1,386,090	-		LRK53_RS06005	0.32	-0.9
1,386,090	-		LRK53_RS06005	0.32	+0.1
1,386,190	+		LRK53_RS06005	0.37	-0.5
1,386,190	+		LRK53_RS06005	0.37	-1.5
1,386,227	-		LRK53_RS06005	0.39	-0.8
1,386,242	+		LRK53_RS06005	0.40	-1.5
1,386,242	+		LRK53_RS06005	0.40	-1.4
1,386,242	+		LRK53_RS06005	0.40	-0.9
1,386,243	-		LRK53_RS06005	0.40	-0.8
1,386,267	+		LRK53_RS06005	0.41	-0.5
1,386,267	+		LRK53_RS06005	0.41	-0.5
1,386,267	+		LRK53_RS06005	0.41	-0.9
1,386,267	+		LRK53_RS06005	0.41	+2.1
1,386,267	+		LRK53_RS06005	0.41	-0.5
1,386,267	+		LRK53_RS06005	0.41	+0.1
1,386,267	+		LRK53_RS06005	0.41	-1.3
1,386,267	+		LRK53_RS06005	0.41	-1.3
1,386,267	+		LRK53_RS06005	0.41	-2.4
1,386,268	-		LRK53_RS06005	0.41	+0.1
1,386,268	-		LRK53_RS06005	0.41	-0.5
1,386,268	-		LRK53_RS06005	0.41	+0.5
1,386,268	-		LRK53_RS06005	0.41	+0.1
1,386,268	-		LRK53_RS06005	0.41	-1.9
1,386,268	-		LRK53_RS06005	0.41	-0.9
1,386,268	-		LRK53_RS06005	0.41	+2.1
1,386,268	-		LRK53_RS06005	0.41	+1.1
1,386,268	-		LRK53_RS06005	0.41	-1.5
1,386,268	-		LRK53_RS06005	0.41	-1.9
1,386,276	-		LRK53_RS06005	0.42	-1.9
1,386,342	+		LRK53_RS06005	0.45	-2.6
1,386,342	+		LRK53_RS06005	0.45	+0.1
1,386,342	+		LRK53_RS06005	0.45	-0.5
1,386,342	+		LRK53_RS06005	0.45	+0.1
1,386,342	+		LRK53_RS06005	0.45	-1.8
1,386,342	+		LRK53_RS06005	0.45	-1.8
1,386,342	+		LRK53_RS06005	0.45	-1.3
1,386,343	-		LRK53_RS06005	0.45	-0.5
1,386,343	-		LRK53_RS06005	0.45	-3.6
1,386,343	-		LRK53_RS06005	0.45	-0.9
1,386,343	-		LRK53_RS06005	0.45	-2.8
1,386,343	-		LRK53_RS06005	0.45	-2.6
1,386,343	-		LRK53_RS06005	0.45	-1.3
1,386,343	-		LRK53_RS06005	0.45	-0.8
1,386,343	-		LRK53_RS06005	0.45	-0.5
1,386,360	+		LRK53_RS06005	0.46	+1.1
1,386,360	+		LRK53_RS06005	0.46	-2.3
1,386,361	-		LRK53_RS06005	0.46	-0.5
1,386,408	+		LRK53_RS06005	0.48	-0.9
1,386,408	+		LRK53_RS06005	0.48	+1.1
1,386,408	+		LRK53_RS06005	0.48	+2.6
1,386,408	+		LRK53_RS06005	0.48	+1.1
1,386,408	+		LRK53_RS06005	0.48	-1.8
1,386,408	+		LRK53_RS06005	0.48	+1.1
1,386,409	-		LRK53_RS06005	0.48	-0.9
1,386,409	-		LRK53_RS06005	0.48	+0.3
1,386,409	-		LRK53_RS06005	0.48	-1.8
1,386,409	-		LRK53_RS06005	0.48	-0.9
1,386,409	-		LRK53_RS06005	0.48	-1.3
1,386,416	+		LRK53_RS06005	0.49	+0.5
1,386,416	+		LRK53_RS06005	0.49	-0.9
1,386,416	+		LRK53_RS06005	0.49	-0.9
1,386,416	+		LRK53_RS06005	0.49	-0.5
1,386,417	-		LRK53_RS06005	0.49	-2.8
1,386,417	-		LRK53_RS06005	0.49	-1.3
1,386,417	-		LRK53_RS06005	0.49	-0.9
1,386,417	-		LRK53_RS06005	0.49	-2.8