Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05515

Experiment: defined media with 20AA_mix

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with 20AA_mix
1,285,313	+		LRK53_RS05510	0.28	-0.5
1,285,313	+		LRK53_RS05510	0.28	-1.2
1,285,313	+		LRK53_RS05510	0.28	-0.5
1,285,313	+		LRK53_RS05510	0.28	-1.7
1,285,313	+		LRK53_RS05510	0.28	-1.8
1,285,313	+		LRK53_RS05510	0.28	+1.1
1,285,313	+		LRK53_RS05510	0.28	+0.1
1,285,313	+		LRK53_RS05510	0.28	-0.9
1,285,313	+		LRK53_RS05510	0.28	+1.1
1,285,313	+		LRK53_RS05510	0.28	-1.5
1,285,313	+		LRK53_RS05510	0.28	+0.1
1,285,313	+		LRK53_RS05510	0.28	-0.3
1,285,313	+		LRK53_RS05510	0.28	+0.5
1,285,313	+		LRK53_RS05510	0.28	-0.5
1,285,313	+		LRK53_RS05510	0.28	+0.5
1,285,313	+		LRK53_RS05510	0.28	-0.9
1,285,313	+		LRK53_RS05510	0.28	-1.1
1,285,313	+		LRK53_RS05510	0.28	-0.1
1,285,313	+		LRK53_RS05510	0.28	-0.5
1,285,313	+		LRK53_RS05510	0.28	-0.9
1,285,313	+		LRK53_RS05510	0.28	-1.0
1,285,313	+		LRK53_RS05510	0.28	-1.1
1,285,313	+		LRK53_RS05510	0.28	-1.5
1,285,313	+		LRK53_RS05510	0.28	-1.4
1,285,313	+		LRK53_RS05510	0.28	-1.2
1,285,314	-		LRK53_RS05510	0.28	-1.2
1,285,314	-		LRK53_RS05510	0.28	-0.4
1,285,314	-		LRK53_RS05510	0.28	-2.0
1,285,314	-		LRK53_RS05510	0.28	-1.0
1,285,314	-		LRK53_RS05510	0.28	-1.4
1,285,314	-		LRK53_RS05510	0.28	-0.1
1,285,314	-		LRK53_RS05510	0.28	-1.5
1,285,314	-		LRK53_RS05510	0.28	-0.9
1,285,314	-		LRK53_RS05510	0.28	-1.2
1,285,314	-		LRK53_RS05510	0.28	+0.7
1,285,314	-		LRK53_RS05510	0.28	+0.1
1,285,314	-		LRK53_RS05510	0.28	+0.5
1,285,314	-		LRK53_RS05510	0.28	+2.1
1,285,314	-		LRK53_RS05510	0.28	-0.9
1,285,314	-		LRK53_RS05510	0.28	-1.2
1,285,314	-		LRK53_RS05510	0.28	-1.2
1,285,314	-		LRK53_RS05510	0.28	-1.2
1,285,314	-		LRK53_RS05510	0.28	-0.2
1,285,314	-		LRK53_RS05510	0.28	-0.5
1,285,314	-		LRK53_RS05510	0.28	-0.5
1,285,314	-		LRK53_RS05510	0.28	-0.5
1,285,315	+		LRK53_RS05510	0.28	+0.1
1,285,315	+		LRK53_RS05510	0.28	-0.9
1,285,315	+		LRK53_RS05510	0.28	-0.2
1,285,315	+		LRK53_RS05510	0.28	+0.5
1,285,315	+		LRK53_RS05510	0.28	-0.1
1,285,315	+		LRK53_RS05510	0.28	-0.5
1,285,315	+		LRK53_RS05510	0.28	-1.5
1,285,315	+		LRK53_RS05510	0.28	-0.7
1,285,315	+		LRK53_RS05510	0.28	-2.7
1,285,315	+		LRK53_RS05510	0.28	+0.5
1,285,315	+		LRK53_RS05510	0.28	+1.1
1,285,316	-		LRK53_RS05510	0.28	-0.8
1,285,316	-		LRK53_RS05510	0.28	-1.5
1,285,316	-		LRK53_RS05510	0.28	+1.1
1,285,316	-		LRK53_RS05510	0.28	-1.5
1,285,316	-		LRK53_RS05510	0.28	-1.1
1,285,316	-		LRK53_RS05510	0.28	-0.3
1,285,316	-		LRK53_RS05510	0.28	-1.6
1,285,316	-		LRK53_RS05510	0.28	-0.2
1,285,316	-		LRK53_RS05510	0.28	-1.2
1,285,316	-		LRK53_RS05510	0.28	-1.2
1,285,486	+		LRK53_RS05510	0.41	-0.9
1,285,487	-		LRK53_RS05510	0.41	-0.2
1,285,487	-		LRK53_RS05510	0.41	-0.4
1,285,487	-		LRK53_RS05510	0.41	+1.1
1,285,579	+		LRK53_RS05510	0.48	-1.2
1,285,579	+		LRK53_RS05510	0.48	-2.1
1,285,579	+		LRK53_RS05510	0.48	+0.5
1,285,579	+		LRK53_RS05510	0.48	-1.3
1,285,579	+		LRK53_RS05510	0.48	-0.5
1,285,579	+		LRK53_RS05510	0.48	+0.6
1,285,579	+		LRK53_RS05510	0.48	-0.8
1,285,580	-		LRK53_RS05510	0.48	-0.5
1,285,580	-		LRK53_RS05510	0.48	+0.5
1,285,580	-		LRK53_RS05510	0.48	-0.9
1,285,741	+		LRK53_RS05510	0.60	-0.5
1,285,742	-		LRK53_RS05510	0.60	-0.2
1,285,762	+		LRK53_RS05510	0.62	-1.6
1,285,762	+		LRK53_RS05510	0.62	+0.1
1,285,763	-		LRK53_RS05510	0.62	-1.5
1,286,008	+		LRK53_RS05510	0.81	-1.1
1,286,009	-		LRK53_RS05510	0.81	-1.7
1,286,009	-		LRK53_RS05510	0.81	-1.7
1,286,009	-		LRK53_RS05510	0.81	-1.5
1,286,017	+		LRK53_RS05510	0.81	-0.9
1,286,017	+		LRK53_RS05510	0.81	-1.8
1,286,017	+		LRK53_RS05510	0.81	-0.2
1,286,017	+		LRK53_RS05510	0.81	-0.9
1,286,017	+		LRK53_RS05510	0.81	+0.1
1,286,017	+		LRK53_RS05510	0.81	-1.8
1,286,017	+		LRK53_RS05510	0.81	-1.1
1,286,017	+		LRK53_RS05510	0.81	+0.1
1,286,018	-		LRK53_RS05510	0.82	+2.1
1,286,018	-		LRK53_RS05510	0.82	-0.5
1,286,018	-		LRK53_RS05510	0.82	+0.1
1,286,018	-		LRK53_RS05510	0.82	+0.1
1,286,018	-		LRK53_RS05510	0.82	-0.2
1,286,018	-		LRK53_RS05510	0.82	-0.5
1,286,018	-		LRK53_RS05510	0.82	+0.1
1,286,018	-		LRK53_RS05510	0.82	-0.7
1,286,018	-		LRK53_RS05510	0.82	-0.1
1,286,089	-		LRK53_RS05510	0.87	-0.5
1,286,203	+				+0.1
1,286,203	+				-0.2
1,286,204	-				-0.2
1,286,447	+		LRK53_RS05515	0.15	-0.2
1,286,447	+		LRK53_RS05515	0.15	+1.5
1,286,447	+		LRK53_RS05515	0.15	-1.2
1,286,447	+		LRK53_RS05515	0.15	-0.4
1,286,447	+		LRK53_RS05515	0.15	-0.7
1,286,448	-		LRK53_RS05515	0.15	+1.1
1,286,448	-		LRK53_RS05515	0.15	-1.2
1,286,511	-		LRK53_RS05515	0.20	+0.1
1,286,511	-		LRK53_RS05515	0.20	-1.5
1,286,640	+		LRK53_RS05515	0.30	+1.1
1,286,641	-		LRK53_RS05515	0.30	-2.7
1,286,641	-		LRK53_RS05515	0.30	-1.0
1,286,642	+		LRK53_RS05515	0.31	+1.1
1,286,642	+		LRK53_RS05515	0.31	+0.1
1,286,642	+		LRK53_RS05515	0.31	-2.6
1,286,642	+		LRK53_RS05515	0.31	-0.5
1,286,642	+		LRK53_RS05515	0.31	+0.6
1,286,642	+		LRK53_RS05515	0.31	-1.1
1,286,642	+		LRK53_RS05515	0.31	-0.5
1,286,642	+		LRK53_RS05515	0.31	-2.4
1,286,642	+		LRK53_RS05515	0.31	-1.8
1,286,642	+		LRK53_RS05515	0.31	+1.1
1,286,642	+		LRK53_RS05515	0.31	-1.2
1,286,642	+		LRK53_RS05515	0.31	-0.8
1,286,642	+		LRK53_RS05515	0.31	-2.2
1,286,642	+		LRK53_RS05515	0.31	+0.1
1,286,642	+		LRK53_RS05515	0.31	-1.5
1,286,642	+		LRK53_RS05515	0.31	+1.4
1,286,642	+		LRK53_RS05515	0.31	+1.1
1,286,642	+		LRK53_RS05515	0.31	-1.7
1,286,642	+		LRK53_RS05515	0.31	+0.4
1,286,642	+		LRK53_RS05515	0.31	-0.4
1,286,642	+		LRK53_RS05515	0.31	-1.0
1,286,642	+		LRK53_RS05515	0.31	+1.1
1,286,642	+		LRK53_RS05515	0.31	-0.1
1,286,642	+		LRK53_RS05515	0.31	-0.3
1,286,642	+		LRK53_RS05515	0.31	-2.1
1,286,642	+		LRK53_RS05515	0.31	-0.9
1,286,643	-		LRK53_RS05515	0.31	-0.9
1,286,643	-		LRK53_RS05515	0.31	-0.5
1,286,643	-		LRK53_RS05515	0.31	-0.2
1,286,643	-		LRK53_RS05515	0.31	-0.5
1,286,643	-		LRK53_RS05515	0.31	-2.4
1,286,643	-		LRK53_RS05515	0.31	+1.1
1,286,643	-		LRK53_RS05515	0.31	+0.1
1,286,643	-		LRK53_RS05515	0.31	+0.5
1,286,643	-		LRK53_RS05515	0.31	+1.5
1,286,643	-		LRK53_RS05515	0.31	+1.1
1,286,643	-		LRK53_RS05515	0.31	+2.1
1,286,643	-		LRK53_RS05515	0.31	+2.4
1,286,643	-		LRK53_RS05515	0.31	+0.1
1,286,643	-		LRK53_RS05515	0.31	-0.9
1,286,643	-		LRK53_RS05515	0.31	-0.1
1,286,643	-		LRK53_RS05515	0.31	-2.9
1,286,643	-		LRK53_RS05515	0.31	-0.9
1,286,643	-		LRK53_RS05515	0.31	+2.1
1,286,643	-		LRK53_RS05515	0.31	+0.1
1,286,643	-		LRK53_RS05515	0.31	+1.1
1,286,643	-		LRK53_RS05515	0.31	-0.6
1,286,643	-		LRK53_RS05515	0.31	-0.5
1,286,643	-		LRK53_RS05515	0.31	-1.9
1,286,668	+		LRK53_RS05515	0.33	-1.5
1,286,669	-		LRK53_RS05515	0.33	-1.2
1,286,669	-		LRK53_RS05515	0.33	-1.2
1,286,669	-		LRK53_RS05515	0.33	-0.7
1,286,766	+		LRK53_RS05515	0.41	-0.5
1,286,767	-		LRK53_RS05515	0.41	+0.5
1,286,825	+		LRK53_RS05515	0.45	-0.1
1,286,825	+		LRK53_RS05515	0.45	-1.7
1,286,825	+		LRK53_RS05515	0.45	+1.1
1,286,825	+		LRK53_RS05515	0.45	-1.1
1,286,826	-		LRK53_RS05515	0.45	+0.1
1,286,909	+		LRK53_RS05515	0.52	+1.1
1,286,909	+		LRK53_RS05515	0.52	-1.6
1,286,909	+		LRK53_RS05515	0.52	-0.2
1,286,909	+		LRK53_RS05515	0.52	-0.5
1,286,909	+		LRK53_RS05515	0.52	+0.1
1,286,909	+		LRK53_RS05515	0.52	-0.7
1,286,909	+		LRK53_RS05515	0.52	+1.1
1,286,909	+		LRK53_RS05515	0.52	-1.5
1,286,910	-		LRK53_RS05515	0.52	-0.5
1,286,910	-		LRK53_RS05515	0.52	+0.3
1,286,910	-		LRK53_RS05515	0.52	-1.7
1,286,915	+		LRK53_RS05515	0.53	-0.5
1,286,915	+		LRK53_RS05515	0.53	-1.9
1,286,916	-		LRK53_RS05515	0.53	-0.5
1,286,916	-		LRK53_RS05515	0.53	+0.3
1,286,916	-		LRK53_RS05515	0.53	-0.3
1,286,916	-		LRK53_RS05515	0.53	-1.4
1,286,966	+		LRK53_RS05515	0.57	+0.3
1,286,966	+		LRK53_RS05515	0.57	-0.2
1,286,967	-		LRK53_RS05515	0.57	-1.2
1,286,967	-		LRK53_RS05515	0.57	-0.8
1,286,967	-		LRK53_RS05515	0.57	-0.9
1,286,967	-		LRK53_RS05515	0.57	+0.1
1,286,967	-		LRK53_RS05515	0.57	+1.1
1,286,967	-		LRK53_RS05515	0.57	+0.1
1,286,967	-		LRK53_RS05515	0.57	+0.5
1,286,967	-		LRK53_RS05515	0.57	-0.9
1,287,029	+		LRK53_RS05515	0.62	+0.3
1,287,029	+		LRK53_RS05515	0.62	-0.1
1,287,029	+		LRK53_RS05515	0.62	+2.1
1,287,029	+		LRK53_RS05515	0.62	+1.4
1,287,029	+		LRK53_RS05515	0.62	-1.2
1,287,029	+		LRK53_RS05515	0.62	-0.5
1,287,030	-		LRK53_RS05515	0.62	+0.6
1,287,030	-		LRK53_RS05515	0.62	-1.0
1,287,030	-		LRK53_RS05515	0.62	+1.1
1,287,030	-		LRK53_RS05515	0.62	+0.1
1,287,104	+		LRK53_RS05515	0.68	-0.5
1,287,104	+		LRK53_RS05515	0.68	-1.4
1,287,104	+		LRK53_RS05515	0.68	-1.7
1,287,104	+		LRK53_RS05515	0.68	-2.5
1,287,104	+		LRK53_RS05515	0.68	-2.2
1,287,105	-		LRK53_RS05515	0.68	-2.2
1,287,105	-		LRK53_RS05515	0.68	+1.1
1,287,105	-		LRK53_RS05515	0.68	+1.1
1,287,105	-		LRK53_RS05515	0.68	-1.0
1,287,105	-		LRK53_RS05515	0.68	-0.7
1,287,105	-		LRK53_RS05515	0.68	-0.5
1,287,105	-		LRK53_RS05515	0.68	+1.1
1,287,272	+		LRK53_RS05515	0.81	-0.4
1,287,272	+		LRK53_RS05515	0.81	-0.3
1,287,272	+		LRK53_RS05515	0.81	+2.1
1,287,272	+		LRK53_RS05515	0.81	-1.7
1,287,272	+		LRK53_RS05515	0.81	-0.2
1,287,272	+		LRK53_RS05515	0.81	-1.7
1,287,272	+		LRK53_RS05515	0.81	+1.1
1,287,272	+		LRK53_RS05515	0.81	+1.1
1,287,272	+		LRK53_RS05515	0.81	+0.1
1,287,272	+		LRK53_RS05515	0.81	-0.5
1,287,273	-		LRK53_RS05515	0.81	-0.8
1,287,273	-		LRK53_RS05515	0.81	-0.5
1,287,273	-		LRK53_RS05515	0.81	-0.5
1,287,392	+				-0.4
1,287,392	+				-0.5
1,287,392	+				+0.1
1,287,392	+				-2.1
1,287,392	+				+0.1
1,287,392	+				+0.1
1,287,392	+				-0.5
1,287,392	+				-0.9
1,287,392	+				+1.1
1,287,392	+				-0.5
1,287,392	+				-0.5
1,287,392	+				-0.9
1,287,393	-				-1.5
1,287,393	-				-2.0
1,287,393	-				-1.9
1,287,393	-				-2.1
1,287,393	-				-0.3
1,287,393	-				-0.5
1,287,393	-				-0.7
1,287,393	-				-0.7
1,287,393	-				-1.8
1,287,393	-				-1.7
1,287,393	-				+0.1
1,287,393	-				-1.1
1,287,676	+				+0.5
1,287,676	+				+0.1
1,287,676	+				-0.6
1,287,676	+				-1.4
1,287,676	+				-1.7
1,287,676	+				-0.9
1,287,676	+				-1.6
1,287,676	+				-0.9
1,287,676	+				+2.1
1,287,676	+				-0.9
1,287,676	+				-0.5
1,287,676	+				-0.5
1,287,676	+				+0.1
1,287,676	+				+0.1
1,287,676	+				+1.1
1,287,676	+				+0.1
1,287,676	+				-0.1
1,287,676	+				+0.6
1,287,676	+				-0.8
1,287,676	+				+1.1
1,287,676	+				+1.1
1,287,676	+				-2.2
1,287,677	-				+0.1
1,287,677	-				+0.1
1,287,677	-				+0.9
1,287,677	-				+1.5
1,287,677	-				-0.6
1,287,677	-				+0.1
1,287,677	-				-1.0
1,287,677	-				-1.7
1,287,677	-				-1.1
1,287,677	-				+0.1
1,287,677	-				-0.9
1,287,677	-				-0.1
1,287,679	+				+0.2
1,287,679	+				+1.1
1,287,679	+				-0.1
1,287,680	-				-1.2
1,287,680	-				+0.3
1,287,680	-				+0.8
1,287,680	-				-1.4
1,287,907	+		LRK53_RS05520	0.18	-0.2
1,287,908	-		LRK53_RS05520	0.18	-0.0
1,287,908	-		LRK53_RS05520	0.18	-1.2
1,287,964	+		LRK53_RS05520	0.23	-1.7
1,287,964	+		LRK53_RS05520	0.23	+0.3
1,287,964	+		LRK53_RS05520	0.23	+0.1
1,287,964	+		LRK53_RS05520	0.23	+0.5
1,287,964	+		LRK53_RS05520	0.23	+0.1
1,287,965	-		LRK53_RS05520	0.23	-1.5
1,287,965	-		LRK53_RS05520	0.23	-0.2
1,287,965	-		LRK53_RS05520	0.23	-1.1
1,287,965	-		LRK53_RS05520	0.23	-0.9
1,287,965	-		LRK53_RS05520	0.23	-1.9
1,287,965	-		LRK53_RS05520	0.23	-0.1
1,287,965	-		LRK53_RS05520	0.23	-1.5
1,288,036	+		LRK53_RS05520	0.28	-0.7
1,288,036	+		LRK53_RS05520	0.28	-0.5
1,288,037	-		LRK53_RS05520	0.28	-1.7
1,288,064	+		LRK53_RS05520	0.30	-1.2
1,288,065	-		LRK53_RS05520	0.30	-2.2
1,288,075	+		LRK53_RS05520	0.31	-0.5
1,288,075	+		LRK53_RS05520	0.31	-0.9
1,288,075	+		LRK53_RS05520	0.31	+0.1
1,288,075	+		LRK53_RS05520	0.31	+0.1
1,288,075	+		LRK53_RS05520	0.31	-1.7
1,288,076	-		LRK53_RS05520	0.31	-0.6
1,288,207	+		LRK53_RS05520	0.41	-0.9
1,288,255	+		LRK53_RS05520	0.45	-1.2
1,288,255	+		LRK53_RS05520	0.45	-0.7
1,288,256	-		LRK53_RS05520	0.45	+1.1
1,288,256	-		LRK53_RS05520	0.45	+0.7
1,288,256	-		LRK53_RS05520	0.45	-0.9
1,288,256	-		LRK53_RS05520	0.45	+1.1
1,288,463	-		LRK53_RS05520	0.61	+1.1
1,288,471	+		LRK53_RS05520	0.61	-0.3
1,288,471	+		LRK53_RS05520	0.61	-1.3
1,288,471	+		LRK53_RS05520	0.61	+0.5
1,288,472	-		LRK53_RS05520	0.61	-1.2