Strain Fitness in Escherichia coli ECRC98 around JDDGAC_16510

Experiment: WM_K30

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_K30
3,114,373	+				-3.3
3,114,430	-				-3.1
3,114,470	+				+0.4
3,114,471	-				-1.3
3,114,552	-				+1.5
3,114,552	-				-1.5
3,114,552	-				+0.2
3,114,554	-				-0.7
3,114,648	+				-0.5
3,114,649	-				+0.2
3,114,649	-				-1.3
3,114,654	+				+0.5
3,114,654	+				-0.6
3,114,655	-				+0.7
3,114,655	-				-2.2
3,114,655	-				+1.1
3,114,655	-				+0.4
3,114,773	+				-0.7
3,114,901	-	soxR	JDDGAC_16505	0.23	-0.1
3,114,936	+	soxR	JDDGAC_16505	0.31	-0.8
3,114,936	+	soxR	JDDGAC_16505	0.31	-0.1
3,114,937	-	soxR	JDDGAC_16505	0.31	-1.7
3,114,937	-	soxR	JDDGAC_16505	0.31	-0.4
3,115,000	+	soxR	JDDGAC_16505	0.45	-0.9
3,115,000	+	soxR	JDDGAC_16505	0.45	-1.8
3,115,001	-	soxR	JDDGAC_16505	0.45	+0.6
3,115,005	+	soxR	JDDGAC_16505	0.46	-0.6
3,115,005	+	soxR	JDDGAC_16505	0.46	-0.4
3,115,005	+	soxR	JDDGAC_16505	0.46	+0.6
3,115,005	+	soxR	JDDGAC_16505	0.46	-0.4
3,115,005	+	soxR	JDDGAC_16505	0.46	+1.1
3,115,005	+	soxR	JDDGAC_16505	0.46	+0.3
3,115,006	-	soxR	JDDGAC_16505	0.46	+0.9
3,115,006	-	soxR	JDDGAC_16505	0.46	+0.3
3,115,006	-	soxR	JDDGAC_16505	0.46	+1.4
3,115,006	-	soxR	JDDGAC_16505	0.46	+0.4
3,115,092	-	soxR	JDDGAC_16505	0.64	-0.9
3,115,111	-	soxR	JDDGAC_16505	0.68	-0.3
3,115,111	-	soxR	JDDGAC_16505	0.68	+0.7
3,115,112	+	soxR	JDDGAC_16505	0.69	-1.6
3,115,113	-	soxR	JDDGAC_16505	0.69	-0.6
3,115,113	-	soxR	JDDGAC_16505	0.69	-0.3
3,115,147	-	soxR	JDDGAC_16505	0.76	+2.5
3,115,291	-				-0.7
3,115,342	+				+1.1
3,115,343	-				+1.1
3,115,372	+				+0.9
3,115,394	-	soxS_A12S	JDDGAC_16510	0.16	-1.7
3,115,408	+	soxS_A12S	JDDGAC_16510	0.20	-0.0
3,115,522	-	soxS_A12S	JDDGAC_16510	0.55	-3.2
3,115,587	-	soxS_A12S	JDDGAC_16510	0.75	-3.7
3,115,665	-				-0.1
3,115,720	-				+0.5
3,115,864	-	pdeC	JDDGAC_16515	0.12	+1.1
3,115,864	-	pdeC	JDDGAC_16515	0.12	-1.1
3,115,864	-	pdeC	JDDGAC_16515	0.12	-0.8
3,115,953	+	pdeC	JDDGAC_16515	0.18	-1.7
3,115,954	-	pdeC	JDDGAC_16515	0.18	+0.7
3,115,974	-	pdeC	JDDGAC_16515	0.19	-0.2
3,116,109	-	pdeC	JDDGAC_16515	0.28	-0.0
3,116,152	-	pdeC	JDDGAC_16515	0.30	+1.1
3,116,179	-	pdeC	JDDGAC_16515	0.32	-0.7
3,116,211	-	pdeC	JDDGAC_16515	0.34	-1.5
3,116,235	+	pdeC	JDDGAC_16515	0.36	+1.2
3,116,235	+	pdeC	JDDGAC_16515	0.36	-0.0
3,116,246	+	pdeC	JDDGAC_16515	0.36	-1.7
3,116,263	+	pdeC	JDDGAC_16515	0.37	-2.0
3,116,263	+	pdeC	JDDGAC_16515	0.37	-0.5
3,116,293	-	pdeC	JDDGAC_16515	0.39	-0.4
3,116,311	+	pdeC	JDDGAC_16515	0.40	+0.4
3,116,312	-	pdeC	JDDGAC_16515	0.41	-0.1
3,116,339	-	pdeC	JDDGAC_16515	0.42	-0.2
3,116,396	+	pdeC	JDDGAC_16515	0.46	+0.1
3,116,405	-	pdeC	JDDGAC_16515	0.46	+0.5
3,116,453	+	pdeC	JDDGAC_16515	0.49	+0.3
3,116,527	-	pdeC	JDDGAC_16515	0.54	-0.5
3,116,548	+	pdeC	JDDGAC_16515	0.55	-0.0
3,116,549	-	pdeC	JDDGAC_16515	0.55	-0.0
3,116,562	-	pdeC	JDDGAC_16515	0.56	-1.0
3,116,617	+	pdeC	JDDGAC_16515	0.60	+0.4
3,116,617	+	pdeC	JDDGAC_16515	0.60	+0.7
3,116,618	-	pdeC	JDDGAC_16515	0.60	-0.6