Strain Fitness in Escherichia coli ECRC98 around JDDGAC_07485

Experiment: WM_K30

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_K30
1,299,497	-	ymdB	JDDGAC_07475	0.13	-1.9
1,299,497	-	ymdB	JDDGAC_07475	0.13	-0.6
1,299,497	-	ymdB	JDDGAC_07475	0.13	-3.4
1,299,497	-	ymdB	JDDGAC_07475	0.13	-0.4
1,299,499	-	ymdB	JDDGAC_07475	0.14	-0.4
1,299,528	-	ymdB	JDDGAC_07475	0.19	+0.5
1,299,583	+	ymdB	JDDGAC_07475	0.29	-0.5
1,299,584	-	ymdB	JDDGAC_07475	0.30	-0.0
1,299,620	+	ymdB	JDDGAC_07475	0.36	+0.5
1,299,620	+	ymdB	JDDGAC_07475	0.36	+1.8
1,299,620	+	ymdB	JDDGAC_07475	0.36	-2.3
1,299,622	+	ymdB	JDDGAC_07475	0.37	-0.3
1,299,622	+	ymdB	JDDGAC_07475	0.37	-1.5
1,299,623	-	ymdB	JDDGAC_07475	0.37	-1.9
1,299,658	+	ymdB	JDDGAC_07475	0.43	+0.5
1,299,735	-	ymdB	JDDGAC_07475	0.58	+0.3
1,299,759	-	ymdB	JDDGAC_07475	0.62	+1.7
1,299,960	-				-0.2
1,299,971	-				+1.3
1,299,971	-				+0.4
1,299,988	-				+0.3
1,299,994	-				-0.7
1,300,055	+				-0.2
1,300,056	-				+1.4
1,300,056	-				-0.4
1,300,059	+				+1.0
1,300,060	-				-2.0
1,300,062	-				-0.1
1,300,169	+		JDDGAC_07480	0.37	-3.8
1,300,311	+		JDDGAC_07480	0.82	+1.1
1,300,387	+				+1.4
1,300,465	+				+0.3
1,300,621	-	csgC	JDDGAC_07485	0.41	-1.6
1,300,746	-	csgC	JDDGAC_07485	0.78	-2.0
1,300,750	-	csgC	JDDGAC_07485	0.79	+0.1
1,300,865	-				+0.7
1,300,876	-				-1.5
1,300,876	-				+0.1
1,300,876	-				-3.0
1,300,879	-				-1.4
1,300,988	-	csgA	JDDGAC_07490	0.24	-1.2
1,300,997	-	csgA	JDDGAC_07490	0.26	-0.5
1,301,039	-	csgA	JDDGAC_07490	0.35	-0.1
1,301,125	+	csgA	JDDGAC_07490	0.54	-1.8
1,301,126	-	csgA	JDDGAC_07490	0.54	+2.1
1,301,174	-	csgA	JDDGAC_07490	0.65	+0.6
1,301,194	+	csgA	JDDGAC_07490	0.69	-0.1
1,301,298	-				+0.6
1,301,338	-				-0.8
1,301,422	-	csgB	JDDGAC_07495	0.10	+0.0
1,301,446	+	csgB	JDDGAC_07495	0.15	-3.0
1,301,447	-	csgB	JDDGAC_07495	0.16	+0.8
1,301,447	-	csgB	JDDGAC_07495	0.16	-0.1
1,301,447	-	csgB	JDDGAC_07495	0.16	-0.2
1,301,557	+	csgB	JDDGAC_07495	0.40	+0.9
1,301,557	+	csgB	JDDGAC_07495	0.40	+0.1
1,301,557	+	csgB	JDDGAC_07495	0.40	-0.2
1,301,558	-	csgB	JDDGAC_07495	0.40	+0.8
1,301,558	-	csgB	JDDGAC_07495	0.40	+0.1
1,301,567	+	csgB	JDDGAC_07495	0.42	-2.4
1,301,570	-	csgB	JDDGAC_07495	0.43	+0.9
1,301,666	+	csgB	JDDGAC_07495	0.64	-0.4
1,301,667	-	csgB	JDDGAC_07495	0.64	-0.5
1,301,667	-	csgB	JDDGAC_07495	0.64	+0.6