Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17075

Experiment: R2A_PIPES no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES no stress control
3,753,095	+		LRK53_RS17070	0.68	-0.9
3,753,096	-		LRK53_RS17070	0.68	-0.5
3,753,380	+		LRK53_RS17070	0.77	-0.7
3,753,380	+		LRK53_RS17070	0.77	+2.1
3,753,380	+		LRK53_RS17070	0.77	-0.5
3,753,380	+		LRK53_RS17070	0.77	-1.5
3,753,381	-		LRK53_RS17070	0.77	-1.4
3,753,381	-		LRK53_RS17070	0.77	-0.5
3,753,381	-		LRK53_RS17070	0.77	+1.1
3,753,381	-		LRK53_RS17070	0.77	-0.5
3,753,381	-		LRK53_RS17070	0.77	+1.1
3,753,381	-		LRK53_RS17070	0.77	+1.1
3,753,381	-		LRK53_RS17070	0.77	-1.5
3,753,381	-		LRK53_RS17070	0.77	+1.1
3,753,383	+		LRK53_RS17070	0.77	-1.1
3,753,383	+		LRK53_RS17070	0.77	+0.7
3,753,383	+		LRK53_RS17070	0.77	-0.8
3,753,383	+		LRK53_RS17070	0.77	-0.5
3,753,384	-		LRK53_RS17070	0.77	-0.9
3,753,384	-		LRK53_RS17070	0.77	+0.5
3,753,384	-		LRK53_RS17070	0.77	+0.1
3,753,384	-		LRK53_RS17070	0.77	+0.1
3,753,384	-		LRK53_RS17070	0.77	+0.1
3,753,384	-		LRK53_RS17070	0.77	+0.1
3,753,384	-		LRK53_RS17070	0.77	+0.1
3,753,384	-		LRK53_RS17070	0.77	+0.1
3,753,384	-		LRK53_RS17070	0.77	-0.2
3,753,404	+		LRK53_RS17070	0.78	-1.1
3,753,509	+		LRK53_RS17070	0.81	-2.5
3,753,509	+		LRK53_RS17070	0.81	+0.4
3,753,510	-		LRK53_RS17070	0.81	+1.1
3,753,638	+		LRK53_RS17070	0.85	-0.5
3,753,638	+		LRK53_RS17070	0.85	+0.1
3,753,638	+		LRK53_RS17070	0.85	-0.5
3,753,639	-		LRK53_RS17070	0.85	+0.1
3,753,639	-		LRK53_RS17070	0.85	-1.7
3,753,644	+		LRK53_RS17070	0.85	+1.1
3,753,644	+		LRK53_RS17070	0.85	-0.5
3,753,644	+		LRK53_RS17070	0.85	-1.4
3,753,645	-		LRK53_RS17070	0.85	+0.5
3,753,645	-		LRK53_RS17070	0.85	-0.9
3,753,645	-		LRK53_RS17070	0.85	+0.1
3,753,645	-		LRK53_RS17070	0.85	+0.1
3,753,645	-		LRK53_RS17070	0.85	+0.1
3,753,645	-		LRK53_RS17070	0.85	+0.1
3,753,645	-		LRK53_RS17070	0.85	+0.5
3,753,645	-		LRK53_RS17070	0.85	-0.5
3,753,746	+		LRK53_RS17070	0.89	+0.1
3,753,746	+		LRK53_RS17070	0.89	-1.7
3,753,746	+		LRK53_RS17070	0.89	-0.3
3,753,746	+		LRK53_RS17070	0.89	-1.1
3,753,747	-		LRK53_RS17070	0.89	-1.9
3,753,747	-		LRK53_RS17070	0.89	+0.2
3,753,747	-		LRK53_RS17070	0.89	-0.5
3,753,794	+				-1.2
3,753,794	+				-0.5
3,753,794	+				+0.3
3,753,794	+				-0.7
3,753,795	-				+0.1
3,753,795	-				-0.3
3,753,888	+				-0.3
3,753,889	-				+0.5
3,753,941	+				+1.1
3,753,941	+				-0.3
3,753,941	+				+0.2
3,754,177	+				-1.1
3,754,177	+				-0.9
3,754,178	-				+1.3
3,754,178	-				+0.5
3,754,178	-				-1.2
3,754,178	-				-1.3
3,754,246	+		LRK53_RS17075	0.13	-0.5
3,754,342	+		LRK53_RS17075	0.22	-0.5
3,754,342	+		LRK53_RS17075	0.22	-2.8
3,754,342	+		LRK53_RS17075	0.22	-1.5
3,754,342	+		LRK53_RS17075	0.22	-1.5
3,754,342	+		LRK53_RS17075	0.22	-0.9
3,754,342	+		LRK53_RS17075	0.22	-2.3
3,754,342	+		LRK53_RS17075	0.22	-0.5
3,754,342	+		LRK53_RS17075	0.22	+1.1
3,754,342	+		LRK53_RS17075	0.22	+1.1
3,754,342	+		LRK53_RS17075	0.22	-2.4
3,754,342	+		LRK53_RS17075	0.22	-1.2
3,754,342	+		LRK53_RS17075	0.22	-2.1
3,754,342	+		LRK53_RS17075	0.22	-1.3
3,754,342	+		LRK53_RS17075	0.22	+0.1
3,754,342	+		LRK53_RS17075	0.22	-1.5
3,754,342	+		LRK53_RS17075	0.22	-0.3
3,754,342	+		LRK53_RS17075	0.22	-1.3
3,754,342	+		LRK53_RS17075	0.22	+0.7
3,754,342	+		LRK53_RS17075	0.22	-0.7
3,754,342	+		LRK53_RS17075	0.22	-1.5
3,754,342	+		LRK53_RS17075	0.22	-1.7
3,754,342	+		LRK53_RS17075	0.22	-1.3
3,754,342	+		LRK53_RS17075	0.22	-1.3
3,754,342	+		LRK53_RS17075	0.22	-1.7
3,754,343	-		LRK53_RS17075	0.22	-0.9
3,754,343	-		LRK53_RS17075	0.22	+0.1
3,754,343	-		LRK53_RS17075	0.22	-0.3
3,754,343	-		LRK53_RS17075	0.22	-1.1
3,754,343	-		LRK53_RS17075	0.22	+2.1
3,754,343	-		LRK53_RS17075	0.22	-0.7
3,754,343	-		LRK53_RS17075	0.22	-0.3
3,754,343	-		LRK53_RS17075	0.22	-0.5
3,754,343	-		LRK53_RS17075	0.22	-0.5
3,754,343	-		LRK53_RS17075	0.22	-0.9
3,754,343	-		LRK53_RS17075	0.22	+0.5
3,754,343	-		LRK53_RS17075	0.22	-1.3
3,754,343	-		LRK53_RS17075	0.22	+0.1
3,754,343	-		LRK53_RS17075	0.22	-1.3
3,754,343	-		LRK53_RS17075	0.22	-1.5
3,754,343	-		LRK53_RS17075	0.22	-0.5
3,754,343	-		LRK53_RS17075	0.22	-1.1
3,754,343	-		LRK53_RS17075	0.22	-0.5
3,754,343	-		LRK53_RS17075	0.22	-0.5
3,754,343	-		LRK53_RS17075	0.22	+0.1
3,754,800	+		LRK53_RS17075	0.63	-0.3
3,754,879	+		LRK53_RS17075	0.70	+1.1
3,755,258	+				-0.9
3,755,258	+				+0.1
3,755,258	+				+2.1
3,755,258	+				-1.4
3,755,258	+				+0.6
3,755,258	+				-1.4
3,755,258	+				-0.3
3,755,258	+				-3.3
3,755,258	+				+2.1
3,755,258	+				-1.5
3,755,259	-				+0.1
3,755,259	-				-0.5
3,755,259	-				+1.1
3,755,259	-				-1.3
3,755,259	-				+0.1
3,755,259	-				-1.9
3,755,448	-		LRK53_RS17080	0.11	+1.1
3,755,448	-		LRK53_RS17080	0.11	+0.1
3,755,448	-		LRK53_RS17080	0.11	+0.3
3,755,477	+		LRK53_RS17080	0.12	-1.1
3,755,478	-		LRK53_RS17080	0.12	-0.5
3,755,478	-		LRK53_RS17080	0.12	-0.9
3,755,486	+		LRK53_RS17080	0.13	-1.9
3,755,487	-		LRK53_RS17080	0.13	-0.2
3,755,487	-		LRK53_RS17080	0.13	-0.9
3,755,498	+		LRK53_RS17080	0.14	-0.3
3,755,498	+		LRK53_RS17080	0.14	+0.1
3,755,498	+		LRK53_RS17080	0.14	-0.6
3,755,498	+		LRK53_RS17080	0.14	+0.1
3,755,498	+		LRK53_RS17080	0.14	-0.3
3,755,498	+		LRK53_RS17080	0.14	-0.3
3,755,498	+		LRK53_RS17080	0.14	-0.9
3,755,498	+		LRK53_RS17080	0.14	-0.6
3,755,498	+		LRK53_RS17080	0.14	-0.5
3,755,498	+		LRK53_RS17080	0.14	-1.3
3,755,499	-		LRK53_RS17080	0.14	-1.7
3,755,499	-		LRK53_RS17080	0.14	+0.1
3,755,499	-		LRK53_RS17080	0.14	-0.5
3,755,499	-		LRK53_RS17080	0.14	-0.5
3,755,595	+		LRK53_RS17080	0.19	-0.9
3,755,636	+		LRK53_RS17080	0.21	-1.3
3,755,637	-		LRK53_RS17080	0.21	+0.1
3,755,657	+		LRK53_RS17080	0.22	-0.1
3,755,657	+		LRK53_RS17080	0.22	+1.1
3,755,658	-		LRK53_RS17080	0.23	-1.1
3,755,658	-		LRK53_RS17080	0.23	-0.5
3,755,658	-		LRK53_RS17080	0.23	+1.1
3,755,658	-		LRK53_RS17080	0.23	-1.7