Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17045

Experiment: R2A_PIPES no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES no stress control
3,744,389	-		LRK53_RS17040	0.59	+1.7
3,744,427	+		LRK53_RS17040	0.62	+0.0
3,744,427	+		LRK53_RS17040	0.62	+1.1
3,744,610	+		LRK53_RS17040	0.76	-0.4
3,744,610	+		LRK53_RS17040	0.76	-1.8
3,744,610	+		LRK53_RS17040	0.76	+0.2
3,744,611	-		LRK53_RS17040	0.76	+0.1
3,744,611	-		LRK53_RS17040	0.76	+0.1
3,744,611	-		LRK53_RS17040	0.76	+0.3
3,744,611	-		LRK53_RS17040	0.76	-1.5
3,744,611	-		LRK53_RS17040	0.76	+2.7
3,744,667	+		LRK53_RS17040	0.80	-0.8
3,744,667	+		LRK53_RS17040	0.80	-0.3
3,744,667	+		LRK53_RS17040	0.80	+0.5
3,744,667	+		LRK53_RS17040	0.80	+0.7
3,744,667	+		LRK53_RS17040	0.80	-1.3
3,744,667	+		LRK53_RS17040	0.80	-0.9
3,744,668	-		LRK53_RS17040	0.80	-0.5
3,744,668	-		LRK53_RS17040	0.80	+1.1
3,744,668	-		LRK53_RS17040	0.80	+1.1
3,744,668	-		LRK53_RS17040	0.80	-1.1
3,744,668	-		LRK53_RS17040	0.80	+1.1
3,744,668	-		LRK53_RS17040	0.80	-1.3
3,744,703	-		LRK53_RS17040	0.83	+1.1
3,744,703	-		LRK53_RS17040	0.83	+0.1
3,744,775	+		LRK53_RS17040	0.88	-0.3
3,744,776	-		LRK53_RS17040	0.88	+0.7
3,744,799	+				-0.7
3,744,799	+				-0.2
3,744,799	+				-1.3
3,744,799	+				+1.1
3,744,800	-				-1.7
3,744,800	-				+0.1
3,744,800	-				-2.2
3,744,800	-				+0.5
3,744,800	-				+1.1
3,744,800	-				-1.6
3,744,847	+				+0.5
3,744,848	-				-0.3
3,745,044	+				+1.1
3,745,044	+				+1.1
3,745,044	+				-0.3
3,745,044	+				-1.7
3,745,044	+				+0.2
3,745,044	+				-0.8
3,745,044	+				-0.9
3,745,044	+				-1.9
3,745,044	+				-0.5
3,745,045	-				-0.5
3,745,045	-				+0.1
3,745,045	-				-0.4
3,745,045	-				-1.5
3,745,045	-				+0.3
3,745,045	-				-1.2
3,745,045	-				-0.6
3,745,045	-				-0.1
3,745,045	-				+0.1
3,745,212	+		LRK53_RS17045	0.24	-0.5
3,745,212	+		LRK53_RS17045	0.24	+0.7
3,745,212	+		LRK53_RS17045	0.24	-0.3
3,745,212	+		LRK53_RS17045	0.24	-0.7
3,745,213	-		LRK53_RS17045	0.24	-1.2
3,745,213	-		LRK53_RS17045	0.24	+0.1
3,745,213	-		LRK53_RS17045	0.24	+1.1
3,745,242	+		LRK53_RS17045	0.26	-0.5
3,745,242	+		LRK53_RS17045	0.26	-0.6
3,745,242	+		LRK53_RS17045	0.26	+0.5
3,745,242	+		LRK53_RS17045	0.26	-1.3
3,745,242	+		LRK53_RS17045	0.26	-1.7
3,745,242	+		LRK53_RS17045	0.26	+0.7
3,745,242	+		LRK53_RS17045	0.26	-0.3
3,745,242	+		LRK53_RS17045	0.26	-2.3
3,745,242	+		LRK53_RS17045	0.26	+0.5
3,745,242	+		LRK53_RS17045	0.26	-0.7
3,745,242	+		LRK53_RS17045	0.26	-1.3
3,745,243	-		LRK53_RS17045	0.26	-0.5
3,745,243	-		LRK53_RS17045	0.26	-0.4
3,745,243	-		LRK53_RS17045	0.26	-1.0
3,745,243	-		LRK53_RS17045	0.26	-1.0
3,745,243	-		LRK53_RS17045	0.26	-2.0
3,745,243	-		LRK53_RS17045	0.26	+0.4
3,745,243	-		LRK53_RS17045	0.26	-0.9
3,745,243	-		LRK53_RS17045	0.26	-0.9
3,745,725	+		LRK53_RS17045	0.66	-2.1
3,745,725	+		LRK53_RS17045	0.66	-0.5
3,745,725	+		LRK53_RS17045	0.66	-0.5
3,745,725	+		LRK53_RS17045	0.66	-0.5
3,745,725	+		LRK53_RS17045	0.66	-1.7
3,745,725	+		LRK53_RS17045	0.66	-0.9
3,745,725	+		LRK53_RS17045	0.66	+1.1
3,745,725	+		LRK53_RS17045	0.66	-1.9
3,745,725	+		LRK53_RS17045	0.66	-0.9
3,745,726	-		LRK53_RS17045	0.66	-1.9
3,745,726	-		LRK53_RS17045	0.66	-0.8
3,745,726	-		LRK53_RS17045	0.66	-0.5
3,745,726	-		LRK53_RS17045	0.66	-1.0
3,745,726	-		LRK53_RS17045	0.66	-0.5
3,745,815	+		LRK53_RS17045	0.74	+1.1
3,745,815	+		LRK53_RS17045	0.74	-1.2
3,745,815	+		LRK53_RS17045	0.74	-1.3
3,745,815	+		LRK53_RS17045	0.74	-1.3
3,745,815	+		LRK53_RS17045	0.74	-2.1
3,745,815	+		LRK53_RS17045	0.74	+0.1
3,745,815	+		LRK53_RS17045	0.74	-0.3
3,745,815	+		LRK53_RS17045	0.74	-2.6
3,745,815	+		LRK53_RS17045	0.74	-1.4
3,745,815	+		LRK53_RS17045	0.74	-0.7
3,745,815	+		LRK53_RS17045	0.74	+1.1
3,745,815	+		LRK53_RS17045	0.74	-0.5
3,745,816	-		LRK53_RS17045	0.74	-2.5
3,745,816	-		LRK53_RS17045	0.74	-0.5
3,745,816	-		LRK53_RS17045	0.74	+0.1
3,745,816	-		LRK53_RS17045	0.74	+0.3
3,745,816	-		LRK53_RS17045	0.74	-0.7
3,745,816	-		LRK53_RS17045	0.74	-0.2
3,745,816	-		LRK53_RS17045	0.74	+1.1
3,745,816	-		LRK53_RS17045	0.74	-0.4
3,745,816	-		LRK53_RS17045	0.74	+1.1
3,745,816	-		LRK53_RS17045	0.74	-0.7
3,745,816	-		LRK53_RS17045	0.74	-2.8
3,745,816	-		LRK53_RS17045	0.74	-1.9
3,745,881	+		LRK53_RS17045	0.79	-0.9
3,745,905	+		LRK53_RS17045	0.81	-1.1
3,745,905	+		LRK53_RS17045	0.81	-2.3
3,745,905	+		LRK53_RS17045	0.81	-0.3
3,745,906	-		LRK53_RS17045	0.81	-0.5
3,745,906	-		LRK53_RS17045	0.81	-0.6
3,745,906	-		LRK53_RS17045	0.81	+1.1
3,745,906	-		LRK53_RS17045	0.81	-0.9
3,746,488	+				-0.8
3,746,488	+				+0.1
3,746,488	+				-2.3
3,746,488	+				-0.9
3,746,488	+				-1.1
3,746,488	+				-0.5
3,746,488	+				+1.5
3,746,488	+				-1.3
3,746,489	-				+0.5
3,746,489	-				+0.1
3,746,489	-				+0.1
3,746,489	-				-0.5
3,746,489	-				-1.3
3,746,489	-				-0.9
3,746,489	-				-0.5
3,746,489	-				-0.6
3,746,489	-				+1.1
3,746,489	-				-1.2
3,746,489	-				-0.5
3,746,489	-				-0.3
3,746,521	+				-0.2
3,746,572	+				-0.5
3,746,572	+				-0.5
3,746,572	+				-1.4
3,746,572	+				+0.1
3,746,572	+				+0.3
3,746,572	+				+1.1
3,746,572	+				-1.5
3,746,572	+				+0.3
3,746,573	-				-1.2
3,746,573	-				-1.5
3,746,573	-				-0.7
3,746,573	-				-1.3
3,746,573	-				-0.8
3,746,573	-				+3.1
3,746,573	-				-0.9
3,746,573	-				-1.7
3,746,573	-				+1.1
3,746,573	-				+0.7
3,746,573	-				+2.1
3,746,573	-				-0.8
3,746,573	-				+0.3
3,746,574	+				-1.1
3,746,574	+				-1.5
3,746,575	-				+0.3
3,746,575	-				-1.5
3,746,575	-				-0.3
3,746,575	-				-0.9
3,746,575	-				+1.7
3,746,575	-				+0.7
3,746,731	+		LRK53_RS17050	0.13	-1.5
3,746,731	+		LRK53_RS17050	0.13	+1.1
3,746,731	+		LRK53_RS17050	0.13	+1.1
3,746,731	+		LRK53_RS17050	0.13	+0.5
3,746,731	+		LRK53_RS17050	0.13	+1.1
3,746,731	+		LRK53_RS17050	0.13	-1.7
3,746,731	+		LRK53_RS17050	0.13	+0.1
3,746,731	+		LRK53_RS17050	0.13	+1.1
3,746,731	+		LRK53_RS17050	0.13	-2.5
3,746,731	+		LRK53_RS17050	0.13	-1.9
3,746,731	+		LRK53_RS17050	0.13	-0.7
3,746,732	-		LRK53_RS17050	0.13	-2.3
3,746,732	-		LRK53_RS17050	0.13	-0.5
3,746,732	-		LRK53_RS17050	0.13	-0.9
3,746,732	-		LRK53_RS17050	0.13	-1.3
3,746,732	-		LRK53_RS17050	0.13	+0.1
3,746,732	-		LRK53_RS17050	0.13	+0.5
3,746,908	+		LRK53_RS17050	0.25	-0.1
3,746,909	-		LRK53_RS17050	0.26	-0.3
3,746,909	-		LRK53_RS17050	0.26	+1.1
3,746,926	+		LRK53_RS17050	0.27	-0.7
3,746,926	+		LRK53_RS17050	0.27	-0.7
3,746,926	+		LRK53_RS17050	0.27	-0.4
3,746,927	-		LRK53_RS17050	0.27	-1.7
3,746,927	-		LRK53_RS17050	0.27	-0.5
3,746,927	-		LRK53_RS17050	0.27	-1.1
3,746,927	-		LRK53_RS17050	0.27	-0.9
3,746,927	-		LRK53_RS17050	0.27	+0.1
3,746,927	-		LRK53_RS17050	0.27	+0.5
3,746,927	-		LRK53_RS17050	0.27	-1.5
3,746,927	-		LRK53_RS17050	0.27	+1.5
3,746,927	-		LRK53_RS17050	0.27	-1.3
3,746,927	-		LRK53_RS17050	0.27	-2.1
3,746,932	+		LRK53_RS17050	0.27	-1.8
3,746,932	+		LRK53_RS17050	0.27	+0.1
3,746,932	+		LRK53_RS17050	0.27	+0.1
3,746,932	+		LRK53_RS17050	0.27	-1.1
3,746,933	-		LRK53_RS17050	0.27	-0.3
3,746,933	-		LRK53_RS17050	0.27	-0.5
3,746,933	-		LRK53_RS17050	0.27	-1.5
3,746,933	-		LRK53_RS17050	0.27	-1.5
3,746,947	+		LRK53_RS17050	0.28	-1.4
3,746,948	-		LRK53_RS17050	0.28	+0.5
3,746,948	-		LRK53_RS17050	0.28	-0.9
3,746,948	-		LRK53_RS17050	0.28	-1.9
3,746,948	-		LRK53_RS17050	0.28	-0.5
3,746,948	-		LRK53_RS17050	0.28	+1.1
3,746,992	+		LRK53_RS17050	0.31	+1.1