Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16480

Experiment: R2A_PIPES no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES no stress control
3,629,278	+		LRK53_RS16475	0.51	-0.5
3,629,278	+		LRK53_RS16475	0.51	-1.5
3,629,279	-		LRK53_RS16475	0.51	-1.1
3,629,450	-		LRK53_RS16475	0.60	-0.5
3,629,521	+		LRK53_RS16475	0.64	+0.1
3,629,521	+		LRK53_RS16475	0.64	+0.3
3,629,521	+		LRK53_RS16475	0.64	-0.1
3,629,521	+		LRK53_RS16475	0.64	+0.1
3,629,522	-		LRK53_RS16475	0.64	-0.7
3,629,522	-		LRK53_RS16475	0.64	-1.0
3,629,522	-		LRK53_RS16475	0.64	-0.5
3,629,560	+		LRK53_RS16475	0.66	-1.4
3,629,749	+		LRK53_RS16475	0.76	-1.7
3,629,848	+		LRK53_RS16475	0.81	+0.3
3,629,848	+		LRK53_RS16475	0.81	-2.6
3,629,848	+		LRK53_RS16475	0.81	+0.8
3,629,849	-		LRK53_RS16475	0.81	+0.7
3,630,173	-				+1.1
3,630,173	-				-0.1
3,630,173	-				-1.1
3,630,173	-				+0.1
3,630,173	-				+1.5
3,630,233	+				+2.1
3,630,233	+				-0.7
3,630,233	+				-1.5
3,630,233	+				+1.1
3,630,233	+				-0.5
3,630,234	-				+1.1
3,630,234	-				+2.1
3,630,234	-				-0.9
3,630,234	-				-1.2
3,630,271	+				-2.8
3,630,271	+				+0.1
3,630,271	+				-1.9
3,630,271	+				-0.9
3,630,271	+				-0.2
3,630,271	+				+1.1
3,630,271	+				+1.1
3,630,271	+				+0.3
3,630,271	+				+1.1
3,630,271	+				-1.6
3,630,271	+				-0.5
3,630,271	+				+0.1
3,630,271	+				+1.1
3,630,271	+				+0.1
3,630,271	+				-0.2
3,630,271	+				-2.0
3,630,271	+				-0.7
3,630,271	+				-0.7
3,630,271	+				+1.1
3,630,271	+				+0.2
3,630,271	+				+0.1
3,630,272	-				-0.6
3,630,272	-				-0.9
3,630,272	-				+1.1
3,630,272	-				+0.5
3,630,272	-				-0.1
3,630,272	-				-0.2
3,630,272	-				+1.1
3,630,272	-				-2.0
3,630,272	-				-1.2
3,630,272	-				-0.5
3,630,272	-				+0.1
3,630,272	-				-0.7
3,630,272	-				-0.9
3,630,272	-				-2.7
3,630,272	-				+0.5
3,630,272	-				-0.7
3,630,280	+				-0.7
3,630,280	+				-1.2
3,630,280	+				-0.5
3,630,280	+				-0.5
3,630,280	+				-1.5
3,630,280	+				-1.1
3,630,281	-				-0.9
3,630,281	-				+0.1
3,630,281	-				-1.2
3,630,281	-				-0.7
3,630,281	-				-0.7
3,630,283	+				+1.1
3,630,283	+				-0.3
3,630,283	+				-0.2
3,630,283	+				+0.3
3,630,283	+				+1.1
3,630,283	+				+1.1
3,630,283	+				-0.5
3,630,283	+				-1.5
3,630,283	+				-0.9
3,630,283	+				-2.1
3,630,284	-				-0.5
3,630,284	-				-1.4
3,630,284	-				+0.1
3,630,284	-				-0.6
3,630,394	+		LRK53_RS16480	0.21	-1.0
3,630,394	+		LRK53_RS16480	0.21	+0.1
3,630,394	+		LRK53_RS16480	0.21	+1.1
3,630,394	+		LRK53_RS16480	0.21	-0.9
3,630,394	+		LRK53_RS16480	0.21	-1.3
3,630,395	-		LRK53_RS16480	0.21	-1.9
3,630,395	-		LRK53_RS16480	0.21	+0.5
3,630,562	+		LRK53_RS16480	0.47	+1.7
3,630,562	+		LRK53_RS16480	0.47	-0.9
3,630,562	+		LRK53_RS16480	0.47	-0.3
3,630,562	+		LRK53_RS16480	0.47	-2.2
3,630,562	+		LRK53_RS16480	0.47	-1.7
3,630,562	+		LRK53_RS16480	0.47	-0.5
3,630,562	+		LRK53_RS16480	0.47	-1.5
3,630,563	-		LRK53_RS16480	0.48	-0.1
3,630,563	-		LRK53_RS16480	0.48	+1.1
3,630,563	-		LRK53_RS16480	0.48	-0.1
3,630,563	-		LRK53_RS16480	0.48	-1.9
3,630,563	-		LRK53_RS16480	0.48	+0.5
3,630,563	-		LRK53_RS16480	0.48	-0.5
3,630,563	-		LRK53_RS16480	0.48	+1.7
3,630,563	-		LRK53_RS16480	0.48	-2.2
3,630,604	+		LRK53_RS16480	0.54	-0.8
3,630,604	+		LRK53_RS16480	0.54	-0.9
3,630,604	+		LRK53_RS16480	0.54	-0.5
3,630,604	+		LRK53_RS16480	0.54	-0.3
3,630,604	+		LRK53_RS16480	0.54	+0.1
3,630,605	-		LRK53_RS16480	0.54	+0.7
3,630,636	+		LRK53_RS16480	0.59	-1.2
3,630,637	-		LRK53_RS16480	0.59	+0.1
3,630,637	-		LRK53_RS16480	0.59	-0.5
3,630,715	+		LRK53_RS16480	0.71	-0.5
3,630,715	+		LRK53_RS16480	0.71	-1.6
3,630,715	+		LRK53_RS16480	0.71	-0.9
3,630,715	+		LRK53_RS16480	0.71	-0.5
3,630,715	+		LRK53_RS16480	0.71	+0.1
3,630,715	+		LRK53_RS16480	0.71	-0.7
3,630,715	+		LRK53_RS16480	0.71	-2.2
3,630,715	+		LRK53_RS16480	0.71	-0.3
3,630,715	+		LRK53_RS16480	0.71	+0.1
3,630,715	+		LRK53_RS16480	0.71	-2.1
3,630,715	+		LRK53_RS16480	0.71	-1.4
3,630,715	+		LRK53_RS16480	0.71	-0.8
3,630,715	+		LRK53_RS16480	0.71	-0.9
3,630,715	+		LRK53_RS16480	0.71	-0.9
3,630,715	+		LRK53_RS16480	0.71	-1.3
3,630,715	+		LRK53_RS16480	0.71	+0.1
3,630,715	+		LRK53_RS16480	0.71	+1.1
3,630,715	+		LRK53_RS16480	0.71	-1.2
3,630,715	+		LRK53_RS16480	0.71	+1.1
3,630,715	+		LRK53_RS16480	0.71	+0.5
3,630,715	+		LRK53_RS16480	0.71	-3.2
3,630,715	+		LRK53_RS16480	0.71	-0.7
3,630,715	+		LRK53_RS16480	0.71	-1.5
3,630,715	+		LRK53_RS16480	0.71	-0.5
3,630,715	+		LRK53_RS16480	0.71	+0.1
3,630,715	+		LRK53_RS16480	0.71	-1.2
3,630,715	+		LRK53_RS16480	0.71	-1.2
3,630,715	+		LRK53_RS16480	0.71	+0.5
3,630,715	+		LRK53_RS16480	0.71	-1.1
3,630,715	+		LRK53_RS16480	0.71	+0.1
3,630,715	+		LRK53_RS16480	0.71	-0.5
3,630,715	+		LRK53_RS16480	0.71	-0.7
3,630,715	+		LRK53_RS16480	0.71	-0.9
3,630,715	+		LRK53_RS16480	0.71	-0.9
3,630,716	-		LRK53_RS16480	0.72	-0.5
3,630,716	-		LRK53_RS16480	0.72	+0.1
3,630,716	-		LRK53_RS16480	0.72	+2.1
3,630,716	-		LRK53_RS16480	0.72	-1.2
3,630,716	-		LRK53_RS16480	0.72	+2.1
3,630,716	-		LRK53_RS16480	0.72	+0.1
3,630,716	-		LRK53_RS16480	0.72	-0.5
3,630,716	-		LRK53_RS16480	0.72	+0.5
3,630,716	-		LRK53_RS16480	0.72	+0.1
3,630,716	-		LRK53_RS16480	0.72	+0.5
3,630,716	-		LRK53_RS16480	0.72	-1.2
3,630,716	-		LRK53_RS16480	0.72	-0.5
3,630,716	-		LRK53_RS16480	0.72	+0.4
3,630,716	-		LRK53_RS16480	0.72	+0.1
3,630,716	-		LRK53_RS16480	0.72	-1.1
3,630,716	-		LRK53_RS16480	0.72	-1.0
3,630,716	-		LRK53_RS16480	0.72	+2.1
3,630,716	-		LRK53_RS16480	0.72	-1.6
3,630,716	-		LRK53_RS16480	0.72	-0.8
3,630,716	-		LRK53_RS16480	0.72	+1.1
3,630,716	-		LRK53_RS16480	0.72	-0.2
3,630,716	-		LRK53_RS16480	0.72	-1.4
3,630,716	-		LRK53_RS16480	0.72	-0.9
3,630,716	-		LRK53_RS16480	0.72	+0.1
3,630,716	-		LRK53_RS16480	0.72	+0.1
3,630,716	-		LRK53_RS16480	0.72	-1.5
3,630,716	-		LRK53_RS16480	0.72	+2.1
3,630,716	-		LRK53_RS16480	0.72	-1.2
3,630,716	-		LRK53_RS16480	0.72	-1.9
3,630,716	-		LRK53_RS16480	0.72	-0.1
3,630,716	-		LRK53_RS16480	0.72	+0.1
3,630,716	-		LRK53_RS16480	0.72	+1.1
3,630,716	-		LRK53_RS16480	0.72	+1.1
3,630,716	-		LRK53_RS16480	0.72	+0.1
3,630,716	-		LRK53_RS16480	0.72	-1.1
3,630,716	-		LRK53_RS16480	0.72	-1.2
3,630,716	-		LRK53_RS16480	0.72	+2.1
3,630,716	-		LRK53_RS16480	0.72	-1.7
3,630,716	-		LRK53_RS16480	0.72	-0.1
3,630,716	-		LRK53_RS16480	0.72	-0.8
3,630,751	+		LRK53_RS16480	0.77	-2.1
3,630,751	+		LRK53_RS16480	0.77	-0.2
3,630,752	-		LRK53_RS16480	0.77	+0.1
3,630,932	+		LRK53_RS16485	0.11	-1.5
3,630,932	+		LRK53_RS16485	0.11	+0.7
3,630,932	+		LRK53_RS16485	0.11	-0.5
3,630,932	+		LRK53_RS16485	0.11	-1.5
3,630,932	+		LRK53_RS16485	0.11	-1.8
3,630,932	+		LRK53_RS16485	0.11	+0.1
3,630,933	-		LRK53_RS16485	0.11	-1.2
3,630,962	+		LRK53_RS16485	0.22	+1.1
3,630,962	+		LRK53_RS16485	0.22	-1.7
3,630,962	+		LRK53_RS16485	0.22	+2.1
3,630,962	+		LRK53_RS16485	0.22	-1.2
3,630,963	-		LRK53_RS16485	0.22	-1.5
3,630,963	-		LRK53_RS16485	0.22	+0.5
3,630,963	-		LRK53_RS16485	0.22	-1.7
3,631,176	-				-0.9
3,631,176	-				-2.2
3,631,176	-				-0.5
3,631,457	+				-0.5
3,631,457	+				-1.2
3,631,457	+				-0.9
3,631,457	+				-1.0
3,631,457	+				-1.2
3,631,457	+				-0.3
3,631,457	+				-0.9
3,631,457	+				-0.6
3,631,457	+				-0.1
3,631,457	+				-1.4
3,631,457	+				-1.2
3,631,457	+				-1.2
3,631,457	+				-0.5
3,631,457	+				-0.2
3,631,457	+				-0.1
3,631,457	+				-0.9
3,631,457	+				+0.1
3,631,457	+				-2.5
3,631,457	+				-1.2
3,631,457	+				-0.7
3,631,457	+				-1.2
3,631,458	-				-1.1
3,631,458	-				-1.0
3,631,458	-				-1.2
3,631,458	-				-1.2
3,631,458	-				-0.5
3,631,458	-				-2.6
3,631,458	-				-0.9
3,631,458	-				-0.5
3,631,458	-				-0.2
3,631,458	-				-2.6
3,631,458	-				-1.4
3,631,458	-				+0.1
3,631,458	-				-2.9
3,631,458	-				-0.2
3,631,458	-				+1.1
3,631,458	-				-1.5
3,631,458	-				-0.4
3,631,458	-				-0.5
3,631,458	-				-0.9
3,631,458	-				+0.1
3,631,458	-				-0.2
3,631,458	-				-0.5
3,631,458	-				-1.4
3,631,458	-				+0.1
3,631,763	+		LRK53_RS16490	0.16	-0.5
3,631,764	-		LRK53_RS16490	0.16	-0.5