Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15545

Experiment: R2A_PIPES no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES no stress control
3,407,315	+				-1.4
3,407,315	+				+1.0
3,407,315	+				-0.7
3,407,316	-				-0.3
3,407,376	+				-1.6
3,407,376	+				-0.4
3,407,376	+				-1.3
3,407,376	+				-1.0
3,407,376	+				+1.0
3,407,376	+				+0.1
3,407,377	-				-1.4
3,407,377	-				-1.0
3,407,377	-				-0.6
3,407,377	-				+0.0
3,407,377	-				-0.6
3,407,377	-				-0.9
3,407,377	-				-0.6
3,407,377	-				+0.3
3,407,377	-				-0.6
3,407,377	-				+0.0
3,407,377	-				+0.0
3,407,377	-				+0.6
3,407,614	+				-1.0
3,407,614	+				+0.4
3,407,615	-				+1.0
3,407,615	-				-1.0
3,407,615	-				+0.0
3,407,615	-				+0.4
3,407,699	-				-2.2
3,407,699	-				+0.0
3,407,699	-				+0.0
3,407,699	-				+0.2
3,407,699	-				+1.0
3,407,699	-				-0.6
3,407,699	-				+2.0
3,407,699	-				-0.6
3,407,699	-				+0.2
3,407,699	-				+0.0
3,407,699	-				-0.4
3,407,699	-				+0.0
3,407,699	-				+0.4
3,407,699	-				-2.2
3,407,699	-				-1.0
3,407,703	-				-0.7
3,407,703	-				-0.6
3,407,703	-				-0.8
3,407,703	-				-1.3
3,407,703	-				-1.0
3,407,703	-				+1.0
3,407,703	-				-1.0
3,407,703	-				+1.4
3,407,703	-				+1.0
3,407,703	-				+0.0
3,407,703	-				-0.6
3,407,703	-				-0.2
3,407,724	+				-0.9
3,407,901	+				-1.8
3,407,901	+				+1.6
3,407,901	+				-0.4
3,407,901	+				+0.0
3,407,901	+				-1.6
3,407,901	+				-1.3
3,407,901	+				-0.3
3,407,901	+				-0.3
3,407,902	-				-0.7
3,407,902	-				-0.6
3,407,902	-				+0.4
3,407,902	-				+1.6
3,407,902	-				-0.8
3,407,902	-				+1.0
3,407,902	-				-0.6
3,407,905	+				-0.6
3,407,905	+				-0.7
3,407,905	+				+0.6
3,407,905	+				+0.0
3,407,905	+				-1.5
3,407,905	+				-0.9
3,407,905	+				-0.2
3,407,905	+				+0.0
3,407,905	+				+0.4
3,407,905	+				+0.0
3,407,905	+				-1.8
3,407,905	+				-0.6
3,407,905	+				+1.0
3,407,905	+				-1.7
3,407,905	+				-0.5
3,407,905	+				-1.1
3,407,905	+				-2.2
3,407,905	+				-0.4
3,407,905	+				-1.1
3,407,905	+				-0.4
3,407,905	+				+1.4
3,407,906	-				-0.3
3,407,906	-				-1.2
3,407,906	-				-1.2
3,407,906	-				+0.6
3,407,906	-				-0.6
3,407,906	-				-1.1
3,407,906	-				-2.1
3,407,906	-				-0.4
3,407,906	-				-0.5
3,407,906	-				-0.5
3,407,906	-				-1.3
3,407,906	-				+1.0
3,407,906	-				+0.0
3,407,906	-				-1.7
3,407,960	+				+0.0
3,407,961	-				-1.3
3,407,961	-				-1.4
3,407,961	-				-1.0
3,407,961	-				-1.3
3,407,961	-				-1.3
3,408,091	+				+1.0
3,408,091	+				-1.1
3,408,091	+				+2.6
3,408,091	+				-0.2
3,408,091	+				-1.7
3,408,091	+				-1.1
3,408,145	+				-2.9
3,408,145	+				+0.0
3,408,145	+				-0.3
3,408,145	+				-0.6
3,408,145	+				-0.2
3,408,145	+				+0.6
3,408,145	+				-1.6
3,408,145	+				-1.2
3,408,145	+				+1.6
3,408,145	+				-0.9
3,408,145	+				-1.8
3,408,146	-				+0.4
3,408,146	-				+0.0
3,408,146	-				-1.0
3,408,146	-				-2.6
3,408,313	+				+1.0
3,408,313	+				+0.0
3,408,313	+				+1.0
3,408,313	+				-1.0
3,408,313	+				+1.0
3,408,313	+				-1.0
3,408,313	+				-0.6
3,408,313	+				+1.0
3,408,313	+				+0.0
3,408,314	-				-1.8
3,408,314	-				+0.4
3,408,314	-				-1.0
3,408,314	-				-1.0
3,408,314	-				-0.3
3,408,314	-				-0.3
3,408,314	-				-0.6
3,408,355	+		LRK53_RS15545	0.25	-1.3
3,408,355	+		LRK53_RS15545	0.25	-0.4
3,408,355	+		LRK53_RS15545	0.25	+0.0
3,408,356	-		LRK53_RS15545	0.26	-0.6
3,408,356	-		LRK53_RS15545	0.26	-1.9
3,408,409	+		LRK53_RS15545	0.46	-0.8
3,408,409	+		LRK53_RS15545	0.46	-1.8
3,408,422	+		LRK53_RS15545	0.51	-0.6
3,408,422	+		LRK53_RS15545	0.51	-0.3
3,408,422	+		LRK53_RS15545	0.51	+0.0
3,408,422	+		LRK53_RS15545	0.51	+1.6
3,408,422	+		LRK53_RS15545	0.51	-1.6
3,408,422	+		LRK53_RS15545	0.51	-2.6
3,408,422	+		LRK53_RS15545	0.51	+0.4
3,408,422	+		LRK53_RS15545	0.51	+0.0
3,408,422	+		LRK53_RS15545	0.51	+0.0
3,408,423	-		LRK53_RS15545	0.52	-2.2
3,408,423	-		LRK53_RS15545	0.52	-1.6
3,408,423	-		LRK53_RS15545	0.52	-1.1
3,408,423	-		LRK53_RS15545	0.52	-1.2
3,408,423	-		LRK53_RS15545	0.52	-1.0
3,408,526	+				-0.6
3,408,527	-				-0.6
3,408,527	-				-1.0
3,408,527	-				-2.0
3,408,531	+				-1.6
3,408,531	+				+0.0
3,408,531	+				-1.5
3,408,531	+				-1.0
3,408,531	+				-0.6
3,408,531	+				-0.6
3,408,531	+				-1.3
3,408,531	+				+1.4
3,408,531	+				-0.6
3,408,531	+				-1.0
3,408,531	+				-1.0
3,408,531	+				+0.0
3,408,531	+				-0.4
3,408,531	+				-0.3
3,408,532	-				-1.3
3,408,532	-				-0.1
3,408,532	-				+0.6
3,408,532	-				+1.0
3,408,532	-				-1.3
3,408,532	-				-0.5
3,408,532	-				-0.6
3,408,532	-				-1.3
3,408,532	-				-1.0
3,408,532	-				-1.8
3,408,545	+				+0.0
3,408,545	+				+2.0
3,408,545	+				-1.2
3,408,545	+				-1.3
3,408,545	+				-0.6
3,408,545	+				-1.0
3,408,545	+				-2.7
3,408,545	+				-1.0
3,408,545	+				-2.2
3,408,545	+				-0.1
3,408,545	+				+0.0
3,408,545	+				-2.6
3,408,545	+				+0.0
3,408,545	+				+1.0
3,408,545	+				+0.3
3,408,545	+				-1.7
3,408,545	+				-1.2
3,408,546	-				-1.3
3,408,546	-				+0.0
3,408,546	-				-1.4
3,408,546	-				-0.4
3,408,546	-				+1.0
3,408,546	-				+1.0
3,408,546	-				+0.0
3,408,546	-				-1.2
3,408,546	-				-1.3
3,408,546	-				+1.0
3,408,546	-				+1.0
3,408,546	-				+0.0
3,408,546	-				+1.0
3,408,546	-				-0.6
3,408,546	-				-0.5
3,408,546	-				+0.4
3,408,546	-				+1.0
3,408,546	-				-1.0
3,408,546	-				+1.0
3,408,546	-				-1.1
3,408,546	-				-1.3
3,408,546	-				-2.3
3,408,546	-				+1.0
3,408,546	-				-0.6
3,408,546	-				+1.0
3,408,546	-				-1.3
3,408,546	-				-0.6
3,408,546	-				-1.3
3,408,546	-				-1.3
3,408,546	-				+0.0
3,408,546	-				-0.6
3,408,549	+				-0.6
3,408,549	+				-1.3
3,408,549	+				-0.4
3,408,549	+				-2.4
3,408,549	+				+0.6
3,408,549	+				-2.6
3,408,549	+				+0.0
3,408,549	+				+0.0
3,408,549	+				+0.0
3,408,549	+				+0.0
3,408,549	+				+1.0
3,408,549	+				-1.5
3,408,549	+				+0.0
3,408,549	+				+1.0
3,408,549	+				-2.5
3,408,549	+				+0.0
3,408,549	+				-1.8
3,408,549	+				+0.4
3,408,549	+				-0.3
3,408,550	-				+0.0
3,408,550	-				-0.2
3,408,550	-				+1.0
3,408,550	-				+1.0
3,408,550	-				-0.3
3,408,550	-				+0.0
3,408,550	-				-1.5
3,408,550	-				+0.0
3,408,550	-				-1.5
3,408,550	-				-0.6
3,408,550	-				-0.8
3,408,550	-				-1.0
3,408,550	-				+0.0
3,408,550	-				-1.5
3,408,550	-				-0.6
3,408,550	-				-0.3
3,408,550	-				-1.0
3,408,550	-				-0.6
3,408,550	-				-1.0
3,408,550	-				-1.8
3,408,550	-				+1.0
3,408,657	+				-0.4
3,408,657	+				+1.0
3,408,657	+				-1.3
3,408,657	+				+0.0
3,408,658	-				-0.6
3,408,658	-				+1.0
3,408,658	-				+1.0
3,408,658	-				-1.0
3,408,658	-				-1.1
3,408,658	-				-0.7
3,408,658	-				+0.6
3,408,658	-				-0.3
3,408,686	+				-0.6
3,408,687	-				-1.3
3,408,687	-				-1.6
3,408,893	+		LRK53_RS15550	0.55	-1.5
3,408,893	+		LRK53_RS15550	0.55	-0.6
3,408,893	+		LRK53_RS15550	0.55	+0.0
3,408,893	+		LRK53_RS15550	0.55	+0.0
3,408,894	-		LRK53_RS15550	0.55	-1.2
3,408,894	-		LRK53_RS15550	0.55	+1.0
3,408,894	-		LRK53_RS15550	0.55	-1.3
3,408,941	-		LRK53_RS15550	0.66	+1.0
3,408,963	+		LRK53_RS15550	0.70	+1.0
3,408,970	+		LRK53_RS15550	0.72	-2.0
3,408,977	+		LRK53_RS15550	0.74	-1.0
3,408,977	+		LRK53_RS15550	0.74	-0.6
3,408,977	+		LRK53_RS15550	0.74	+1.0
3,408,977	+		LRK53_RS15550	0.74	+0.0
3,408,977	+		LRK53_RS15550	0.74	-0.8
3,408,977	+		LRK53_RS15550	0.74	-1.3
3,408,977	+		LRK53_RS15550	0.74	-1.0
3,408,977	+		LRK53_RS15550	0.74	-1.3
3,408,977	+		LRK53_RS15550	0.74	-0.7
3,408,978	-		LRK53_RS15550	0.74	+0.0
3,408,978	-		LRK53_RS15550	0.74	-0.3
3,409,014	+		LRK53_RS15550	0.82	-0.9
3,409,014	+		LRK53_RS15550	0.82	-0.7
3,409,014	+		LRK53_RS15550	0.82	-0.2
3,409,015	-		LRK53_RS15550	0.82	-0.5
3,409,015	-		LRK53_RS15550	0.82	-1.3
3,409,015	-		LRK53_RS15550	0.82	+2.0
3,409,079	+				-1.0
3,409,094	+				-0.6
3,409,095	-				-0.3
3,409,328	+		LRK53_RS15555	0.18	-1.3
3,409,328	+		LRK53_RS15555	0.18	-1.0
3,409,328	+		LRK53_RS15555	0.18	-0.6
3,409,328	+		LRK53_RS15555	0.18	+1.0
3,409,328	+		LRK53_RS15555	0.18	+1.6
3,409,328	+		LRK53_RS15555	0.18	-0.2
3,409,329	-		LRK53_RS15555	0.18	-1.3
3,409,329	-		LRK53_RS15555	0.18	+0.0
3,409,329	-		LRK53_RS15555	0.18	-1.3
3,409,334	+		LRK53_RS15555	0.18	-0.7
3,409,334	+		LRK53_RS15555	0.18	-2.6
3,409,334	+		LRK53_RS15555	0.18	-1.3
3,409,334	+		LRK53_RS15555	0.18	+1.0
3,409,334	+		LRK53_RS15555	0.18	-0.5
3,409,334	+		LRK53_RS15555	0.18	-0.6
3,409,334	+		LRK53_RS15555	0.18	-0.7
3,409,334	+		LRK53_RS15555	0.18	+0.0
3,409,334	+		LRK53_RS15555	0.18	-0.3
3,409,335	-		LRK53_RS15555	0.18	-1.0
3,409,335	-		LRK53_RS15555	0.18	-1.1
3,409,377	+		LRK53_RS15555	0.22	-1.8
3,409,378	-		LRK53_RS15555	0.22	+0.0
3,409,378	-		LRK53_RS15555	0.22	-0.7
3,409,378	-		LRK53_RS15555	0.22	-0.6
3,409,378	-		LRK53_RS15555	0.22	-1.3