Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15480

Experiment: R2A_PIPES no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES no stress control
3,382,154	+				+0.3
3,382,155	-				+0.4
3,382,155	-				-1.0
3,382,265	+		LRK53_RS15475	0.13	-1.6
3,382,265	+		LRK53_RS15475	0.13	+1.0
3,382,265	+		LRK53_RS15475	0.13	-0.8
3,382,265	+		LRK53_RS15475	0.13	-0.3
3,382,266	-		LRK53_RS15475	0.13	-1.0
3,382,266	-		LRK53_RS15475	0.13	+1.0
3,382,569	-		LRK53_RS15475	0.44	-1.0
3,382,667	+		LRK53_RS15475	0.54	-1.4
3,382,667	+		LRK53_RS15475	0.54	+0.0
3,382,667	+		LRK53_RS15475	0.54	-1.8
3,382,667	+		LRK53_RS15475	0.54	-0.4
3,382,667	+		LRK53_RS15475	0.54	+0.1
3,382,668	-		LRK53_RS15475	0.54	-0.4
3,382,668	-		LRK53_RS15475	0.54	-0.3
3,382,668	-		LRK53_RS15475	0.54	-1.0
3,382,668	-		LRK53_RS15475	0.54	-0.8
3,382,668	-		LRK53_RS15475	0.54	-0.1
3,382,700	+		LRK53_RS15475	0.57	-0.8
3,382,700	+		LRK53_RS15475	0.57	+0.6
3,382,701	-		LRK53_RS15475	0.57	-2.3
3,382,701	-		LRK53_RS15475	0.57	-2.2
3,382,701	-		LRK53_RS15475	0.57	-0.8
3,382,701	-		LRK53_RS15475	0.57	+0.0
3,382,910	+		LRK53_RS15475	0.79	-1.6
3,382,910	+		LRK53_RS15475	0.79	+0.4
3,382,911	-		LRK53_RS15475	0.79	-1.2
3,382,911	-		LRK53_RS15475	0.79	-0.3
3,382,961	+		LRK53_RS15475	0.84	-1.0
3,382,961	+		LRK53_RS15475	0.84	-0.8
3,382,961	+		LRK53_RS15475	0.84	+0.0
3,382,961	+		LRK53_RS15475	0.84	-0.4
3,382,961	+		LRK53_RS15475	0.84	-1.0
3,382,962	-		LRK53_RS15475	0.84	-1.8
3,382,962	-		LRK53_RS15475	0.84	+0.4
3,382,962	-		LRK53_RS15475	0.84	-0.5
3,382,962	-		LRK53_RS15475	0.84	-0.6
3,382,962	-		LRK53_RS15475	0.84	+1.0
3,383,602	+		LRK53_RS15480	0.30	-1.5
3,383,644	+		LRK53_RS15480	0.32	-0.6
3,383,644	+		LRK53_RS15480	0.32	-2.1
3,383,645	-		LRK53_RS15480	0.32	-1.6
3,383,645	-		LRK53_RS15480	0.32	+0.3
3,383,824	+		LRK53_RS15480	0.43	+2.0
3,383,824	+		LRK53_RS15480	0.43	-1.0
3,383,824	+		LRK53_RS15480	0.43	-0.6
3,383,824	+		LRK53_RS15480	0.43	-0.8
3,383,824	+		LRK53_RS15480	0.43	-0.6
3,383,824	+		LRK53_RS15480	0.43	+0.0
3,383,824	+		LRK53_RS15480	0.43	-0.6
3,383,824	+		LRK53_RS15480	0.43	-1.4
3,383,824	+		LRK53_RS15480	0.43	-0.6
3,383,825	-		LRK53_RS15480	0.44	-1.0
3,383,825	-		LRK53_RS15480	0.44	+0.7
3,383,825	-		LRK53_RS15480	0.44	+0.0
3,383,825	-		LRK53_RS15480	0.44	+0.2
3,383,825	-		LRK53_RS15480	0.44	-1.8
3,383,825	-		LRK53_RS15480	0.44	-0.8
3,383,825	-		LRK53_RS15480	0.44	+1.0
3,383,863	+		LRK53_RS15480	0.46	-1.3
3,383,864	-		LRK53_RS15480	0.46	-2.0
3,383,864	-		LRK53_RS15480	0.46	+0.6
3,383,893	+		LRK53_RS15480	0.48	-1.8
3,383,893	+		LRK53_RS15480	0.48	-2.0
3,383,894	-		LRK53_RS15480	0.48	+0.0
3,383,894	-		LRK53_RS15480	0.48	+2.0
3,383,894	-		LRK53_RS15480	0.48	-2.0
3,383,894	-		LRK53_RS15480	0.48	+0.0
3,383,894	-		LRK53_RS15480	0.48	-0.3
3,384,019	+		LRK53_RS15480	0.56	+0.0
3,384,019	+		LRK53_RS15480	0.56	-0.9
3,384,019	+		LRK53_RS15480	0.56	+0.2
3,384,019	+		LRK53_RS15480	0.56	-0.5
3,384,019	+		LRK53_RS15480	0.56	+1.4
3,384,019	+		LRK53_RS15480	0.56	-0.5
3,384,019	+		LRK53_RS15480	0.56	-0.2
3,384,019	+		LRK53_RS15480	0.56	+0.4
3,384,020	-		LRK53_RS15480	0.56	-1.3
3,384,020	-		LRK53_RS15480	0.56	-1.2
3,384,020	-		LRK53_RS15480	0.56	+1.0
3,384,020	-		LRK53_RS15480	0.56	+1.0
3,384,022	+		LRK53_RS15480	0.56	+0.0
3,384,022	+		LRK53_RS15480	0.56	-0.8
3,384,022	+		LRK53_RS15480	0.56	+1.6
3,384,022	+		LRK53_RS15480	0.56	-1.6
3,384,022	+		LRK53_RS15480	0.56	-1.0
3,384,022	+		LRK53_RS15480	0.56	-0.6
3,384,022	+		LRK53_RS15480	0.56	+0.0
3,384,023	-		LRK53_RS15480	0.56	+0.3
3,384,023	-		LRK53_RS15480	0.56	-1.1
3,384,023	-		LRK53_RS15480	0.56	+0.0
3,384,023	-		LRK53_RS15480	0.56	-1.3
3,384,023	-		LRK53_RS15480	0.56	-1.0
3,384,028	+		LRK53_RS15480	0.56	-2.4
3,384,028	+		LRK53_RS15480	0.56	+0.2
3,384,041	-		LRK53_RS15480	0.57	-1.0
3,384,041	-		LRK53_RS15480	0.57	+0.3
3,384,217	+		LRK53_RS15480	0.68	-0.6
3,384,217	+		LRK53_RS15480	0.68	-1.0
3,384,217	+		LRK53_RS15480	0.68	-1.5
3,384,218	-		LRK53_RS15480	0.68	+0.3
3,384,218	-		LRK53_RS15480	0.68	-1.0
3,384,259	+		LRK53_RS15480	0.70	-0.6
3,384,259	+		LRK53_RS15480	0.70	-1.3
3,384,259	+		LRK53_RS15480	0.70	+0.4
3,384,259	+		LRK53_RS15480	0.70	-1.9
3,384,259	+		LRK53_RS15480	0.70	+0.0
3,384,259	+		LRK53_RS15480	0.70	-1.0
3,384,259	+		LRK53_RS15480	0.70	-1.3
3,384,259	+		LRK53_RS15480	0.70	-2.7
3,384,260	-		LRK53_RS15480	0.70	-2.0
3,384,260	-		LRK53_RS15480	0.70	-0.7
3,384,260	-		LRK53_RS15480	0.70	-0.4
3,384,260	-		LRK53_RS15480	0.70	+1.0
3,384,260	-		LRK53_RS15480	0.70	-0.8
3,384,260	-		LRK53_RS15480	0.70	-1.0
3,384,260	-		LRK53_RS15480	0.70	-0.8
3,384,260	-		LRK53_RS15480	0.70	+2.3
3,384,260	-		LRK53_RS15480	0.70	-2.2
3,384,262	+		LRK53_RS15480	0.70	-1.3
3,384,262	+		LRK53_RS15480	0.70	-1.2
3,384,263	-		LRK53_RS15480	0.71	-1.0
3,384,263	-		LRK53_RS15480	0.71	-2.7
3,384,263	-		LRK53_RS15480	0.71	-2.3
3,384,263	-		LRK53_RS15480	0.71	+0.0
3,384,263	-		LRK53_RS15480	0.71	-0.4
3,384,263	-		LRK53_RS15480	0.71	-2.2
3,384,361	+		LRK53_RS15480	0.77	-0.6
3,384,361	+		LRK53_RS15480	0.77	-2.0
3,384,361	+		LRK53_RS15480	0.77	-0.9
3,384,361	+		LRK53_RS15480	0.77	-1.0
3,384,361	+		LRK53_RS15480	0.77	-0.6
3,384,361	+		LRK53_RS15480	0.77	+0.4
3,384,361	+		LRK53_RS15480	0.77	-2.0
3,384,361	+		LRK53_RS15480	0.77	-0.4
3,384,361	+		LRK53_RS15480	0.77	+0.3
3,384,362	-		LRK53_RS15480	0.77	-1.3
3,384,362	-		LRK53_RS15480	0.77	-0.4
3,384,362	-		LRK53_RS15480	0.77	-0.4
3,384,362	-		LRK53_RS15480	0.77	+1.0
3,384,362	-		LRK53_RS15480	0.77	-0.5
3,384,535	+		LRK53_RS15480	0.87	+1.0
3,384,622	+				-0.6
3,384,622	+				+1.0
3,384,622	+				+1.0
3,384,622	+				-1.0
3,384,623	-				+0.5
3,384,623	-				-1.4
3,384,623	-				-0.3
3,384,694	+				+0.6
3,384,694	+				-0.3
3,384,694	+				+0.0
3,384,694	+				+0.0
3,384,694	+				-1.3
3,384,695	-				-0.4
3,384,695	-				+0.0
3,384,695	-				+1.0
3,384,695	-				-0.2
3,384,703	+				-1.8
3,384,703	+				-2.3
3,384,703	+				+0.0
3,384,703	+				+0.7
3,384,704	-				-1.0
3,384,704	-				-0.6
3,384,704	-				-0.3
3,384,704	-				-1.6
3,384,704	-				+1.0
3,384,704	-				+0.4
3,384,704	-				+0.0
3,384,704	-				-1.0
3,384,704	-				-1.6
3,384,704	-				-0.6
3,384,804	+				-0.6
3,384,804	+				-1.0
3,384,805	-				+0.4
3,384,840	+				-1.6
3,384,840	+				+1.3
3,384,840	+				-1.3
3,384,840	+				-0.8
3,384,840	+				-0.6
3,384,840	+				-2.0
3,384,840	+				-3.4
3,384,840	+				-1.0
3,384,840	+				-1.0
3,384,840	+				+1.0
3,384,840	+				+0.0
3,384,840	+				-1.3
3,384,840	+				+0.0
3,384,840	+				+0.4
3,384,840	+				+0.0
3,384,840	+				+1.0
3,384,840	+				+1.0
3,384,841	-				-1.6
3,384,841	-				-0.9
3,384,841	-				+0.0
3,384,841	-				-1.0
3,384,841	-				-0.8
3,384,841	-				-0.6
3,384,841	-				-0.6
3,384,841	-				-0.6
3,384,841	-				-0.6
3,384,841	-				+0.3
3,384,841	-				+0.2
3,384,841	-				+1.6
3,384,841	-				-1.8
3,384,841	-				-1.1
3,384,841	-				-0.6
3,384,841	-				-0.6
3,384,841	-				-0.3
3,384,841	-				-1.6
3,384,844	+				+0.0
3,384,844	+				-0.8
3,384,845	-				-0.3
3,384,845	-				-1.3
3,384,845	-				-0.9
3,384,845	-				+1.0
3,384,845	-				-0.7
3,384,845	-				+1.0
3,384,993	-				+0.0
3,384,993	-				-1.6
3,384,993	-				-1.6
3,384,993	-				-0.7
3,385,010	+				-0.6
3,385,010	+				+1.0
3,385,010	+				-0.3
3,385,010	+				+0.0
3,385,010	+				+1.0
3,385,011	-				+1.0
3,385,011	-				-2.2
3,385,011	-				-0.3
3,385,011	-				-0.6
3,385,011	-				-1.3
3,385,011	-				+0.4
3,385,011	-				-1.0
3,385,014	+				+0.0
3,385,014	+				+1.0
3,385,014	+				+2.0
3,385,014	+				+0.5
3,385,014	+				-1.8
3,385,014	+				-1.3
3,385,014	+				+0.0
3,385,014	+				+0.4
3,385,014	+				-0.1
3,385,014	+				-0.9
3,385,014	+				+0.6
3,385,014	+				-1.0
3,385,014	+				+1.0
3,385,014	+				-0.8
3,385,014	+				-0.6
3,385,014	+				-1.0
3,385,015	-				-1.0
3,385,015	-				-1.5
3,385,015	-				-0.7
3,385,015	-				+0.4
3,385,015	-				-1.6
3,385,015	-				-1.8
3,385,015	-				-0.9
3,385,015	-				-1.3
3,385,015	-				+1.0
3,385,015	-				-1.0
3,385,015	-				-0.3
3,385,015	-				+1.0
3,385,015	-				-0.2
3,385,015	-				-0.4
3,385,015	-				+1.0
3,385,015	-				-1.1
3,385,015	-				+0.4
3,385,015	-				+0.0
3,385,015	-				-1.8
3,385,015	-				-1.8
3,385,049	+				-1.0
3,385,049	+				-1.2
3,385,049	+				+0.0
3,385,049	+				+0.4
3,385,049	+				-2.0
3,385,049	+				-2.7
3,385,049	+				+2.6
3,385,049	+				-0.6
3,385,049	+				-1.6
3,385,050	-				+0.0
3,385,050	-				-1.8
3,385,050	-				-0.6
3,385,050	-				-1.0
3,385,050	-				-2.2
3,385,050	-				-0.3
3,385,050	-				-1.4
3,385,050	-				+1.6
3,385,050	-				+0.0
3,385,171	+				-1.6
3,385,171	+				-0.3
3,385,171	+				-1.3
3,385,171	+				-1.8
3,385,171	+				-1.6
3,385,171	+				-0.2
3,385,171	+				+0.3
3,385,171	+				-0.6
3,385,171	+				-1.0
3,385,171	+				-1.2
3,385,171	+				-1.2
3,385,171	+				-1.1
3,385,171	+				-1.6
3,385,171	+				-0.8
3,385,171	+				-0.6
3,385,171	+				-1.8
3,385,171	+				+0.1
3,385,171	+				-0.6
3,385,171	+				-0.7
3,385,172	-				-0.8
3,385,172	-				+0.0
3,385,172	-				-1.1
3,385,172	-				+1.0
3,385,172	-				-0.9
3,385,172	-				-1.3
3,385,172	-				-0.6
3,385,172	-				+0.0
3,385,172	-				+0.0
3,385,172	-				-0.6
3,385,231	+				-0.2
3,385,231	+				+1.0
3,385,231	+				+0.8
3,385,231	+				-0.6
3,385,231	+				-0.6
3,385,231	+				+0.2
3,385,231	+				-0.6
3,385,231	+				+0.6
3,385,231	+				-1.3
3,385,231	+				-1.3
3,385,231	+				+0.0
3,385,231	+				-0.6
3,385,231	+				-1.2
3,385,232	-				-1.3
3,385,232	-				-0.8
3,385,232	-				-0.6
3,385,232	-				-0.3
3,385,232	-				+1.0
3,385,232	-				-0.4
3,385,232	-				+0.4
3,385,232	-				-1.0
3,385,232	-				-2.0
3,385,232	-				-0.6
3,385,232	-				-0.2
3,385,232	-				+0.0
3,385,232	-				-1.4
3,385,232	-				-0.4
3,385,232	-				-0.5
3,385,232	-				-0.7
3,385,232	-				+0.4
3,385,243	+				-1.2
3,385,243	+				-2.3
3,385,243	+				-0.4
3,385,243	+				-0.7
3,385,244	-				+1.0
3,385,244	-				-1.6