Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14540

Experiment: R2A_PIPES no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES no stress control
3,184,705	+		LRK53_RS14535	0.63	-1.3
3,184,706	-		LRK53_RS14535	0.63	-0.6
3,184,706	-		LRK53_RS14535	0.63	+0.4
3,184,777	+		LRK53_RS14535	0.66	-1.2
3,184,777	+		LRK53_RS14535	0.66	-0.4
3,184,777	+		LRK53_RS14535	0.66	-1.0
3,184,777	+		LRK53_RS14535	0.66	-0.6
3,184,777	+		LRK53_RS14535	0.66	-1.4
3,184,778	-		LRK53_RS14535	0.66	-2.2
3,184,778	-		LRK53_RS14535	0.66	+0.2
3,184,778	-		LRK53_RS14535	0.66	-1.4
3,184,778	-		LRK53_RS14535	0.66	+1.0
3,184,778	-		LRK53_RS14535	0.66	-1.6
3,184,778	-		LRK53_RS14535	0.66	-2.0
3,184,778	-		LRK53_RS14535	0.66	-0.0
3,184,888	+		LRK53_RS14535	0.71	-1.0
3,184,888	+		LRK53_RS14535	0.71	-0.6
3,184,889	-		LRK53_RS14535	0.71	-1.4
3,184,889	-		LRK53_RS14535	0.71	-0.6
3,184,889	-		LRK53_RS14535	0.71	+0.2
3,184,889	-		LRK53_RS14535	0.71	-0.0
3,184,889	-		LRK53_RS14535	0.71	-0.0
3,184,889	-		LRK53_RS14535	0.71	+2.5
3,184,889	-		LRK53_RS14535	0.71	-0.4
3,184,889	-		LRK53_RS14535	0.71	-0.2
3,184,889	-		LRK53_RS14535	0.71	-0.0
3,185,122	+		LRK53_RS14535	0.81	-1.2
3,185,122	+		LRK53_RS14535	0.81	-1.9
3,185,123	-		LRK53_RS14535	0.81	-0.0
3,185,123	-		LRK53_RS14535	0.81	-1.2
3,185,123	-		LRK53_RS14535	0.81	-0.9
3,185,123	-		LRK53_RS14535	0.81	-2.2
3,185,123	-		LRK53_RS14535	0.81	-0.3
3,185,123	-		LRK53_RS14535	0.81	+0.4
3,185,123	-		LRK53_RS14535	0.81	-1.1
3,185,125	+		LRK53_RS14535	0.81	-1.4
3,185,125	+		LRK53_RS14535	0.81	-1.9
3,185,125	+		LRK53_RS14535	0.81	-0.6
3,185,125	+		LRK53_RS14535	0.81	-1.0
3,185,125	+		LRK53_RS14535	0.81	-0.0
3,185,125	+		LRK53_RS14535	0.81	-2.4
3,185,125	+		LRK53_RS14535	0.81	-1.0
3,185,125	+		LRK53_RS14535	0.81	+1.0
3,185,125	+		LRK53_RS14535	0.81	+2.0
3,185,125	+		LRK53_RS14535	0.81	-0.6
3,185,125	+		LRK53_RS14535	0.81	-1.0
3,185,125	+		LRK53_RS14535	0.81	+0.1
3,185,125	+		LRK53_RS14535	0.81	-2.7
3,185,125	+		LRK53_RS14535	0.81	+1.0
3,185,125	+		LRK53_RS14535	0.81	-1.0
3,185,125	+		LRK53_RS14535	0.81	-0.6
3,185,125	+		LRK53_RS14535	0.81	+1.5
3,185,125	+		LRK53_RS14535	0.81	-1.0
3,185,125	+		LRK53_RS14535	0.81	-0.0
3,185,126	-		LRK53_RS14535	0.81	+1.0
3,185,126	-		LRK53_RS14535	0.81	+0.2
3,185,126	-		LRK53_RS14535	0.81	-0.9
3,185,126	-		LRK53_RS14535	0.81	+2.0
3,185,126	-		LRK53_RS14535	0.81	-0.7
3,185,126	-		LRK53_RS14535	0.81	-0.9
3,185,126	-		LRK53_RS14535	0.81	-0.0
3,185,126	-		LRK53_RS14535	0.81	-0.0
3,185,126	-		LRK53_RS14535	0.81	+1.0
3,185,126	-		LRK53_RS14535	0.81	+2.0
3,185,126	-		LRK53_RS14535	0.81	-2.4
3,185,126	-		LRK53_RS14535	0.81	-0.3
3,185,126	-		LRK53_RS14535	0.81	-0.6
3,185,126	-		LRK53_RS14535	0.81	-0.6
3,185,126	-		LRK53_RS14535	0.81	+1.5
3,185,126	-		LRK53_RS14535	0.81	-0.5
3,185,126	-		LRK53_RS14535	0.81	+0.2
3,185,126	-		LRK53_RS14535	0.81	-2.2
3,185,182	+		LRK53_RS14535	0.83	-0.6
3,185,182	+		LRK53_RS14535	0.83	-2.4
3,185,183	-		LRK53_RS14535	0.83	+1.0
3,185,183	-		LRK53_RS14535	0.83	-0.9
3,185,286	+		LRK53_RS14535	0.88	-0.0
3,185,558	-				-1.4
3,185,558	-				-0.0
3,185,558	-				-0.0
3,185,569	+				-1.0
3,185,569	+				-0.0
3,185,569	+				-1.2
3,185,569	+				-1.4
3,185,569	+				-0.9
3,185,569	+				+1.0
3,185,570	-				+0.2
3,185,570	-				-0.9
3,185,570	-				+1.5
3,185,570	-				-0.6
3,185,570	-				-0.0
3,185,570	-				+0.4
3,185,570	-				-0.4
3,185,570	-				-1.1
3,185,570	-				-1.7
3,185,570	-				-0.6
3,185,570	-				-0.0
3,185,570	-				-2.0
3,185,570	-				-0.7
3,185,570	-				-0.6
3,185,578	+				-1.4
3,185,578	+				+0.2
3,185,578	+				-0.3
3,185,578	+				+0.2
3,185,578	+				-1.0
3,185,578	+				-0.9
3,185,578	+				+0.2
3,185,578	+				-0.6
3,185,578	+				-0.7
3,185,578	+				-0.0
3,185,578	+				+1.0
3,185,578	+				-1.6
3,185,578	+				+0.5
3,185,579	-				+1.0
3,185,579	-				-0.6
3,185,579	-				-0.6
3,185,579	-				-0.0
3,185,579	-				-0.0
3,185,579	-				+0.4
3,185,579	-				-1.3
3,185,579	-				-0.0
3,185,579	-				-0.8
3,185,579	-				-1.0
3,185,579	-				-1.0
3,185,579	-				+0.4
3,185,579	-				-1.0
3,185,579	-				+1.0
3,185,579	-				-1.0
3,185,579	-				-0.6
3,185,654	+				-0.5
3,185,654	+				-0.7
3,185,654	+				-0.0
3,185,655	-				-0.0
3,185,783	+		LRK53_RS14540	0.35	-0.0
3,185,784	-		LRK53_RS14540	0.35	-0.6
3,185,894	+		LRK53_RS14540	0.62	+1.4
3,185,894	+		LRK53_RS14540	0.62	-0.6
3,185,894	+		LRK53_RS14540	0.62	-0.6
3,185,894	+		LRK53_RS14540	0.62	-1.6
3,185,895	-		LRK53_RS14540	0.62	-2.1
3,185,895	-		LRK53_RS14540	0.62	-0.0
3,185,895	-		LRK53_RS14540	0.62	-2.6
3,185,895	-		LRK53_RS14540	0.62	-1.8
3,185,895	-		LRK53_RS14540	0.62	-1.3
3,185,895	-		LRK53_RS14540	0.62	-0.8
3,185,978	+		LRK53_RS14540	0.83	-1.1
3,185,978	+		LRK53_RS14540	0.83	-0.8
3,185,978	+		LRK53_RS14540	0.83	-0.6
3,185,978	+		LRK53_RS14540	0.83	-1.2
3,185,978	+		LRK53_RS14540	0.83	-1.4
3,185,978	+		LRK53_RS14540	0.83	-0.3
3,185,978	+		LRK53_RS14540	0.83	-0.6
3,185,978	+		LRK53_RS14540	0.83	-0.0
3,185,978	+		LRK53_RS14540	0.83	-2.2
3,185,978	+		LRK53_RS14540	0.83	-1.6
3,185,978	+		LRK53_RS14540	0.83	+1.0
3,185,978	+		LRK53_RS14540	0.83	-0.0
3,185,978	+		LRK53_RS14540	0.83	-1.7
3,185,978	+		LRK53_RS14540	0.83	-1.1
3,185,978	+		LRK53_RS14540	0.83	-2.6
3,185,978	+		LRK53_RS14540	0.83	-1.3
3,185,979	-		LRK53_RS14540	0.83	-0.0
3,185,979	-		LRK53_RS14540	0.83	-2.5
3,185,979	-		LRK53_RS14540	0.83	-0.6
3,185,979	-		LRK53_RS14540	0.83	-1.4
3,185,979	-		LRK53_RS14540	0.83	-0.0
3,185,979	-		LRK53_RS14540	0.83	+1.2
3,185,979	-		LRK53_RS14540	0.83	-1.0
3,185,979	-		LRK53_RS14540	0.83	-0.6
3,185,979	-		LRK53_RS14540	0.83	-1.8
3,185,979	-		LRK53_RS14540	0.83	-1.0
3,185,979	-		LRK53_RS14540	0.83	-0.0
3,185,979	-		LRK53_RS14540	0.83	-1.0
3,185,979	-		LRK53_RS14540	0.83	-2.0
3,185,979	-		LRK53_RS14540	0.83	-0.0
3,185,979	-		LRK53_RS14540	0.83	-0.0
3,185,979	-		LRK53_RS14540	0.83	-3.0
3,185,984	+		LRK53_RS14540	0.84	-0.6
3,185,984	+		LRK53_RS14540	0.84	-1.0
3,185,984	+		LRK53_RS14540	0.84	+0.2
3,185,984	+		LRK53_RS14540	0.84	+2.0
3,185,984	+		LRK53_RS14540	0.84	+1.0
3,185,984	+		LRK53_RS14540	0.84	-0.5
3,185,984	+		LRK53_RS14540	0.84	+0.5
3,185,985	-		LRK53_RS14540	0.85	-0.6
3,185,985	-		LRK53_RS14540	0.85	+1.0
3,185,985	-		LRK53_RS14540	0.85	+0.5
3,185,985	-		LRK53_RS14540	0.85	-1.6
3,185,985	-		LRK53_RS14540	0.85	+1.0
3,185,985	-		LRK53_RS14540	0.85	-0.0
3,185,985	-		LRK53_RS14540	0.85	-0.4
3,185,985	-		LRK53_RS14540	0.85	+0.3
3,185,985	-		LRK53_RS14540	0.85	-1.0
3,185,985	-		LRK53_RS14540	0.85	+0.5
3,185,985	-		LRK53_RS14540	0.85	-1.1
3,185,985	-		LRK53_RS14540	0.85	-0.6
3,185,985	-		LRK53_RS14540	0.85	-1.4
3,186,004	+		LRK53_RS14540	0.89	-1.7
3,186,004	+		LRK53_RS14540	0.89	-0.6
3,186,004	+		LRK53_RS14540	0.89	-1.8
3,186,005	-		LRK53_RS14540	0.90	-0.6
3,186,176	-				+0.4
3,186,244	+		LRK53_RS14545	0.10	-0.6
3,186,245	-		LRK53_RS14545	0.10	-1.0
3,186,332	-		LRK53_RS14545	0.15	-1.3
3,186,332	-		LRK53_RS14545	0.15	-0.6
3,186,397	+		LRK53_RS14545	0.18	-1.4
3,186,397	+		LRK53_RS14545	0.18	-0.8
3,186,398	-		LRK53_RS14545	0.18	-0.7
3,186,398	-		LRK53_RS14545	0.18	+1.0
3,186,398	-		LRK53_RS14545	0.18	-0.6
3,186,556	+		LRK53_RS14545	0.26	+0.4
3,186,556	+		LRK53_RS14545	0.26	+1.0
3,186,556	+		LRK53_RS14545	0.26	+0.5
3,186,556	+		LRK53_RS14545	0.26	-0.9
3,186,557	-		LRK53_RS14545	0.26	-1.6
3,186,557	-		LRK53_RS14545	0.26	-0.0
3,186,557	-		LRK53_RS14545	0.26	-1.3
3,186,557	-		LRK53_RS14545	0.26	+2.0
3,186,857	-		LRK53_RS14545	0.42	-1.0
3,186,992	+		LRK53_RS14545	0.49	-0.6
3,186,993	-		LRK53_RS14545	0.49	-1.1
3,187,028	-		LRK53_RS14545	0.50	-0.0