Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14375

Experiment: R2A_PIPES no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES no stress control
3,148,211	+		LRK53_RS14360	0.38	-1.9
3,148,211	+		LRK53_RS14360	0.38	-0.1
3,148,211	+		LRK53_RS14360	0.38	-0.1
3,148,211	+		LRK53_RS14360	0.38	-0.1
3,148,211	+		LRK53_RS14360	0.38	-0.6
3,148,211	+		LRK53_RS14360	0.38	-0.9
3,148,211	+		LRK53_RS14360	0.38	-0.1
3,148,212	-		LRK53_RS14360	0.38	-0.6
3,148,212	-		LRK53_RS14360	0.38	-0.1
3,148,212	-		LRK53_RS14360	0.38	-0.4
3,148,212	-		LRK53_RS14360	0.38	-1.6
3,148,212	-		LRK53_RS14360	0.38	+0.2
3,148,212	-		LRK53_RS14360	0.38	+0.9
3,148,212	-		LRK53_RS14360	0.38	-0.6
3,148,355	+		LRK53_RS14360	0.89	+0.5
3,148,355	+		LRK53_RS14360	0.89	-0.9
3,148,355	+		LRK53_RS14360	0.89	-0.2
3,148,355	+		LRK53_RS14360	0.89	-1.1
3,148,355	+		LRK53_RS14360	0.89	+0.1
3,148,355	+		LRK53_RS14360	0.89	-0.6
3,148,355	+		LRK53_RS14360	0.89	-1.3
3,148,355	+		LRK53_RS14360	0.89	+0.7
3,148,356	-		LRK53_RS14360	0.90	-0.1
3,148,356	-		LRK53_RS14360	0.90	-1.9
3,148,356	-		LRK53_RS14360	0.90	-3.6
3,148,356	-		LRK53_RS14360	0.90	+0.3
3,148,356	-		LRK53_RS14360	0.90	-0.6
3,148,356	-		LRK53_RS14360	0.90	-1.1
3,148,356	-		LRK53_RS14360	0.90	-0.5
3,148,356	-		LRK53_RS14360	0.90	-1.4
3,148,382	+				-1.1
3,148,382	+				-0.9
3,148,383	-				-1.1
3,148,383	-				-1.1
3,148,391	+				-2.1
3,148,391	+				-1.9
3,148,391	+				-1.1
3,148,391	+				-0.1
3,148,391	+				+0.0
3,148,392	-				-0.4
3,148,392	-				-0.4
3,148,392	-				-1.5
3,148,432	+				-1.6
3,148,432	+				-0.1
3,148,437	+				-0.6
3,148,438	-				-1.9
3,148,438	-				-1.3
3,148,438	-				-1.4
3,148,438	-				-0.1
3,148,438	-				-1.4
3,148,486	+				-1.0
3,148,486	+				-2.1
3,148,486	+				-1.4
3,148,486	+				-0.1
3,148,486	+				+0.4
3,148,487	-				-0.6
3,148,487	-				-1.2
3,148,487	-				-1.0
3,148,487	-				+0.4
3,148,487	-				+0.9
3,148,586	-		LRK53_RS14365	0.36	-0.9
3,148,813	+				-1.1
3,148,813	+				-1.8
3,148,813	+				+0.1
3,148,813	+				-2.2
3,148,813	+				-0.6
3,148,813	+				-0.6
3,148,813	+				-1.6
3,148,813	+				-1.1
3,148,813	+				-0.1
3,148,814	-				-1.3
3,148,814	-				-0.6
3,148,814	-				-2.3
3,148,814	-				+0.5
3,148,814	-				-0.4
3,148,814	-				+0.9
3,148,814	-				-0.5
3,148,814	-				+2.5
3,148,989	-				-1.1
3,148,989	-				-1.8
3,148,989	-				+0.6
3,149,038	+				-2.5
3,149,038	+				-0.6
3,149,039	-				-0.6
3,149,039	-				-0.1
3,149,150	+				-0.1
3,149,150	+				-1.1
3,149,150	+				-0.3
3,149,150	+				-1.8
3,149,151	-				+0.9
3,149,151	-				-0.1
3,149,151	-				-1.4
3,149,151	-				+0.9
3,149,151	-				-0.6
3,149,151	-				-2.6
3,149,151	-				+0.4
3,149,151	-				-1.1
3,149,151	-				-0.1
3,149,151	-				-0.5
3,149,151	-				-0.6
3,149,151	-				+0.9
3,149,151	-				-0.9
3,149,151	-				-0.9
3,149,151	-				-0.4
3,149,151	-				-0.1
3,149,211	-				+1.5
3,149,666	+		LRK53_RS14375	0.30	-1.1
3,149,666	+		LRK53_RS14375	0.30	+0.9
3,149,667	-		LRK53_RS14375	0.30	-1.1
3,149,894	+		LRK53_RS14375	0.41	+0.9
3,149,918	+		LRK53_RS14375	0.42	-1.9
3,149,918	+		LRK53_RS14375	0.42	+0.9
3,149,918	+		LRK53_RS14375	0.42	-1.9
3,149,918	+		LRK53_RS14375	0.42	-0.4
3,149,918	+		LRK53_RS14375	0.42	+1.5
3,149,918	+		LRK53_RS14375	0.42	-1.6
3,149,918	+		LRK53_RS14375	0.42	-1.1
3,149,918	+		LRK53_RS14375	0.42	-0.1
3,149,918	+		LRK53_RS14375	0.42	+0.9
3,149,919	-		LRK53_RS14375	0.42	-0.6
3,149,919	-		LRK53_RS14375	0.42	-1.1
3,149,919	-		LRK53_RS14375	0.42	-1.4
3,149,919	-		LRK53_RS14375	0.42	+0.4
3,149,919	-		LRK53_RS14375	0.42	-0.6
3,149,919	-		LRK53_RS14375	0.42	-1.4
3,149,919	-		LRK53_RS14375	0.42	-0.1
3,149,919	-		LRK53_RS14375	0.42	+0.6
3,149,919	-		LRK53_RS14375	0.42	-0.6
3,149,919	-		LRK53_RS14375	0.42	+0.9
3,149,919	-		LRK53_RS14375	0.42	+0.4
3,150,038	+		LRK53_RS14375	0.48	-0.6
3,150,038	+		LRK53_RS14375	0.48	-0.1
3,150,038	+		LRK53_RS14375	0.48	-1.1
3,150,038	+		LRK53_RS14375	0.48	+0.4
3,150,039	-		LRK53_RS14375	0.48	+0.5
3,150,039	-		LRK53_RS14375	0.48	-1.1
3,150,039	-		LRK53_RS14375	0.48	+0.9
3,150,039	-		LRK53_RS14375	0.48	-0.1
3,150,107	+		LRK53_RS14375	0.51	-2.2
3,150,165	-		LRK53_RS14375	0.54	-1.4
3,150,165	-		LRK53_RS14375	0.54	-0.3
3,150,165	-		LRK53_RS14375	0.54	-0.6
3,150,266	+		LRK53_RS14375	0.59	+0.9
3,150,266	+		LRK53_RS14375	0.59	-1.6
3,150,266	+		LRK53_RS14375	0.59	+0.9
3,150,266	+		LRK53_RS14375	0.59	-0.1
3,150,266	+		LRK53_RS14375	0.59	-0.6
3,150,266	+		LRK53_RS14375	0.59	-0.6
3,150,267	-		LRK53_RS14375	0.59	+0.4
3,150,267	-		LRK53_RS14375	0.59	-0.5
3,150,267	-		LRK53_RS14375	0.59	-2.1
3,150,267	-		LRK53_RS14375	0.59	-1.9
3,150,267	-		LRK53_RS14375	0.59	-1.4
3,150,267	-		LRK53_RS14375	0.59	-0.1
3,150,272	+		LRK53_RS14375	0.60	-1.1
3,150,272	+		LRK53_RS14375	0.60	-0.3
3,150,272	+		LRK53_RS14375	0.60	-0.1
3,150,273	-		LRK53_RS14375	0.60	-0.9
3,150,273	-		LRK53_RS14375	0.60	+0.9
3,150,273	-		LRK53_RS14375	0.60	+0.9
3,150,368	+		LRK53_RS14375	0.64	+0.9
3,150,512	+		LRK53_RS14375	0.71	-2.0
3,150,548	+		LRK53_RS14375	0.73	+0.5
3,150,548	+		LRK53_RS14375	0.73	+0.4
3,150,548	+		LRK53_RS14375	0.73	-0.1
3,150,548	+		LRK53_RS14375	0.73	-3.3
3,150,548	+		LRK53_RS14375	0.73	-2.1
3,150,549	-		LRK53_RS14375	0.73	-0.4
3,150,549	-		LRK53_RS14375	0.73	-0.1
3,150,549	-		LRK53_RS14375	0.73	-0.6
3,150,549	-		LRK53_RS14375	0.73	-1.2
3,150,549	-		LRK53_RS14375	0.73	-0.6
3,150,549	-		LRK53_RS14375	0.73	-0.6
3,150,549	-		LRK53_RS14375	0.73	-2.8
3,150,549	-		LRK53_RS14375	0.73	+0.4
3,150,549	-		LRK53_RS14375	0.73	-1.1
3,150,549	-		LRK53_RS14375	0.73	-1.2
3,150,549	-		LRK53_RS14375	0.73	-1.9
3,150,549	-		LRK53_RS14375	0.73	-0.1
3,150,549	-		LRK53_RS14375	0.73	+0.9
3,150,549	-		LRK53_RS14375	0.73	-0.6
3,150,549	-		LRK53_RS14375	0.73	+0.9
3,150,629	+		LRK53_RS14375	0.77	-2.5
3,150,629	+		LRK53_RS14375	0.77	-1.1
3,150,629	+		LRK53_RS14375	0.77	-1.6
3,150,629	+		LRK53_RS14375	0.77	-0.1
3,150,630	-		LRK53_RS14375	0.77	-0.6
3,150,630	-		LRK53_RS14375	0.77	-0.1
3,150,630	-		LRK53_RS14375	0.77	-0.6
3,150,653	+		LRK53_RS14375	0.78	-1.1
3,150,653	+		LRK53_RS14375	0.78	-1.9
3,150,653	+		LRK53_RS14375	0.78	-1.6
3,150,654	-		LRK53_RS14375	0.78	-0.1
3,150,654	-		LRK53_RS14375	0.78	-0.1
3,150,788	+		LRK53_RS14375	0.85	-0.1
3,150,788	+		LRK53_RS14375	0.85	+0.4
3,150,788	+		LRK53_RS14375	0.85	-0.1
3,150,788	+		LRK53_RS14375	0.85	-0.1
3,150,788	+		LRK53_RS14375	0.85	-1.9
3,150,789	-		LRK53_RS14375	0.85	-0.8
3,150,789	-		LRK53_RS14375	0.85	-2.2
3,150,803	+		LRK53_RS14375	0.86	-1.6
3,150,803	+		LRK53_RS14375	0.86	-1.1
3,150,804	-		LRK53_RS14375	0.86	-1.1
3,150,804	-		LRK53_RS14375	0.86	+0.9
3,150,804	-		LRK53_RS14375	0.86	-1.4
3,150,806	+		LRK53_RS14375	0.86	-2.4
3,150,806	+		LRK53_RS14375	0.86	+0.9
3,150,807	-		LRK53_RS14375	0.86	+1.9
3,150,807	-		LRK53_RS14375	0.86	-1.6
3,150,807	-		LRK53_RS14375	0.86	-0.9
3,150,807	-		LRK53_RS14375	0.86	-0.9
3,150,812	+		LRK53_RS14375	0.86	-2.3
3,150,812	+		LRK53_RS14375	0.86	-0.1
3,150,812	+		LRK53_RS14375	0.86	-1.4
3,150,813	-		LRK53_RS14375	0.86	+0.9
3,150,815	+		LRK53_RS14375	0.86	+0.9
3,150,815	+		LRK53_RS14375	0.86	-0.6
3,150,815	+		LRK53_RS14375	0.86	-1.5
3,150,816	-		LRK53_RS14375	0.86	-1.4
3,150,816	-		LRK53_RS14375	0.86	-0.1
3,150,816	-		LRK53_RS14375	0.86	+1.9
3,150,816	-		LRK53_RS14375	0.86	-0.6
3,150,816	-		LRK53_RS14375	0.86	+1.9
3,150,827	+		LRK53_RS14375	0.87	-0.4
3,150,827	+		LRK53_RS14375	0.87	+0.9
3,150,828	-		LRK53_RS14375	0.87	-1.6
3,150,828	-		LRK53_RS14375	0.87	-3.2
3,150,828	-		LRK53_RS14375	0.87	-0.1
3,150,828	-		LRK53_RS14375	0.87	-0.1
3,150,950	+				+0.4
3,150,950	+				-0.6
3,150,950	+				-1.2
3,150,950	+				-0.6
3,150,950	+				-0.2
3,150,950	+				-0.1
3,150,950	+				+0.9
3,150,950	+				-0.9
3,150,950	+				-0.1
3,150,950	+				-0.1
3,150,950	+				+0.9
3,150,951	-				-1.2
3,150,951	-				-1.6
3,150,951	-				-0.6
3,151,121	+				-1.2
3,151,122	-				+0.5
3,151,122	-				+0.9
3,151,206	+				-0.6
3,151,206	+				-0.6
3,151,206	+				+0.4
3,151,206	+				-0.7
3,151,206	+				+0.2
3,151,206	+				-1.1
3,151,206	+				-0.6
3,151,207	-				-1.4
3,151,207	-				-1.1
3,151,207	-				+2.5
3,151,207	-				+0.9
3,151,207	-				-0.7
3,151,867	+				+0.9
3,151,867	+				-1.1
3,151,867	+				-1.1
3,151,867	+				+0.9
3,151,867	+				-1.6
3,151,867	+				+0.4
3,151,867	+				-0.4
3,151,868	-				-1.4
3,151,868	-				-2.6
3,151,868	-				+0.1
3,151,868	-				-1.6
3,151,868	-				-0.8
3,151,868	-				-0.9
3,151,868	-				-0.1
3,151,868	-				+0.2
3,151,884	+				-2.0
3,151,884	+				+0.9
3,151,884	+				-0.1
3,151,884	+				+0.9
3,151,884	+				+0.9
3,151,884	+				+0.4
3,151,884	+				-0.1
3,151,885	-				-0.5
3,151,885	-				-0.5
3,151,885	-				-1.2
3,151,885	-				-0.1
3,151,885	-				-0.8
3,152,078	+		LRK53_RS14385	0.22	-0.3
3,152,078	+		LRK53_RS14385	0.22	-0.6
3,152,079	-		LRK53_RS14385	0.22	+0.9
3,152,079	-		LRK53_RS14385	0.22	-0.6