Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10140

Experiment: R2A_PIPES no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES no stress control
2,265,698	-		LRK53_RS10130	0.63	+0.9
2,265,748	+		LRK53_RS10130	0.65	+0.9
2,265,748	+		LRK53_RS10130	0.65	-0.7
2,265,748	+		LRK53_RS10130	0.65	-1.2
2,265,748	+		LRK53_RS10130	0.65	+0.9
2,265,748	+		LRK53_RS10130	0.65	-0.7
2,265,748	+		LRK53_RS10130	0.65	-0.9
2,265,748	+		LRK53_RS10130	0.65	+1.9
2,265,749	-		LRK53_RS10130	0.65	-0.7
2,265,749	-		LRK53_RS10130	0.65	-1.1
2,265,749	-		LRK53_RS10130	0.65	-1.1
2,265,749	-		LRK53_RS10130	0.65	-0.2
2,265,749	-		LRK53_RS10130	0.65	-0.7
2,265,758	-		LRK53_RS10130	0.66	-0.2
2,265,760	+		LRK53_RS10130	0.66	+0.9
2,265,760	+		LRK53_RS10130	0.66	-1.2
2,265,760	+		LRK53_RS10130	0.66	-0.9
2,266,194	+		LRK53_RS10130	0.87	-1.4
2,266,195	-		LRK53_RS10130	0.87	-1.4
2,266,195	-		LRK53_RS10130	0.87	-0.3
2,266,195	-		LRK53_RS10130	0.87	-1.7
2,266,195	-		LRK53_RS10130	0.87	-1.7
2,266,195	-		LRK53_RS10130	0.87	-0.2
2,266,195	-		LRK53_RS10130	0.87	-0.7
2,266,350	+				-2.1
2,266,521	-		LRK53_RS10135	0.50	-0.9
2,266,754	+				-0.1
2,266,754	+				+1.5
2,266,755	-				-1.3
2,266,755	-				-0.9
2,266,838	-		LRK53_RS10140	0.14	-0.7
2,266,861	+		LRK53_RS10140	0.16	-1.0
2,266,861	+		LRK53_RS10140	0.16	+2.5
2,266,861	+		LRK53_RS10140	0.16	-1.7
2,266,861	+		LRK53_RS10140	0.16	-1.7
2,266,870	+		LRK53_RS10140	0.17	+0.9
2,266,871	-		LRK53_RS10140	0.17	+0.3
2,266,871	-		LRK53_RS10140	0.17	-1.1
2,266,909	+		LRK53_RS10140	0.21	-1.1
2,266,909	+		LRK53_RS10140	0.21	-2.8
2,266,910	-		LRK53_RS10140	0.21	-0.6
2,266,910	-		LRK53_RS10140	0.21	-0.3
2,266,910	-		LRK53_RS10140	0.21	-0.7
2,266,910	-		LRK53_RS10140	0.21	-2.3
2,266,910	-		LRK53_RS10140	0.21	-0.1
2,266,910	-		LRK53_RS10140	0.21	-0.7
2,266,910	-		LRK53_RS10140	0.21	-1.4
2,266,910	-		LRK53_RS10140	0.21	+2.9
2,266,933	+		LRK53_RS10140	0.23	-1.7
2,266,933	+		LRK53_RS10140	0.23	-0.2
2,266,933	+		LRK53_RS10140	0.23	-2.5
2,266,933	+		LRK53_RS10140	0.23	-0.7
2,266,933	+		LRK53_RS10140	0.23	-1.4
2,266,934	-		LRK53_RS10140	0.23	-1.4
2,266,936	+		LRK53_RS10140	0.23	-1.4
2,266,936	+		LRK53_RS10140	0.23	-0.4
2,266,936	+		LRK53_RS10140	0.23	-1.0
2,266,936	+		LRK53_RS10140	0.23	+0.3
2,266,936	+		LRK53_RS10140	0.23	-1.4
2,266,936	+		LRK53_RS10140	0.23	-0.4
2,266,936	+		LRK53_RS10140	0.23	+0.9
2,266,936	+		LRK53_RS10140	0.23	-1.4
2,266,936	+		LRK53_RS10140	0.23	-0.1
2,266,936	+		LRK53_RS10140	0.23	+0.9
2,266,936	+		LRK53_RS10140	0.23	-1.1
2,266,937	-		LRK53_RS10140	0.23	+0.9
2,266,937	-		LRK53_RS10140	0.23	-0.7
2,266,937	-		LRK53_RS10140	0.23	-0.1
2,266,937	-		LRK53_RS10140	0.23	-1.1
2,266,937	-		LRK53_RS10140	0.23	-0.6
2,266,937	-		LRK53_RS10140	0.23	-0.1
2,266,937	-		LRK53_RS10140	0.23	+0.3
2,266,937	-		LRK53_RS10140	0.23	-1.7
2,266,937	-		LRK53_RS10140	0.23	+1.9
2,266,939	+		LRK53_RS10140	0.23	-1.3
2,266,939	+		LRK53_RS10140	0.23	-2.3
2,266,948	+		LRK53_RS10140	0.24	-1.0
2,266,948	+		LRK53_RS10140	0.24	-0.4
2,266,948	+		LRK53_RS10140	0.24	-0.7
2,266,948	+		LRK53_RS10140	0.24	-0.9
2,266,948	+		LRK53_RS10140	0.24	-1.9
2,266,948	+		LRK53_RS10140	0.24	+0.6
2,266,948	+		LRK53_RS10140	0.24	-1.5
2,266,948	+		LRK53_RS10140	0.24	-0.9
2,266,948	+		LRK53_RS10140	0.24	+0.9
2,266,948	+		LRK53_RS10140	0.24	-1.1
2,266,948	+		LRK53_RS10140	0.24	-1.1
2,266,949	-		LRK53_RS10140	0.24	-1.0
2,266,949	-		LRK53_RS10140	0.24	-0.4
2,266,949	-		LRK53_RS10140	0.24	-1.4
2,266,949	-		LRK53_RS10140	0.24	-0.8
2,266,949	-		LRK53_RS10140	0.24	-1.4
2,266,949	-		LRK53_RS10140	0.24	-0.6
2,266,949	-		LRK53_RS10140	0.24	+0.1
2,267,083	+		LRK53_RS10140	0.37	+0.9
2,267,084	-		LRK53_RS10140	0.37	-0.9
2,267,125	+		LRK53_RS10140	0.41	-1.4
2,267,125	+		LRK53_RS10140	0.41	-0.1
2,267,125	+		LRK53_RS10140	0.41	-0.7
2,267,125	+		LRK53_RS10140	0.41	-1.6
2,267,125	+		LRK53_RS10140	0.41	-0.5
2,267,125	+		LRK53_RS10140	0.41	-0.8
2,267,125	+		LRK53_RS10140	0.41	+0.9
2,267,126	-		LRK53_RS10140	0.41	-1.1
2,267,126	-		LRK53_RS10140	0.41	-0.6
2,267,126	-		LRK53_RS10140	0.41	-2.3
2,267,126	-		LRK53_RS10140	0.41	-1.9
2,267,194	+		LRK53_RS10140	0.48	-1.0
2,267,194	+		LRK53_RS10140	0.48	-0.6
2,267,194	+		LRK53_RS10140	0.48	-0.7
2,267,194	+		LRK53_RS10140	0.48	-0.5
2,267,194	+		LRK53_RS10140	0.48	-0.7
2,267,195	-		LRK53_RS10140	0.48	-1.3
2,267,195	-		LRK53_RS10140	0.48	+0.3
2,267,240	+		LRK53_RS10140	0.52	-1.4
2,267,377	+		LRK53_RS10140	0.66	-1.2
2,267,377	+		LRK53_RS10140	0.66	-0.7
2,267,378	-		LRK53_RS10140	0.66	-1.1
2,267,378	-		LRK53_RS10140	0.66	+0.4
2,267,378	-		LRK53_RS10140	0.66	-1.4
2,267,435	-		LRK53_RS10140	0.71	-1.1
2,267,467	+		LRK53_RS10140	0.74	-1.4
2,267,468	-		LRK53_RS10140	0.74	-1.5
2,267,468	-		LRK53_RS10140	0.74	+0.3
2,267,694	+				-0.6
2,267,695	-				-1.1
2,267,695	-				+0.1
2,267,695	-				+2.5
2,267,695	-				-0.7
2,267,695	-				-0.7
2,268,060	-				-0.7
2,268,123	+				-0.1
2,268,123	+				-1.4
2,268,124	-				-1.4
2,268,162	+				-0.4
2,268,162	+				-1.9
2,268,163	-				-0.7
2,268,163	-				-1.7
2,268,163	-				-0.4
2,268,163	-				+0.9
2,268,163	-				-0.7
2,268,163	-				+0.6
2,268,264	+		LRK53_RS10150	0.14	-1.1
2,268,264	+		LRK53_RS10150	0.14	+0.6
2,268,264	+		LRK53_RS10150	0.14	+0.3
2,268,264	+		LRK53_RS10150	0.14	+0.9
2,268,265	-		LRK53_RS10150	0.14	-0.1
2,268,265	-		LRK53_RS10150	0.14	-0.1
2,268,265	-		LRK53_RS10150	0.14	-1.4
2,268,265	-		LRK53_RS10150	0.14	+0.9
2,268,265	-		LRK53_RS10150	0.14	-0.3
2,268,300	+		LRK53_RS10150	0.17	+0.2
2,268,301	-		LRK53_RS10150	0.17	-0.7
2,268,360	+		LRK53_RS10150	0.21	-1.1
2,268,360	+		LRK53_RS10150	0.21	+1.5
2,268,360	+		LRK53_RS10150	0.21	+0.4
2,268,361	-		LRK53_RS10150	0.21	-1.0
2,268,361	-		LRK53_RS10150	0.21	-0.6
2,268,361	-		LRK53_RS10150	0.21	-0.7
2,268,361	-		LRK53_RS10150	0.21	-0.7
2,268,361	-		LRK53_RS10150	0.21	-0.4
2,268,426	+		LRK53_RS10150	0.25	-1.9
2,268,427	-		LRK53_RS10150	0.25	-0.1
2,268,537	+		LRK53_RS10150	0.32	-0.7
2,268,538	-		LRK53_RS10150	0.32	-0.1
2,268,538	-		LRK53_RS10150	0.32	-1.0
2,268,566	+		LRK53_RS10150	0.34	-1.7
2,268,567	-		LRK53_RS10150	0.34	-0.7
2,268,567	-		LRK53_RS10150	0.34	+0.2
2,268,579	+		LRK53_RS10150	0.35	-0.2
2,268,579	+		LRK53_RS10150	0.35	-1.4
2,268,579	+		LRK53_RS10150	0.35	-0.7
2,268,579	+		LRK53_RS10150	0.35	-1.2
2,268,579	+		LRK53_RS10150	0.35	-0.1
2,268,580	-		LRK53_RS10150	0.35	+0.5
2,268,580	-		LRK53_RS10150	0.35	-0.1
2,268,580	-		LRK53_RS10150	0.35	-1.3
2,268,580	-		LRK53_RS10150	0.35	-0.1
2,268,580	-		LRK53_RS10150	0.35	-1.1
2,268,580	-		LRK53_RS10150	0.35	-0.5
2,268,594	+		LRK53_RS10150	0.36	-1.7
2,268,594	+		LRK53_RS10150	0.36	-0.5
2,268,615	+		LRK53_RS10150	0.37	+0.9
2,268,616	-		LRK53_RS10150	0.37	+1.9
2,268,616	-		LRK53_RS10150	0.37	-1.1
2,268,681	+		LRK53_RS10150	0.41	-2.4
2,268,681	+		LRK53_RS10150	0.41	-0.7
2,268,682	-		LRK53_RS10150	0.41	-0.1
2,268,682	-		LRK53_RS10150	0.41	-0.1
2,268,682	-		LRK53_RS10150	0.41	-0.9
2,268,682	-		LRK53_RS10150	0.41	-2.0
2,268,682	-		LRK53_RS10150	0.41	-1.2
2,268,685	+		LRK53_RS10150	0.41	-0.1
2,268,685	+		LRK53_RS10150	0.41	-1.8
2,268,685	+		LRK53_RS10150	0.41	-0.1
2,268,685	+		LRK53_RS10150	0.41	-0.9
2,268,685	+		LRK53_RS10150	0.41	-2.0
2,268,685	+		LRK53_RS10150	0.41	-1.1
2,268,685	+		LRK53_RS10150	0.41	-0.7
2,268,685	+		LRK53_RS10150	0.41	-0.2
2,268,685	+		LRK53_RS10150	0.41	+0.2
2,268,685	+		LRK53_RS10150	0.41	+0.3
2,268,685	+		LRK53_RS10150	0.41	-0.1
2,268,685	+		LRK53_RS10150	0.41	-0.9
2,268,685	+		LRK53_RS10150	0.41	-0.1
2,268,685	+		LRK53_RS10150	0.41	-0.8
2,268,686	-		LRK53_RS10150	0.41	-0.8
2,268,686	-		LRK53_RS10150	0.41	-0.2
2,268,686	-		LRK53_RS10150	0.41	-1.1
2,268,686	-		LRK53_RS10150	0.41	+0.2
2,268,686	-		LRK53_RS10150	0.41	-1.9
2,268,686	-		LRK53_RS10150	0.41	-0.1
2,268,686	-		LRK53_RS10150	0.41	-2.0
2,268,686	-		LRK53_RS10150	0.41	-1.1
2,268,686	-		LRK53_RS10150	0.41	-0.9
2,268,686	-		LRK53_RS10150	0.41	-1.3
2,268,686	-		LRK53_RS10150	0.41	-2.6
2,268,686	-		LRK53_RS10150	0.41	-2.3
2,268,686	-		LRK53_RS10150	0.41	-1.4
2,268,686	-		LRK53_RS10150	0.41	-0.4
2,268,686	-		LRK53_RS10150	0.41	-1.9