Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS06540

Experiment: R2A_PIPES no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES no stress control
1,478,561	+		LRK53_RS06530	0.78	+0.9
1,478,561	+		LRK53_RS06530	0.78	+0.5
1,478,562	-		LRK53_RS06530	0.79	-0.9
1,478,562	-		LRK53_RS06530	0.79	-0.4
1,478,562	-		LRK53_RS06530	0.79	+0.4
1,478,562	-		LRK53_RS06530	0.79	-1.4
1,478,562	-		LRK53_RS06530	0.79	-1.4
1,478,562	-		LRK53_RS06530	0.79	+0.2
1,478,562	-		LRK53_RS06530	0.79	-0.6
1,478,562	-		LRK53_RS06530	0.79	-1.3
1,478,562	-		LRK53_RS06530	0.79	-0.1
1,478,564	+		LRK53_RS06530	0.79	+0.4
1,478,564	+		LRK53_RS06530	0.79	-0.6
1,478,564	+		LRK53_RS06530	0.79	-1.7
1,478,564	+		LRK53_RS06530	0.79	-0.1
1,478,564	+		LRK53_RS06530	0.79	-1.6
1,478,564	+		LRK53_RS06530	0.79	-0.9
1,478,564	+		LRK53_RS06530	0.79	-1.6
1,478,564	+		LRK53_RS06530	0.79	-1.8
1,478,565	-		LRK53_RS06530	0.79	+0.9
1,478,565	-		LRK53_RS06530	0.79	-0.5
1,478,565	-		LRK53_RS06530	0.79	-0.6
1,478,565	-		LRK53_RS06530	0.79	-0.1
1,478,565	-		LRK53_RS06530	0.79	-0.9
1,478,565	-		LRK53_RS06530	0.79	-1.1
1,478,565	-		LRK53_RS06530	0.79	-0.9
1,478,565	-		LRK53_RS06530	0.79	-1.8
1,478,565	-		LRK53_RS06530	0.79	-2.6
1,478,788	-		LRK53_RS06535	0.18	+0.9
1,478,788	-		LRK53_RS06535	0.18	+0.2
1,478,788	-		LRK53_RS06535	0.18	-1.6
1,478,788	-		LRK53_RS06535	0.18	-0.2
1,478,845	+		LRK53_RS06535	0.26	-1.4
1,478,845	+		LRK53_RS06535	0.26	-0.9
1,478,866	-		LRK53_RS06535	0.29	+0.2
1,479,129	+		LRK53_RS06535	0.66	+0.9
1,479,130	-		LRK53_RS06535	0.66	+0.3
1,479,130	-		LRK53_RS06535	0.66	-0.8
1,479,243	+		LRK53_RS06535	0.81	-1.6
1,479,243	+		LRK53_RS06535	0.81	+0.9
1,479,244	-		LRK53_RS06535	0.82	+0.9
1,479,244	-		LRK53_RS06535	0.82	-0.6
1,479,244	-		LRK53_RS06535	0.82	-0.1
1,479,244	-		LRK53_RS06535	0.82	+0.9
1,479,244	-		LRK53_RS06535	0.82	-0.6
1,479,244	-		LRK53_RS06535	0.82	-0.7
1,479,244	-		LRK53_RS06535	0.82	+0.9
1,479,263	-		LRK53_RS06535	0.84	-1.2
1,479,263	-		LRK53_RS06535	0.84	+0.5
1,479,503	+				-1.6
1,479,503	+				-0.1
1,479,503	+				-0.6
1,479,504	-				-1.9
1,479,505	+				+1.9
1,479,506	-				-0.1
1,479,506	-				-0.6
1,479,506	-				+0.2
1,479,506	-				-1.1
1,479,506	-				-1.3
1,479,529	+				+0.9
1,479,530	-				-0.1
1,479,530	-				-1.4
1,479,530	-				+0.3
1,479,643	+				+0.4
1,479,644	-				+1.9
1,479,658	+				-0.6
1,479,658	+				-1.6
1,479,658	+				-1.1
1,479,658	+				+0.9
1,479,658	+				-1.1
1,479,658	+				+0.4
1,479,659	-				+0.5
1,479,659	-				-0.6
1,479,659	-				-0.1
1,479,659	-				+0.9
1,479,659	-				-0.6
1,479,659	-				-0.1
1,479,659	-				-2.3
1,479,659	-				-2.2
1,479,659	-				-0.1
1,479,659	-				-0.6
1,479,659	-				-0.8
1,479,659	-				+0.4
1,479,659	-				-1.1
1,479,659	-				-0.1
1,480,054	+		LRK53_RS06540	0.35	-1.1
1,480,054	+		LRK53_RS06540	0.35	-1.1
1,480,054	+		LRK53_RS06540	0.35	-0.9
1,480,054	+		LRK53_RS06540	0.35	-0.1
1,480,054	+		LRK53_RS06540	0.35	-1.1
1,480,055	-		LRK53_RS06540	0.35	-1.6
1,480,055	-		LRK53_RS06540	0.35	-0.1
1,480,055	-		LRK53_RS06540	0.35	-1.1
1,480,114	+		LRK53_RS06540	0.39	-0.1
1,480,114	+		LRK53_RS06540	0.39	-1.1
1,480,114	+		LRK53_RS06540	0.39	-2.9
1,480,114	+		LRK53_RS06540	0.39	+0.4
1,480,114	+		LRK53_RS06540	0.39	-0.6
1,480,114	+		LRK53_RS06540	0.39	-0.1
1,480,115	-		LRK53_RS06540	0.39	-0.9
1,480,115	-		LRK53_RS06540	0.39	-1.4
1,480,115	-		LRK53_RS06540	0.39	+0.9
1,480,115	-		LRK53_RS06540	0.39	-0.4
1,480,115	-		LRK53_RS06540	0.39	+1.5
1,480,115	-		LRK53_RS06540	0.39	-1.1
1,480,115	-		LRK53_RS06540	0.39	-0.1
1,480,115	-		LRK53_RS06540	0.39	-0.4
1,480,115	-		LRK53_RS06540	0.39	+0.9
1,480,115	-		LRK53_RS06540	0.39	-0.1
1,480,180	+		LRK53_RS06540	0.43	-0.1
1,480,180	+		LRK53_RS06540	0.43	-0.6
1,480,181	-		LRK53_RS06540	0.43	-1.4
1,480,181	-		LRK53_RS06540	0.43	-0.6
1,480,330	+		LRK53_RS06540	0.53	-0.4
1,480,330	+		LRK53_RS06540	0.53	-0.4
1,480,330	+		LRK53_RS06540	0.53	-0.1
1,480,331	-		LRK53_RS06540	0.53	+1.9
1,480,331	-		LRK53_RS06540	0.53	-1.6
1,480,331	-		LRK53_RS06540	0.53	-1.6
1,480,331	-		LRK53_RS06540	0.53	-0.9
1,480,361	-		LRK53_RS06540	0.56	-1.3
1,480,361	-		LRK53_RS06540	0.56	-0.1
1,480,361	-		LRK53_RS06540	0.56	+0.4
1,480,423	+		LRK53_RS06540	0.60	-1.1
1,480,480	+		LRK53_RS06540	0.64	-0.6
1,480,480	+		LRK53_RS06540	0.64	-1.5
1,480,481	-		LRK53_RS06540	0.64	+0.9
1,480,481	-		LRK53_RS06540	0.64	-1.0
1,480,513	+		LRK53_RS06540	0.66	-0.1
1,480,684	+		LRK53_RS06540	0.77	+0.1
1,480,684	+		LRK53_RS06540	0.77	-1.0
1,480,684	+		LRK53_RS06540	0.77	-0.6
1,480,684	+		LRK53_RS06540	0.77	-1.2
1,480,816	+		LRK53_RS06540	0.86	-2.0
1,480,816	+		LRK53_RS06540	0.86	-0.6
1,480,816	+		LRK53_RS06540	0.86	+0.4
1,480,817	-		LRK53_RS06540	0.86	-1.8
1,480,817	-		LRK53_RS06540	0.86	-0.4
1,480,817	-		LRK53_RS06540	0.86	-1.1
1,480,964	+				-0.6
1,480,964	+				-0.6
1,480,964	+				+0.5
1,480,964	+				-0.2
1,480,964	+				-1.4
1,480,964	+				-0.1
1,480,964	+				+0.9
1,480,964	+				-1.6
1,480,965	-				-0.3
1,480,965	-				-0.4
1,480,965	-				+0.5
1,480,965	-				+2.5
1,480,965	-				-0.6
1,480,965	-				+1.9
1,480,965	-				-1.1
1,480,965	-				-1.4
1,480,965	-				-1.4
1,480,965	-				-1.4
1,480,965	-				-0.1
1,480,965	-				-0.4
1,480,965	-				-1.4
1,480,965	-				-0.1
1,480,965	-				+1.5
1,480,965	-				+0.4
1,480,965	-				-0.6
1,480,965	-				+0.2
1,480,987	+				+0.9
1,480,987	+				-1.5
1,480,987	+				+0.9
1,480,988	-				-0.1
1,480,988	-				-2.2
1,480,988	-				-0.4
1,481,020	+				-1.4
1,481,020	+				-0.9
1,481,020	+				-0.6
1,481,020	+				-1.9
1,481,020	+				-0.1
1,481,020	+				-1.6
1,481,021	-				-0.1
1,481,332	-				-1.1
1,481,587	+		LRK53_RS06545	0.13	-0.6
1,481,587	+		LRK53_RS06545	0.13	+0.9
1,481,588	-		LRK53_RS06545	0.13	+0.9
1,481,969	-		LRK53_RS06545	0.23	-0.1