Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05330

Experiment: R2A_PIPES no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES no stress control
1,247,182	+		LRK53_RS05320	0.13	-1.0
1,247,305	+		LRK53_RS05320	0.29	+0.9
1,247,306	-		LRK53_RS05320	0.29	-0.7
1,247,306	-		LRK53_RS05320	0.29	-0.7
1,247,378	-		LRK53_RS05320	0.38	-1.4
1,247,524	+		LRK53_RS05320	0.56	-1.9
1,247,524	+		LRK53_RS05320	0.56	+1.9
1,247,525	-		LRK53_RS05320	0.56	-0.1
1,247,525	-		LRK53_RS05320	0.56	-1.9
1,247,537	+		LRK53_RS05320	0.57	-1.1
1,247,537	+		LRK53_RS05320	0.57	-1.4
1,247,537	+		LRK53_RS05320	0.57	+0.5
1,247,537	+		LRK53_RS05320	0.57	-0.7
1,247,537	+		LRK53_RS05320	0.57	-0.7
1,247,537	+		LRK53_RS05320	0.57	-0.3
1,247,537	+		LRK53_RS05320	0.57	+0.2
1,247,538	-		LRK53_RS05320	0.57	-0.9
1,247,538	-		LRK53_RS05320	0.57	-1.1
1,247,538	-		LRK53_RS05320	0.57	-0.1
1,247,538	-		LRK53_RS05320	0.57	-0.1
1,247,538	-		LRK53_RS05320	0.57	-0.3
1,247,587	+		LRK53_RS05320	0.63	-0.8
1,247,588	-		LRK53_RS05320	0.63	-1.0
1,247,997	+		LRK53_RS05325	0.14	-1.5
1,247,997	+		LRK53_RS05325	0.14	-1.7
1,247,997	+		LRK53_RS05325	0.14	-0.1
1,247,997	+		LRK53_RS05325	0.14	+0.9
1,247,998	-		LRK53_RS05325	0.15	+0.0
1,248,024	-		LRK53_RS05325	0.28	-1.3
1,248,033	+		LRK53_RS05325	0.33	+0.9
1,248,033	+		LRK53_RS05325	0.33	+0.3
1,248,033	+		LRK53_RS05325	0.33	-0.2
1,248,034	-		LRK53_RS05325	0.33	-0.8
1,248,034	-		LRK53_RS05325	0.33	+1.7
1,248,034	-		LRK53_RS05325	0.33	-1.4
1,248,034	-		LRK53_RS05325	0.33	-1.1
1,248,034	-		LRK53_RS05325	0.33	-0.8
1,248,081	+		LRK53_RS05325	0.57	+2.5
1,248,081	+		LRK53_RS05325	0.57	-2.1
1,248,081	+		LRK53_RS05325	0.57	+0.9
1,248,081	+		LRK53_RS05325	0.57	-1.4
1,248,081	+		LRK53_RS05325	0.57	-0.7
1,248,081	+		LRK53_RS05325	0.57	-0.4
1,248,081	+		LRK53_RS05325	0.57	+0.9
1,248,081	+		LRK53_RS05325	0.57	-0.8
1,248,081	+		LRK53_RS05325	0.57	-0.7
1,248,081	+		LRK53_RS05325	0.57	+0.9
1,248,082	-		LRK53_RS05325	0.58	-0.1
1,248,082	-		LRK53_RS05325	0.58	-0.7
1,248,082	-		LRK53_RS05325	0.58	-0.2
1,248,082	-		LRK53_RS05325	0.58	+0.6
1,248,082	-		LRK53_RS05325	0.58	-1.4
1,248,082	-		LRK53_RS05325	0.58	-0.5
1,248,082	-		LRK53_RS05325	0.58	-0.1
1,248,082	-		LRK53_RS05325	0.58	-0.3
1,248,082	-		LRK53_RS05325	0.58	+0.1
1,248,082	-		LRK53_RS05325	0.58	-0.7
1,248,082	-		LRK53_RS05325	0.58	-1.0
1,248,082	-		LRK53_RS05325	0.58	-0.4
1,248,082	-		LRK53_RS05325	0.58	+0.4
1,248,082	-		LRK53_RS05325	0.58	+0.2
1,248,090	+		LRK53_RS05325	0.62	-0.7
1,248,091	-		LRK53_RS05325	0.63	-1.4
1,248,091	-		LRK53_RS05325	0.63	-0.1
1,248,202	+				-0.7
1,248,202	+				-0.7
1,248,202	+				-1.4
1,248,202	+				-0.6
1,248,202	+				+0.5
1,248,202	+				-0.7
1,248,202	+				-1.0
1,248,202	+				-0.9
1,248,202	+				-0.5
1,248,202	+				-0.8
1,248,202	+				-1.7
1,248,202	+				+1.9
1,248,202	+				-0.1
1,248,202	+				-0.5
1,248,202	+				-1.4
1,248,203	-				+0.2
1,248,203	-				-2.2
1,248,203	-				-0.7
1,248,203	-				+0.2
1,248,203	-				-0.7
1,248,203	-				-0.9
1,248,203	-				-1.1
1,248,203	-				-0.9
1,248,203	-				-1.2
1,248,203	-				-0.9
1,248,203	-				-2.1
1,248,203	-				-0.1
1,248,203	-				-0.7
1,248,203	-				-0.7
1,248,203	-				-2.9
1,248,203	-				-0.7
1,248,203	-				-1.1
1,248,203	-				-0.7
1,248,203	-				+0.9
1,248,203	-				-1.9
1,248,203	-				-0.5
1,248,322	+				-2.0
1,248,323	-				+0.0
1,248,323	-				-0.1
1,248,323	-				-0.2
1,248,323	-				-0.4
1,248,323	-				-0.7
1,248,323	-				+0.5
1,248,323	-				-0.7
1,248,323	-				-0.7
1,248,323	-				-1.4
1,248,323	-				-1.8
1,248,403	+		LRK53_RS05330	0.11	-1.7
1,248,403	+		LRK53_RS05330	0.11	-0.7
1,248,403	+		LRK53_RS05330	0.11	-0.1
1,248,403	+		LRK53_RS05330	0.11	-1.0
1,248,403	+		LRK53_RS05330	0.11	-0.4
1,248,404	-		LRK53_RS05330	0.11	-0.1
1,248,404	-		LRK53_RS05330	0.11	-0.1
1,248,404	-		LRK53_RS05330	0.11	-1.7
1,248,404	-		LRK53_RS05330	0.11	-0.3
1,248,404	-		LRK53_RS05330	0.11	-0.7
1,248,452	-		LRK53_RS05330	0.13	-1.7
1,248,507	+		LRK53_RS05330	0.16	-1.7
1,248,507	+		LRK53_RS05330	0.16	-1.1
1,248,507	+		LRK53_RS05330	0.16	+0.3
1,248,507	+		LRK53_RS05330	0.16	-1.5
1,248,507	+		LRK53_RS05330	0.16	-0.1
1,248,507	+		LRK53_RS05330	0.16	+0.3
1,248,507	+		LRK53_RS05330	0.16	-0.6
1,248,507	+		LRK53_RS05330	0.16	-1.4
1,248,507	+		LRK53_RS05330	0.16	-2.4
1,248,507	+		LRK53_RS05330	0.16	+0.2
1,248,507	+		LRK53_RS05330	0.16	-1.7
1,248,507	+		LRK53_RS05330	0.16	-0.1
1,248,508	-		LRK53_RS05330	0.16	+0.9
1,248,508	-		LRK53_RS05330	0.16	-1.4
1,248,508	-		LRK53_RS05330	0.16	-0.1
1,248,508	-		LRK53_RS05330	0.16	-1.4
1,248,508	-		LRK53_RS05330	0.16	-0.7
1,248,508	-		LRK53_RS05330	0.16	-1.4
1,248,508	-		LRK53_RS05330	0.16	-0.7
1,248,508	-		LRK53_RS05330	0.16	-0.7
1,248,508	-		LRK53_RS05330	0.16	-0.7
1,248,511	+		LRK53_RS05330	0.16	-1.7
1,248,511	+		LRK53_RS05330	0.16	-1.3
1,248,511	+		LRK53_RS05330	0.16	-1.1
1,248,511	+		LRK53_RS05330	0.16	+0.5
1,248,512	-		LRK53_RS05330	0.16	+0.9
1,248,512	-		LRK53_RS05330	0.16	-1.1
1,248,512	-		LRK53_RS05330	0.16	-1.2
1,248,512	-		LRK53_RS05330	0.16	-0.1
1,248,512	-		LRK53_RS05330	0.16	-0.1
1,248,608	+		LRK53_RS05330	0.21	-1.1
1,248,608	+		LRK53_RS05330	0.21	-0.7
1,248,608	+		LRK53_RS05330	0.21	-0.9
1,248,609	-		LRK53_RS05330	0.21	+2.5
1,248,609	-		LRK53_RS05330	0.21	-0.7
1,248,609	-		LRK53_RS05330	0.21	-0.8
1,248,609	-		LRK53_RS05330	0.21	-1.5
1,248,609	-		LRK53_RS05330	0.21	-0.8
1,248,609	-		LRK53_RS05330	0.21	-0.7
1,248,609	-		LRK53_RS05330	0.21	+0.9
1,248,609	-		LRK53_RS05330	0.21	-2.0
1,248,609	-		LRK53_RS05330	0.21	+1.3
1,248,609	-		LRK53_RS05330	0.21	-1.1
1,248,652	+		LRK53_RS05330	0.23	+0.3
1,248,652	+		LRK53_RS05330	0.23	-1.4
1,248,652	+		LRK53_RS05330	0.23	+0.3
1,248,652	+		LRK53_RS05330	0.23	-0.1
1,248,652	+		LRK53_RS05330	0.23	-0.7
1,248,652	+		LRK53_RS05330	0.23	+0.9
1,248,652	+		LRK53_RS05330	0.23	-0.7
1,248,652	+		LRK53_RS05330	0.23	-1.0
1,248,653	-		LRK53_RS05330	0.23	+0.9
1,248,653	-		LRK53_RS05330	0.23	-1.0
1,248,824	-		LRK53_RS05330	0.31	-2.4
1,248,830	-		LRK53_RS05330	0.32	+0.2
1,249,060	+		LRK53_RS05330	0.43	-2.3
1,249,060	+		LRK53_RS05330	0.43	-1.1
1,249,060	+		LRK53_RS05330	0.43	-1.2
1,249,060	+		LRK53_RS05330	0.43	-2.5
1,249,060	+		LRK53_RS05330	0.43	-0.7
1,249,060	+		LRK53_RS05330	0.43	-0.4
1,249,060	+		LRK53_RS05330	0.43	+0.9
1,249,060	+		LRK53_RS05330	0.43	-2.4
1,249,061	-		LRK53_RS05330	0.43	+0.9
1,249,061	-		LRK53_RS05330	0.43	-2.3
1,249,061	-		LRK53_RS05330	0.43	-0.7
1,249,061	-		LRK53_RS05330	0.43	-0.1
1,249,061	-		LRK53_RS05330	0.43	-1.6
1,249,216	-		LRK53_RS05330	0.50	-0.9
1,249,387	+		LRK53_RS05330	0.58	-0.8
1,249,387	+		LRK53_RS05330	0.58	+0.3
1,249,387	+		LRK53_RS05330	0.58	-0.4
1,249,388	-		LRK53_RS05330	0.58	-1.7
1,249,388	-		LRK53_RS05330	0.58	-1.7
1,249,388	-		LRK53_RS05330	0.58	-0.1
1,249,388	-		LRK53_RS05330	0.58	-2.9
1,249,388	-		LRK53_RS05330	0.58	-0.2
1,249,604	-		LRK53_RS05330	0.69	-0.9
1,249,604	-		LRK53_RS05330	0.69	+1.5
1,249,604	-		LRK53_RS05330	0.69	-0.4
1,249,604	-		LRK53_RS05330	0.69	+0.3
1,249,604	-		LRK53_RS05330	0.69	-1.9
1,249,604	-		LRK53_RS05330	0.69	-0.1
1,249,892	-		LRK53_RS05330	0.83	+0.5
1,249,892	-		LRK53_RS05330	0.83	+0.9
1,249,892	-		LRK53_RS05330	0.83	+0.9
1,249,892	-		LRK53_RS05330	0.83	-1.1
1,249,990	+		LRK53_RS05330	0.87	-0.4
1,249,990	+		LRK53_RS05330	0.87	+0.5
1,249,990	+		LRK53_RS05330	0.87	-1.3
1,249,990	+		LRK53_RS05330	0.87	-1.5
1,249,990	+		LRK53_RS05330	0.87	-0.4
1,249,991	-		LRK53_RS05330	0.88	-0.1
1,249,991	-		LRK53_RS05330	0.88	+1.3
1,250,074	+				-1.0
1,250,074	+				-0.7
1,250,075	-				+0.9
1,250,075	-				-1.0
1,250,205	+				-1.0
1,250,205	+				-2.1
1,250,205	+				-1.1
1,250,205	+				+0.1
1,250,205	+				-0.7
1,250,206	-				-0.1
1,250,206	-				-0.1
1,250,206	-				-0.4
1,250,206	-				-1.1
1,250,206	-				-1.4
1,250,206	-				-0.8
1,250,206	-				+0.2
1,250,284	+				-0.7
1,250,386	+				-0.1
1,250,386	+				+0.9
1,250,387	-				-1.0
1,250,405	+				-1.1
1,250,405	+				-0.7
1,250,405	+				-0.7
1,250,405	+				-0.9
1,250,406	-				-1.4
1,250,406	-				+1.3
1,250,406	-				-2.1
1,250,406	-				-0.7
1,250,406	-				+0.2
1,250,406	-				-1.2
1,250,439	-				-0.9
1,250,457	+				-1.3
1,250,457	+				-1.4
1,250,457	+				-1.4
1,250,457	+				-0.6
1,250,457	+				-0.1
1,250,458	-				-0.1
1,250,458	-				-0.1
1,250,458	-				-1.5
1,250,458	-				-0.1
1,250,458	-				+0.9
1,250,458	-				-0.7
1,250,987	+		LRK53_RS05335	0.71	+0.3
1,250,987	+		LRK53_RS05335	0.71	-0.1
1,250,987	+		LRK53_RS05335	0.71	-1.2
1,250,987	+		LRK53_RS05335	0.71	+0.3
1,250,987	+		LRK53_RS05335	0.71	-1.1
1,250,987	+		LRK53_RS05335	0.71	-1.1
1,250,988	-		LRK53_RS05335	0.71	-0.1
1,250,988	-		LRK53_RS05335	0.71	-1.0
1,250,988	-		LRK53_RS05335	0.71	-0.8
1,250,988	-		LRK53_RS05335	0.71	+0.3
1,250,988	-		LRK53_RS05335	0.71	-0.7
1,250,988	-		LRK53_RS05335	0.71	-1.4
1,250,988	-		LRK53_RS05335	0.71	-0.8
1,250,988	-		LRK53_RS05335	0.71	+1.3
1,250,988	-		LRK53_RS05335	0.71	+0.9
1,250,988	-		LRK53_RS05335	0.71	-0.4
1,250,988	-		LRK53_RS05335	0.71	-2.4
1,251,095	+		LRK53_RS05335	0.85	-0.2
1,251,095	+		LRK53_RS05335	0.85	-1.0
1,251,095	+		LRK53_RS05335	0.85	+0.9
1,251,095	+		LRK53_RS05335	0.85	-1.3
1,251,095	+		LRK53_RS05335	0.85	-1.7
1,251,095	+		LRK53_RS05335	0.85	-0.1
1,251,095	+		LRK53_RS05335	0.85	-0.4
1,251,096	-		LRK53_RS05335	0.85	-1.7
1,251,096	-		LRK53_RS05335	0.85	-0.1
1,251,096	-		LRK53_RS05335	0.85	+0.9
1,251,096	-		LRK53_RS05335	0.85	-0.8
1,251,096	-		LRK53_RS05335	0.85	-1.4
1,251,096	-		LRK53_RS05335	0.85	-0.5
1,251,096	-		LRK53_RS05335	0.85	-0.1
1,251,096	-		LRK53_RS05335	0.85	-0.1
1,251,096	-		LRK53_RS05335	0.85	-0.3
1,251,130	+		LRK53_RS05335	0.89	-0.8
1,251,130	+		LRK53_RS05335	0.89	+1.9
1,251,130	+		LRK53_RS05335	0.89	-0.1
1,251,131	-		LRK53_RS05335	0.89	-0.8
1,251,131	-		LRK53_RS05335	0.89	-0.8
1,251,131	-		LRK53_RS05335	0.89	-3.2
1,251,241	+				-0.5
1,251,242	-				-1.1