Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04515

Experiment: R2A_PIPES no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES no stress control
1,048,055	-		LRK53_RS04510	0.25	-0.7
1,048,076	+		LRK53_RS04510	0.27	-0.7
1,048,076	+		LRK53_RS04510	0.27	+0.9
1,048,077	-		LRK53_RS04510	0.27	-1.3
1,048,077	-		LRK53_RS04510	0.27	+0.1
1,048,077	-		LRK53_RS04510	0.27	+0.7
1,048,112	+		LRK53_RS04510	0.30	-1.1
1,048,112	+		LRK53_RS04510	0.30	-1.9
1,048,112	+		LRK53_RS04510	0.30	-1.1
1,048,112	+		LRK53_RS04510	0.30	-1.9
1,048,112	+		LRK53_RS04510	0.30	+0.3
1,048,112	+		LRK53_RS04510	0.30	-0.7
1,048,112	+		LRK53_RS04510	0.30	+0.4
1,048,112	+		LRK53_RS04510	0.30	-1.1
1,048,113	-		LRK53_RS04510	0.30	-0.4
1,048,113	-		LRK53_RS04510	0.30	-0.7
1,048,113	-		LRK53_RS04510	0.30	-1.1
1,048,113	-		LRK53_RS04510	0.30	-0.8
1,048,113	-		LRK53_RS04510	0.30	-0.7
1,048,113	-		LRK53_RS04510	0.30	-0.8
1,048,113	-		LRK53_RS04510	0.30	-0.1
1,048,751	+				+1.5
1,048,837	+				+0.9
1,048,837	+				-0.2
1,049,106	+		LRK53_RS04515	0.16	-0.5
1,049,106	+		LRK53_RS04515	0.16	+1.7
1,049,107	-		LRK53_RS04515	0.16	+0.3
1,049,107	-		LRK53_RS04515	0.16	-0.1
1,049,160	+		LRK53_RS04515	0.20	-0.4
1,049,160	+		LRK53_RS04515	0.20	+0.3
1,049,160	+		LRK53_RS04515	0.20	-0.1
1,049,160	+		LRK53_RS04515	0.20	+0.3
1,049,160	+		LRK53_RS04515	0.20	+0.6
1,049,160	+		LRK53_RS04515	0.20	-2.4
1,049,161	-		LRK53_RS04515	0.20	+0.5
1,049,161	-		LRK53_RS04515	0.20	+0.2
1,049,161	-		LRK53_RS04515	0.20	-1.3
1,049,161	-		LRK53_RS04515	0.20	+2.3
1,049,161	-		LRK53_RS04515	0.20	-0.7
1,049,161	-		LRK53_RS04515	0.20	+0.9
1,049,161	-		LRK53_RS04515	0.20	+0.9
1,049,181	+		LRK53_RS04515	0.21	-2.4
1,049,182	-		LRK53_RS04515	0.21	-0.1
1,049,187	+		LRK53_RS04515	0.22	+1.9
1,049,187	+		LRK53_RS04515	0.22	+0.3
1,049,187	+		LRK53_RS04515	0.22	-0.7
1,049,187	+		LRK53_RS04515	0.22	-1.7
1,049,187	+		LRK53_RS04515	0.22	-0.7
1,049,187	+		LRK53_RS04515	0.22	-0.7
1,049,187	+		LRK53_RS04515	0.22	-0.1
1,049,188	-		LRK53_RS04515	0.22	-1.1
1,049,211	+		LRK53_RS04515	0.23	-0.1
1,049,211	+		LRK53_RS04515	0.23	-0.3
1,049,401	-		LRK53_RS04515	0.38	-0.5
1,049,403	+		LRK53_RS04515	0.38	+0.9
1,049,403	+		LRK53_RS04515	0.38	+0.9
1,049,403	+		LRK53_RS04515	0.38	-1.2
1,049,403	+		LRK53_RS04515	0.38	-0.3
1,049,403	+		LRK53_RS04515	0.38	+0.6
1,049,403	+		LRK53_RS04515	0.38	+0.9
1,049,403	+		LRK53_RS04515	0.38	+0.3
1,049,403	+		LRK53_RS04515	0.38	+0.3
1,049,403	+		LRK53_RS04515	0.38	+0.3
1,049,403	+		LRK53_RS04515	0.38	-0.7
1,049,403	+		LRK53_RS04515	0.38	-2.4
1,049,403	+		LRK53_RS04515	0.38	-1.7
1,049,404	-		LRK53_RS04515	0.38	+0.5
1,049,404	-		LRK53_RS04515	0.38	+0.9
1,049,404	-		LRK53_RS04515	0.38	+0.3
1,049,404	-		LRK53_RS04515	0.38	-0.8
1,049,404	-		LRK53_RS04515	0.38	+0.9
1,049,404	-		LRK53_RS04515	0.38	+0.9
1,049,404	-		LRK53_RS04515	0.38	-0.1
1,049,404	-		LRK53_RS04515	0.38	-0.8
1,049,404	-		LRK53_RS04515	0.38	-0.1
1,049,404	-		LRK53_RS04515	0.38	-0.7
1,049,404	-		LRK53_RS04515	0.38	-0.7
1,049,404	-		LRK53_RS04515	0.38	+0.5
1,049,404	-		LRK53_RS04515	0.38	-0.1
1,049,404	-		LRK53_RS04515	0.38	-2.2
1,049,496	+		LRK53_RS04515	0.45	-1.6
1,049,496	+		LRK53_RS04515	0.45	-1.7
1,049,496	+		LRK53_RS04515	0.45	-1.5
1,049,496	+		LRK53_RS04515	0.45	-1.7
1,049,496	+		LRK53_RS04515	0.45	+1.5
1,049,496	+		LRK53_RS04515	0.45	-0.4
1,049,496	+		LRK53_RS04515	0.45	+0.9
1,049,497	-		LRK53_RS04515	0.45	+0.3
1,049,497	-		LRK53_RS04515	0.45	-0.8
1,049,497	-		LRK53_RS04515	0.45	+0.9
1,049,497	-		LRK53_RS04515	0.45	-2.4
1,049,523	+		LRK53_RS04515	0.47	+0.9
1,049,550	+		LRK53_RS04515	0.49	+0.9
1,049,550	+		LRK53_RS04515	0.49	-0.9
1,049,551	-		LRK53_RS04515	0.49	-0.7
1,049,551	-		LRK53_RS04515	0.49	+0.3
1,049,551	-		LRK53_RS04515	0.49	-0.1
1,049,619	+		LRK53_RS04515	0.54	-2.2
1,049,620	-		LRK53_RS04515	0.54	+0.9
1,049,620	-		LRK53_RS04515	0.54	-1.1
1,049,620	-		LRK53_RS04515	0.54	-1.1
1,049,620	-		LRK53_RS04515	0.54	+1.3
1,049,620	-		LRK53_RS04515	0.54	-2.8
1,049,620	-		LRK53_RS04515	0.54	-1.1
1,049,620	-		LRK53_RS04515	0.54	+0.3
1,049,679	+		LRK53_RS04515	0.59	-2.4
1,049,679	+		LRK53_RS04515	0.59	-1.1
1,049,680	-		LRK53_RS04515	0.59	+1.5
1,049,680	-		LRK53_RS04515	0.59	-0.7
1,049,709	+		LRK53_RS04515	0.61	+0.2
1,049,709	+		LRK53_RS04515	0.61	+0.5
1,049,709	+		LRK53_RS04515	0.61	-1.4
1,049,709	+		LRK53_RS04515	0.61	-0.1
1,049,709	+		LRK53_RS04515	0.61	-0.1
1,049,709	+		LRK53_RS04515	0.61	+0.9
1,049,709	+		LRK53_RS04515	0.61	-0.5
1,049,709	+		LRK53_RS04515	0.61	+0.9
1,049,709	+		LRK53_RS04515	0.61	-0.5
1,049,709	+		LRK53_RS04515	0.61	-0.1
1,049,710	-		LRK53_RS04515	0.61	+0.5
1,049,710	-		LRK53_RS04515	0.61	-0.1
1,049,710	-		LRK53_RS04515	0.61	+0.5
1,049,710	-		LRK53_RS04515	0.61	-0.1
1,049,710	-		LRK53_RS04515	0.61	-0.2
1,049,710	-		LRK53_RS04515	0.61	-0.1
1,049,710	-		LRK53_RS04515	0.61	-0.1
1,049,710	-		LRK53_RS04515	0.61	-0.7
1,049,710	-		LRK53_RS04515	0.61	+0.1
1,049,710	-		LRK53_RS04515	0.61	-0.1
1,049,710	-		LRK53_RS04515	0.61	+0.9
1,049,796	+		LRK53_RS04515	0.68	-0.1
1,049,796	+		LRK53_RS04515	0.68	-1.7
1,049,796	+		LRK53_RS04515	0.68	+0.5
1,049,796	+		LRK53_RS04515	0.68	-0.1
1,049,796	+		LRK53_RS04515	0.68	+0.5
1,049,797	-		LRK53_RS04515	0.68	-1.1
1,049,797	-		LRK53_RS04515	0.68	+0.3
1,049,797	-		LRK53_RS04515	0.68	-0.1
1,050,048	+		LRK53_RS04515	0.87	-0.1
1,050,048	+		LRK53_RS04515	0.87	+0.2
1,050,049	-		LRK53_RS04515	0.87	-0.1
1,050,223	+				+0.3
1,050,223	+				-0.7
1,050,223	+				+1.5
1,050,223	+				-2.0
1,050,223	+				-1.4
1,050,223	+				+2.3
1,050,223	+				-0.7
1,050,223	+				-0.7
1,050,223	+				-0.2
1,050,223	+				-1.7
1,050,223	+				-1.1
1,050,223	+				-1.7
1,050,223	+				+0.9
1,050,224	-				-0.3
1,050,224	-				-0.5
1,050,224	-				+0.9
1,050,224	-				-1.4
1,050,224	-				+1.9
1,050,224	-				+1.2
1,050,224	-				+0.3
1,050,224	-				+1.9
1,050,224	-				-0.1
1,050,224	-				-2.1
1,050,300	+				-1.9
1,050,300	+				-1.4
1,050,300	+				-0.3
1,050,300	+				-0.3
1,050,300	+				-0.3
1,050,300	+				-2.4
1,050,323	+				+0.6
1,050,323	+				-0.1
1,050,323	+				+0.2
1,050,323	+				-1.1
1,050,323	+				-1.9
1,050,323	+				-0.8
1,050,324	-				+0.0
1,050,324	-				-0.7
1,050,324	-				+2.5
1,050,324	-				-0.1
1,050,324	-				-2.1
1,050,324	-				-1.5
1,050,338	+		LRK53_RS04520	0.10	-1.1
1,050,338	+		LRK53_RS04520	0.10	-0.1
1,050,338	+		LRK53_RS04520	0.10	-0.3
1,050,338	+		LRK53_RS04520	0.10	+0.5
1,050,338	+		LRK53_RS04520	0.10	+1.5
1,050,338	+		LRK53_RS04520	0.10	-1.9
1,050,339	-		LRK53_RS04520	0.10	-3.0
1,050,339	-		LRK53_RS04520	0.10	-1.2
1,050,368	+		LRK53_RS04520	0.15	-0.4
1,050,368	+		LRK53_RS04520	0.15	-1.7
1,050,369	-		LRK53_RS04520	0.15	+0.2
1,050,369	-		LRK53_RS04520	0.15	-0.1
1,050,369	-		LRK53_RS04520	0.15	-2.2
1,050,369	-		LRK53_RS04520	0.15	-2.2
1,050,452	+		LRK53_RS04520	0.30	-2.3
1,050,629	+		LRK53_RS04520	0.60	-1.5
1,050,629	+		LRK53_RS04520	0.60	-0.5
1,050,630	-		LRK53_RS04520	0.60	-1.9
1,050,630	-		LRK53_RS04520	0.60	-1.6
1,050,630	-		LRK53_RS04520	0.60	-1.2
1,050,630	-		LRK53_RS04520	0.60	-0.1
1,050,719	+		LRK53_RS04520	0.75	-0.5
1,050,719	+		LRK53_RS04520	0.75	+0.4
1,050,719	+		LRK53_RS04520	0.75	-0.5
1,050,719	+		LRK53_RS04520	0.75	-1.2
1,050,719	+		LRK53_RS04520	0.75	+1.5
1,050,719	+		LRK53_RS04520	0.75	+0.1
1,050,719	+		LRK53_RS04520	0.75	-0.1
1,050,719	+		LRK53_RS04520	0.75	-1.1
1,050,720	-		LRK53_RS04520	0.75	-0.9
1,050,720	-		LRK53_RS04520	0.75	-0.8
1,050,720	-		LRK53_RS04520	0.75	+0.9
1,050,720	-		LRK53_RS04520	0.75	-0.9
1,050,720	-		LRK53_RS04520	0.75	-1.3
1,050,720	-		LRK53_RS04520	0.75	-1.1
1,050,720	-		LRK53_RS04520	0.75	+3.3
1,050,720	-		LRK53_RS04520	0.75	-1.2
1,050,720	-		LRK53_RS04520	0.75	+0.9
1,050,720	-		LRK53_RS04520	0.75	-1.8
1,050,722	-		LRK53_RS04520	0.76	-1.2
1,050,722	-		LRK53_RS04520	0.76	-2.2
1,050,740	+		LRK53_RS04520	0.79	-0.7
1,050,740	+		LRK53_RS04520	0.79	-0.2
1,050,740	+		LRK53_RS04520	0.79	-1.1
1,050,740	+		LRK53_RS04520	0.79	-0.1
1,050,740	+		LRK53_RS04520	0.79	-1.1
1,050,740	+		LRK53_RS04520	0.79	+0.9
1,050,740	+		LRK53_RS04520	0.79	-1.6
1,050,740	+		LRK53_RS04520	0.79	-0.9
1,050,740	+		LRK53_RS04520	0.79	+0.1
1,050,740	+		LRK53_RS04520	0.79	-1.4
1,050,740	+		LRK53_RS04520	0.79	+0.2
1,050,740	+		LRK53_RS04520	0.79	-2.0
1,050,740	+		LRK53_RS04520	0.79	-1.4
1,050,740	+		LRK53_RS04520	0.79	+0.2
1,050,740	+		LRK53_RS04520	0.79	-1.9
1,050,741	-		LRK53_RS04520	0.79	-1.4
1,050,741	-		LRK53_RS04520	0.79	-1.1
1,050,741	-		LRK53_RS04520	0.79	+0.3
1,050,741	-		LRK53_RS04520	0.79	-0.7
1,050,741	-		LRK53_RS04520	0.79	-0.4
1,050,741	-		LRK53_RS04520	0.79	+0.9
1,050,741	-		LRK53_RS04520	0.79	-1.0
1,050,789	+		LRK53_RS04520	0.87	-1.1
1,050,789	+		LRK53_RS04520	0.87	+0.3
1,050,789	+		LRK53_RS04520	0.87	+0.9
1,050,790	-		LRK53_RS04520	0.87	-0.1
1,050,938	+				-1.1
1,050,938	+				-1.4