Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16305

Experiment: R2A_PIPES no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES no stress control
3,589,048	-		LRK53_RS16300	0.41	-1.1
3,589,048	-		LRK53_RS16300	0.41	-0.9
3,589,048	-		LRK53_RS16300	0.41	-1.1
3,589,048	-		LRK53_RS16300	0.41	-1.3
3,589,048	-		LRK53_RS16300	0.41	-0.5
3,589,048	-		LRK53_RS16300	0.41	-0.9
3,589,048	-		LRK53_RS16300	0.41	-0.5
3,589,048	-		LRK53_RS16300	0.41	+0.6
3,589,048	-		LRK53_RS16300	0.41	-0.9
3,589,048	-		LRK53_RS16300	0.41	-0.1
3,589,520	+				-1.8
3,589,521	-				-1.4
3,589,521	-				-0.7
3,589,521	-				+0.5
3,589,521	-				-1.6
3,589,823	-				-0.5
3,589,843	+				-0.8
3,589,843	+				+0.1
3,589,844	-				-0.5
3,589,844	-				+1.1
3,590,095	+		LRK53_RS16305	0.11	-0.9
3,590,095	+		LRK53_RS16305	0.11	-0.7
3,590,407	+		LRK53_RS16305	0.27	-2.1
3,590,632	+		LRK53_RS16305	0.39	+0.5
3,590,632	+		LRK53_RS16305	0.39	-1.7
3,590,632	+		LRK53_RS16305	0.39	-0.2
3,590,632	+		LRK53_RS16305	0.39	+1.1
3,590,632	+		LRK53_RS16305	0.39	-3.1
3,590,633	-		LRK53_RS16305	0.39	-1.9
3,590,633	-		LRK53_RS16305	0.39	+1.1
3,590,633	-		LRK53_RS16305	0.39	-1.6
3,590,633	-		LRK53_RS16305	0.39	-1.3
3,590,633	-		LRK53_RS16305	0.39	+0.1
3,590,633	-		LRK53_RS16305	0.39	-1.3
3,590,633	-		LRK53_RS16305	0.39	-2.4
3,590,633	-		LRK53_RS16305	0.39	-1.4
3,590,633	-		LRK53_RS16305	0.39	-0.4
3,590,633	-		LRK53_RS16305	0.39	+0.1
3,590,633	-		LRK53_RS16305	0.39	+0.5
3,590,633	-		LRK53_RS16305	0.39	-0.9
3,590,633	-		LRK53_RS16305	0.39	-0.5
3,590,680	+		LRK53_RS16305	0.41	-1.9
3,590,680	+		LRK53_RS16305	0.41	-1.5
3,590,680	+		LRK53_RS16305	0.41	-0.5
3,590,680	+		LRK53_RS16305	0.41	-0.9
3,590,680	+		LRK53_RS16305	0.41	-0.8
3,590,680	+		LRK53_RS16305	0.41	-0.7
3,590,681	-		LRK53_RS16305	0.41	-1.3
3,590,681	-		LRK53_RS16305	0.41	+1.1
3,590,725	+		LRK53_RS16305	0.43	-1.6
3,590,725	+		LRK53_RS16305	0.43	-2.6
3,590,726	-		LRK53_RS16305	0.44	-1.3
3,590,726	-		LRK53_RS16305	0.44	-0.9
3,590,726	-		LRK53_RS16305	0.44	+1.1
3,590,773	+		LRK53_RS16305	0.46	-1.1
3,590,774	-		LRK53_RS16305	0.46	-1.5
3,590,774	-		LRK53_RS16305	0.46	-1.3
3,590,774	-		LRK53_RS16305	0.46	-2.0
3,590,774	-		LRK53_RS16305	0.46	-0.9
3,590,812	+		LRK53_RS16305	0.48	-1.4
3,590,812	+		LRK53_RS16305	0.48	-0.5
3,590,812	+		LRK53_RS16305	0.48	-0.9
3,590,812	+		LRK53_RS16305	0.48	+0.2
3,590,813	-		LRK53_RS16305	0.48	-2.2
3,590,813	-		LRK53_RS16305	0.48	-1.9
3,590,813	-		LRK53_RS16305	0.48	-1.4
3,591,040	+		LRK53_RS16305	0.60	-1.4
3,591,041	-		LRK53_RS16305	0.60	-1.6
3,591,160	+		LRK53_RS16305	0.66	-1.1
3,591,160	+		LRK53_RS16305	0.66	-2.0
3,591,160	+		LRK53_RS16305	0.66	-0.5
3,591,160	+		LRK53_RS16305	0.66	-0.5
3,591,161	-		LRK53_RS16305	0.66	+0.1
3,591,161	-		LRK53_RS16305	0.66	-0.9
3,591,382	+		LRK53_RS16305	0.77	-1.6
3,591,382	+		LRK53_RS16305	0.77	-1.5
3,591,382	+		LRK53_RS16305	0.77	+0.6
3,591,383	-		LRK53_RS16305	0.78	-1.1
3,591,383	-		LRK53_RS16305	0.78	+0.5
3,591,572	-		LRK53_RS16305	0.87	-1.3
3,591,572	-		LRK53_RS16305	0.87	-0.4
3,591,604	+		LRK53_RS16305	0.89	-0.6
3,591,604	+		LRK53_RS16305	0.89	-0.5
3,591,604	+		LRK53_RS16305	0.89	-1.5
3,591,604	+		LRK53_RS16305	0.89	-2.4
3,591,604	+		LRK53_RS16305	0.89	-0.3
3,591,604	+		LRK53_RS16305	0.89	-1.3
3,591,604	+		LRK53_RS16305	0.89	-0.9
3,591,604	+		LRK53_RS16305	0.89	+0.1
3,591,604	+		LRK53_RS16305	0.89	-0.1
3,591,604	+		LRK53_RS16305	0.89	-0.5
3,591,604	+		LRK53_RS16305	0.89	-0.9
3,591,604	+		LRK53_RS16305	0.89	-0.7
3,591,604	+		LRK53_RS16305	0.89	+0.1
3,591,604	+		LRK53_RS16305	0.89	-0.5
3,591,605	-		LRK53_RS16305	0.89	-0.5
3,591,605	-		LRK53_RS16305	0.89	-1.6
3,591,605	-		LRK53_RS16305	0.89	-0.9
3,591,605	-		LRK53_RS16305	0.89	-2.6
3,591,605	-		LRK53_RS16305	0.89	+0.6
3,591,605	-		LRK53_RS16305	0.89	-0.5
3,591,605	-		LRK53_RS16305	0.89	-0.5
3,591,605	-		LRK53_RS16305	0.89	-1.1
3,591,605	-		LRK53_RS16305	0.89	-0.5
3,591,605	-		LRK53_RS16305	0.89	+1.1
3,591,653	+				-0.5
3,591,654	-				+0.1
3,591,897	+		LRK53_RS16310	0.23	-0.5
3,591,897	+		LRK53_RS16310	0.23	+0.1
3,591,897	+		LRK53_RS16310	0.23	+0.5
3,591,897	+		LRK53_RS16310	0.23	+0.6
3,591,897	+		LRK53_RS16310	0.23	-1.2
3,591,897	+		LRK53_RS16310	0.23	-2.1
3,591,897	+		LRK53_RS16310	0.23	-0.5
3,591,897	+		LRK53_RS16310	0.23	+0.1
3,591,897	+		LRK53_RS16310	0.23	+0.1
3,591,897	+		LRK53_RS16310	0.23	+1.1
3,591,897	+		LRK53_RS16310	0.23	+1.6
3,591,897	+		LRK53_RS16310	0.23	-0.5
3,591,897	+		LRK53_RS16310	0.23	+0.1
3,591,898	-		LRK53_RS16310	0.23	+0.5
3,591,898	-		LRK53_RS16310	0.23	+0.1
3,591,898	-		LRK53_RS16310	0.23	-2.3
3,591,898	-		LRK53_RS16310	0.23	+0.1
3,591,898	-		LRK53_RS16310	0.23	-0.2
3,591,898	-		LRK53_RS16310	0.23	+1.1
3,591,898	-		LRK53_RS16310	0.23	+1.1
3,591,898	-		LRK53_RS16310	0.23	-0.4
3,591,898	-		LRK53_RS16310	0.23	-0.5
3,591,898	-		LRK53_RS16310	0.23	+0.1
3,591,898	-		LRK53_RS16310	0.23	+0.9
3,591,898	-		LRK53_RS16310	0.23	-1.3
3,591,898	-		LRK53_RS16310	0.23	+1.1
3,592,110	+		LRK53_RS16310	0.82	+2.1
3,592,219	+				-1.9
3,592,219	+				+1.1
3,592,219	+				-0.7
3,592,219	+				-0.5
3,592,219	+				+0.1
3,592,219	+				+0.8
3,592,219	+				-0.9
3,592,219	+				-0.3
3,592,219	+				-1.3
3,592,220	-				-1.5
3,592,220	-				-1.2
3,592,220	-				-0.5
3,592,220	-				+0.1
3,592,220	-				-0.6
3,592,220	-				-0.9
3,592,220	-				-0.9
3,592,220	-				+0.3
3,592,339	+				+0.6
3,592,401	-		LRK53_RS16315	0.12	-1.2
3,592,699	+		LRK53_RS16315	0.34	+1.1
3,592,699	+		LRK53_RS16315	0.34	-1.3
3,592,700	-		LRK53_RS16315	0.34	+1.5
3,592,700	-		LRK53_RS16315	0.34	-0.6
3,592,721	+		LRK53_RS16315	0.36	-1.3
3,592,721	+		LRK53_RS16315	0.36	-0.3
3,592,721	+		LRK53_RS16315	0.36	-0.5
3,592,721	+		LRK53_RS16315	0.36	+0.5
3,592,721	+		LRK53_RS16315	0.36	-0.4
3,592,721	+		LRK53_RS16315	0.36	-1.1
3,592,721	+		LRK53_RS16315	0.36	+0.5
3,592,721	+		LRK53_RS16315	0.36	-2.1
3,592,721	+		LRK53_RS16315	0.36	-1.3
3,592,722	-		LRK53_RS16315	0.36	-1.3
3,592,722	-		LRK53_RS16315	0.36	-0.9
3,592,722	-		LRK53_RS16315	0.36	+0.1
3,592,722	-		LRK53_RS16315	0.36	-0.7
3,592,722	-		LRK53_RS16315	0.36	-1.3
3,592,722	-		LRK53_RS16315	0.36	-0.5
3,592,722	-		LRK53_RS16315	0.36	-0.5
3,592,798	+		LRK53_RS16315	0.41	-0.5