Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17350

Experiment: R2A_PIPES no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES no stress control
3,811,136	+				-2.4
3,811,136	+				+0.1
3,811,137	-				+1.1
3,811,137	-				-0.9
3,811,137	-				-0.8
3,811,137	-				-0.9
3,811,137	-				-0.1
3,811,137	-				-0.5
3,811,321	+				-1.0
3,811,321	+				+0.0
3,811,321	+				-0.9
3,811,321	+				-0.9
3,811,322	-				-1.0
3,811,322	-				+0.5
3,811,390	+				-0.6
3,811,390	+				-0.9
3,811,390	+				-1.2
3,811,390	+				+3.7
3,811,390	+				+1.5
3,811,390	+				-1.7
3,811,390	+				+0.5
3,811,390	+				-1.2
3,811,390	+				+0.1
3,811,390	+				-1.1
3,811,391	-				+0.5
3,811,391	-				-0.4
3,811,391	-				-0.5
3,811,391	-				+0.5
3,811,391	-				-0.6
3,811,391	-				-0.8
3,811,391	-				-0.7
3,811,393	+				-1.6
3,811,393	+				+0.1
3,811,393	+				-1.4
3,811,393	+				-1.8
3,811,393	+				-2.1
3,811,393	+				-0.5
3,811,393	+				+1.7
3,811,393	+				-0.3
3,811,393	+				+0.9
3,811,393	+				-0.5
3,811,393	+				+0.4
3,811,393	+				-0.5
3,811,393	+				-0.4
3,811,393	+				+2.1
3,811,393	+				+1.1
3,811,393	+				+1.1
3,811,393	+				-3.0
3,811,393	+				-1.2
3,811,393	+				-0.6
3,811,393	+				-0.9
3,811,393	+				-0.5
3,811,393	+				-2.7
3,811,393	+				+0.1
3,811,393	+				-0.2
3,811,393	+				-0.9
3,811,393	+				-0.9
3,811,394	-				-0.2
3,811,394	-				+1.3
3,811,394	-				+1.1
3,811,394	-				-1.1
3,811,394	-				-0.4
3,811,394	-				+0.1
3,811,394	-				-0.5
3,811,394	-				-0.1
3,811,394	-				+0.7
3,811,394	-				-0.2
3,811,394	-				-0.7
3,811,394	-				-0.9
3,811,394	-				-0.4
3,811,394	-				+0.1
3,811,394	-				-0.1
3,811,394	-				+0.1
3,811,394	-				+0.2
3,811,394	-				+0.5
3,811,394	-				-1.2
3,811,394	-				-1.0
3,811,394	-				+0.1
3,811,450	+				-1.4
3,811,450	+				-0.3
3,811,450	+				+0.1
3,811,450	+				+0.1
3,811,450	+				+1.1
3,811,451	-				-0.2
3,811,451	-				+0.1
3,811,451	-				-1.2
3,811,451	-				+1.1
3,811,451	-				-1.9
3,811,451	-				-0.5
3,811,451	-				-0.5
3,811,451	-				-0.5
3,811,451	-				+1.1
3,811,451	-				-1.1
3,811,451	-				-1.2
3,811,461	+				-0.9
3,811,461	+				-0.5
3,811,461	+				+0.1
3,811,462	-				-0.9
3,811,462	-				-0.2
3,811,462	-				+1.1
3,811,539	+				+0.2
3,811,539	+				-1.1
3,811,539	+				-1.4
3,811,539	+				-0.5
3,811,539	+				+0.1
3,811,539	+				+0.5
3,811,539	+				+1.1
3,811,539	+				+0.1
3,811,539	+				+0.1
3,811,539	+				-1.7
3,811,539	+				+2.7
3,811,539	+				+1.5
3,811,539	+				-0.2
3,811,539	+				-1.2
3,811,539	+				+2.1
3,811,539	+				-1.4
3,811,539	+				+0.5
3,811,539	+				-2.2
3,811,539	+				+0.1
3,811,540	-				+0.7
3,811,540	-				-1.6
3,811,540	-				-1.2
3,811,540	-				-0.2
3,811,540	-				-0.2
3,811,540	-				+0.2
3,811,540	-				+0.1
3,811,540	-				-1.3
3,811,540	-				-0.8
3,811,540	-				+1.1
3,811,540	-				-0.9
3,811,540	-				-0.5
3,811,540	-				+0.1
3,811,540	-				-0.9
3,811,540	-				-0.9
3,811,619	+		LRK53_RS17345	0.15	+1.1
3,811,619	+		LRK53_RS17345	0.15	-0.7
3,811,619	+		LRK53_RS17345	0.15	-0.5
3,811,619	+		LRK53_RS17345	0.15	-1.9
3,811,619	+		LRK53_RS17345	0.15	+0.1
3,811,619	+		LRK53_RS17345	0.15	-0.5
3,811,619	+		LRK53_RS17345	0.15	+0.1
3,811,619	+		LRK53_RS17345	0.15	-1.5
3,811,619	+		LRK53_RS17345	0.15	+0.1
3,811,620	-		LRK53_RS17345	0.16	-1.2
3,811,620	-		LRK53_RS17345	0.16	-0.5
3,811,620	-		LRK53_RS17345	0.16	-0.5
3,811,620	-		LRK53_RS17345	0.16	-1.4
3,811,620	-		LRK53_RS17345	0.16	-1.5
3,811,620	-		LRK53_RS17345	0.16	-0.6
3,811,620	-		LRK53_RS17345	0.16	-1.2
3,811,669	+		LRK53_RS17345	0.36	+0.1
3,811,670	-		LRK53_RS17345	0.37	-0.9
3,811,748	+		LRK53_RS17345	0.69	-0.5
3,811,748	+		LRK53_RS17345	0.69	+0.1
3,811,748	+		LRK53_RS17345	0.69	-1.0
3,811,748	+		LRK53_RS17345	0.69	-1.5
3,811,748	+		LRK53_RS17345	0.69	+0.5
3,811,748	+		LRK53_RS17345	0.69	+1.1
3,811,748	+		LRK53_RS17345	0.69	-0.7
3,811,748	+		LRK53_RS17345	0.69	+0.1
3,811,748	+		LRK53_RS17345	0.69	-1.2
3,811,748	+		LRK53_RS17345	0.69	-0.3
3,811,748	+		LRK53_RS17345	0.69	+0.1
3,811,748	+		LRK53_RS17345	0.69	-1.1
3,811,748	+		LRK53_RS17345	0.69	-1.2
3,811,749	-		LRK53_RS17345	0.70	-0.8
3,811,749	-		LRK53_RS17345	0.70	-1.4
3,811,749	-		LRK53_RS17345	0.70	+0.1
3,811,749	-		LRK53_RS17345	0.70	-0.3
3,811,897	+				-1.2
3,811,897	+				+1.1
3,811,897	+				-0.7
3,811,897	+				+1.1
3,811,897	+				-0.9
3,811,897	+				-0.3
3,811,898	-				+0.1
3,811,898	-				+0.4
3,811,898	-				+1.7
3,811,898	-				-0.2
3,811,931	+				+1.1
3,811,931	+				-0.9
3,811,931	+				+0.4
3,811,931	+				-1.4
3,811,931	+				+0.7
3,811,931	+				-0.8
3,811,931	+				-0.5
3,811,931	+				-0.2
3,811,931	+				-0.4
3,811,932	-				-0.5
3,811,932	-				-1.2
3,811,932	-				+1.1
3,811,932	-				-1.2
3,811,932	-				+1.1
3,811,932	-				-0.8
3,811,932	-				+0.2
3,811,932	-				-0.5
3,811,932	-				-0.5
3,811,932	-				+1.5
3,811,932	-				-0.1
3,811,947	+				-0.1
3,811,948	-				+1.1
3,811,948	-				+0.1
3,811,958	+				-1.1
3,811,958	+				-1.7
3,811,958	+				+0.4
3,811,958	+				+0.1
3,811,958	+				+0.8
3,811,958	+				-0.2
3,811,958	+				-0.5
3,811,958	+				-0.0
3,811,958	+				-0.3
3,811,958	+				-0.9
3,811,958	+				-1.4
3,811,958	+				-0.4
3,811,958	+				-2.3
3,811,958	+				-0.3
3,811,958	+				-0.1
3,811,958	+				-1.3
3,811,958	+				-0.9
3,811,958	+				+0.9
3,811,958	+				+0.6
3,811,958	+				+1.1
3,811,958	+				-1.0
3,811,958	+				-0.1
3,811,958	+				-1.2
3,811,958	+				-1.7
3,811,958	+				+0.1
3,811,958	+				+0.1
3,811,958	+				+0.4
3,811,958	+				+1.1
3,811,958	+				+0.7
3,811,959	-				+0.5
3,811,959	-				-0.5
3,811,959	-				+0.2
3,811,959	-				-1.1
3,811,959	-				-0.9
3,811,959	-				-0.5
3,811,959	-				-1.0
3,811,959	-				+0.4
3,811,959	-				-0.1
3,811,959	-				-1.7
3,811,959	-				+0.1
3,811,959	-				+0.1
3,811,959	-				+1.1
3,811,959	-				+0.9
3,811,959	-				-0.3
3,811,959	-				-0.3
3,811,959	-				-0.5
3,811,959	-				+0.8
3,811,959	-				-0.6
3,811,959	-				+2.7
3,811,959	-				-0.2
3,811,959	-				+0.2
3,811,959	-				-0.9
3,811,959	-				-0.5
3,812,098	-		LRK53_RS17350	0.31	-1.3
3,812,098	-		LRK53_RS17350	0.31	+1.1
3,812,130	+		LRK53_RS17350	0.43	-0.8
3,812,130	+		LRK53_RS17350	0.43	-0.9
3,812,131	-		LRK53_RS17350	0.44	-1.7
3,812,131	-		LRK53_RS17350	0.44	-0.9
3,812,131	-		LRK53_RS17350	0.44	-2.7
3,812,131	-		LRK53_RS17350	0.44	-0.2
3,812,131	-		LRK53_RS17350	0.44	-0.9
3,812,259	+				-0.5
3,812,259	+				+1.1
3,812,259	+				+0.1
3,812,259	+				+1.1
3,812,259	+				+0.8
3,812,260	-				+0.5
3,812,260	-				+1.1
3,812,266	+				-0.5
3,812,266	+				+0.3
3,812,266	+				+0.7
3,812,267	-				-0.2
3,812,325	+				-1.5
3,812,325	+				-1.1
3,812,326	-				+0.5
3,812,326	-				-0.7
3,812,326	-				+0.8
3,812,326	-				+0.1
3,812,326	-				+0.1
3,812,326	-				-0.6
3,812,544	+				-1.9
3,812,544	+				-0.5
3,812,544	+				+0.4
3,812,544	+				+1.1
3,812,545	-				+1.1
3,812,545	-				+0.1
3,812,545	-				-1.3
3,812,545	-				+0.1
3,812,545	-				-0.2
3,812,665	+		LRK53_RS17360	0.14	-1.9
3,812,665	+		LRK53_RS17360	0.14	+0.2
3,812,665	+		LRK53_RS17360	0.14	-2.1
3,812,673	+		LRK53_RS17360	0.15	-0.2
3,812,674	-		LRK53_RS17360	0.15	-1.1
3,812,812	+		LRK53_RS17360	0.35	-0.7
3,812,812	+		LRK53_RS17360	0.35	-0.9
3,812,813	-		LRK53_RS17360	0.36	+0.5
3,812,813	-		LRK53_RS17360	0.36	-0.2
3,812,813	-		LRK53_RS17360	0.36	-0.4
3,812,813	-		LRK53_RS17360	0.36	+1.1
3,812,887	+		LRK53_RS17360	0.46	+0.4
3,812,887	+		LRK53_RS17360	0.46	-0.9
3,812,887	+		LRK53_RS17360	0.46	+1.3
3,812,887	+		LRK53_RS17360	0.46	+0.1
3,812,887	+		LRK53_RS17360	0.46	-0.0
3,812,887	+		LRK53_RS17360	0.46	+1.5
3,812,888	-		LRK53_RS17360	0.46	+0.4
3,812,888	-		LRK53_RS17360	0.46	-0.7
3,812,888	-		LRK53_RS17360	0.46	-0.0
3,812,888	-		LRK53_RS17360	0.46	-0.4
3,812,888	-		LRK53_RS17360	0.46	+0.5
3,812,888	-		LRK53_RS17360	0.46	+0.5
3,812,888	-		LRK53_RS17360	0.46	-0.9
3,812,888	-		LRK53_RS17360	0.46	-1.7
3,812,888	-		LRK53_RS17360	0.46	+0.2
3,812,888	-		LRK53_RS17360	0.46	-0.5
3,813,019	+		LRK53_RS17360	0.65	+2.1
3,813,019	+		LRK53_RS17360	0.65	+0.5
3,813,019	+		LRK53_RS17360	0.65	-1.5
3,813,019	+		LRK53_RS17360	0.65	+0.5
3,813,019	+		LRK53_RS17360	0.65	-3.2
3,813,019	+		LRK53_RS17360	0.65	+2.1
3,813,019	+		LRK53_RS17360	0.65	-0.2
3,813,020	-		LRK53_RS17360	0.66	-0.5
3,813,020	-		LRK53_RS17360	0.66	+0.1
3,813,020	-		LRK53_RS17360	0.66	+0.7
3,813,020	-		LRK53_RS17360	0.66	+0.2
3,813,020	-		LRK53_RS17360	0.66	-0.1
3,813,020	-		LRK53_RS17360	0.66	-0.9
3,813,020	-		LRK53_RS17360	0.66	-1.4
3,813,020	-		LRK53_RS17360	0.66	+1.7
3,813,020	-		LRK53_RS17360	0.66	-1.5
3,813,020	-		LRK53_RS17360	0.66	-1.5
3,813,178	+		LRK53_RS17360	0.88	+0.1
3,813,178	+		LRK53_RS17360	0.88	-1.8
3,813,178	+		LRK53_RS17360	0.88	-0.5
3,813,178	+		LRK53_RS17360	0.88	-1.2
3,813,178	+		LRK53_RS17360	0.88	+0.1
3,813,178	+		LRK53_RS17360	0.88	-0.7
3,813,178	+		LRK53_RS17360	0.88	+1.1
3,813,178	+		LRK53_RS17360	0.88	-1.5
3,813,179	-		LRK53_RS17360	0.89	-0.2
3,813,179	-		LRK53_RS17360	0.89	-0.9
3,813,179	-		LRK53_RS17360	0.89	+1.1
3,813,179	-		LRK53_RS17360	0.89	+0.1
3,813,179	-		LRK53_RS17360	0.89	-1.2
3,813,179	-		LRK53_RS17360	0.89	-0.4
3,813,179	-		LRK53_RS17360	0.89	-0.2
3,813,179	-		LRK53_RS17360	0.89	-0.6
3,813,179	-		LRK53_RS17360	0.89	-1.0
3,813,179	-		LRK53_RS17360	0.89	+1.1
3,813,179	-		LRK53_RS17360	0.89	-0.5
3,813,179	-		LRK53_RS17360	0.89	+0.3
3,813,216	-				-0.5
3,813,216	-				+0.1