Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16395

Experiment: R2A_PIPES no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES no stress control
3,607,262	+		LRK53_RS16390	0.48	+0.7
3,607,262	+		LRK53_RS16390	0.48	+2.0
3,607,262	+		LRK53_RS16390	0.48	-1.0
3,607,263	-		LRK53_RS16390	0.48	-0.3
3,607,263	-		LRK53_RS16390	0.48	+0.0
3,607,263	-		LRK53_RS16390	0.48	-0.1
3,607,263	-		LRK53_RS16390	0.48	-2.1
3,607,349	+		LRK53_RS16390	0.53	-1.3
3,607,349	+		LRK53_RS16390	0.53	+1.6
3,607,349	+		LRK53_RS16390	0.53	-0.7
3,607,349	+		LRK53_RS16390	0.53	-1.0
3,607,349	+		LRK53_RS16390	0.53	+0.3
3,607,349	+		LRK53_RS16390	0.53	+1.0
3,607,442	+		LRK53_RS16390	0.58	+0.8
3,607,442	+		LRK53_RS16390	0.58	-1.0
3,607,442	+		LRK53_RS16390	0.58	+0.8
3,607,442	+		LRK53_RS16390	0.58	+1.0
3,607,442	+		LRK53_RS16390	0.58	-0.7
3,607,442	+		LRK53_RS16390	0.58	+1.0
3,607,443	-		LRK53_RS16390	0.58	-1.3
3,607,443	-		LRK53_RS16390	0.58	-0.1
3,607,443	-		LRK53_RS16390	0.58	+0.0
3,607,443	-		LRK53_RS16390	0.58	-1.0
3,607,443	-		LRK53_RS16390	0.58	-0.3
3,607,443	-		LRK53_RS16390	0.58	-1.3
3,607,443	-		LRK53_RS16390	0.58	-0.3
3,607,443	-		LRK53_RS16390	0.58	+0.1
3,607,443	-		LRK53_RS16390	0.58	+0.7
3,607,443	-		LRK53_RS16390	0.58	-0.5
3,607,475	+		LRK53_RS16390	0.60	-0.3
3,607,475	+		LRK53_RS16390	0.60	+0.0
3,607,475	+		LRK53_RS16390	0.60	-1.3
3,607,475	+		LRK53_RS16390	0.60	+0.0
3,607,475	+		LRK53_RS16390	0.60	-0.8
3,607,475	+		LRK53_RS16390	0.60	+0.3
3,607,475	+		LRK53_RS16390	0.60	-0.4
3,607,475	+		LRK53_RS16390	0.60	+0.0
3,607,476	-		LRK53_RS16390	0.60	-1.4
3,607,476	-		LRK53_RS16390	0.60	-1.1
3,607,476	-		LRK53_RS16390	0.60	+0.3
3,607,476	-		LRK53_RS16390	0.60	-0.5
3,607,476	-		LRK53_RS16390	0.60	-0.7
3,607,571	+		LRK53_RS16390	0.65	-0.2
3,607,571	+		LRK53_RS16390	0.65	+0.0
3,607,733	+		LRK53_RS16390	0.74	-0.9
3,607,839	+		LRK53_RS16390	0.79	-0.3
3,607,839	+		LRK53_RS16390	0.79	+1.0
3,607,840	-		LRK53_RS16390	0.79	+1.0
3,607,840	-		LRK53_RS16390	0.79	-2.0
3,607,847	+		LRK53_RS16390	0.80	+0.6
3,607,847	+		LRK53_RS16390	0.80	-1.4
3,607,848	-		LRK53_RS16390	0.80	+1.0
3,607,885	+		LRK53_RS16390	0.82	+0.0
3,607,885	+		LRK53_RS16390	0.82	+0.6
3,607,886	-		LRK53_RS16390	0.82	-0.4
3,607,886	-		LRK53_RS16390	0.82	+0.0
3,607,928	+		LRK53_RS16390	0.84	-0.3
3,607,928	+		LRK53_RS16390	0.84	-0.5
3,607,928	+		LRK53_RS16390	0.84	-0.4
3,607,928	+		LRK53_RS16390	0.84	-0.6
3,607,928	+		LRK53_RS16390	0.84	-0.7
3,607,928	+		LRK53_RS16390	0.84	-0.3
3,607,928	+		LRK53_RS16390	0.84	-1.1
3,607,928	+		LRK53_RS16390	0.84	+0.5
3,607,928	+		LRK53_RS16390	0.84	+0.7
3,607,928	+		LRK53_RS16390	0.84	+2.0
3,607,928	+		LRK53_RS16390	0.84	+0.1
3,607,929	-		LRK53_RS16390	0.84	+0.0
3,607,929	-		LRK53_RS16390	0.84	-1.1
3,607,929	-		LRK53_RS16390	0.84	+0.2
3,607,929	-		LRK53_RS16390	0.84	+0.5
3,607,929	-		LRK53_RS16390	0.84	+0.0
3,607,929	-		LRK53_RS16390	0.84	-1.0
3,607,929	-		LRK53_RS16390	0.84	-1.0
3,607,929	-		LRK53_RS16390	0.84	+0.0
3,607,948	+		LRK53_RS16390	0.85	+1.0
3,607,948	+		LRK53_RS16390	0.85	-1.3
3,607,948	+		LRK53_RS16390	0.85	+0.3
3,607,948	+		LRK53_RS16390	0.85	-0.6
3,607,948	+		LRK53_RS16390	0.85	+1.4
3,607,948	+		LRK53_RS16390	0.85	+0.3
3,607,948	+		LRK53_RS16390	0.85	-0.4
3,607,949	-		LRK53_RS16390	0.85	-0.3
3,607,949	-		LRK53_RS16390	0.85	-0.8
3,607,949	-		LRK53_RS16390	0.85	-1.9
3,607,949	-		LRK53_RS16390	0.85	+0.0
3,607,949	-		LRK53_RS16390	0.85	-0.5
3,607,949	-		LRK53_RS16390	0.85	+0.5
3,607,968	+		LRK53_RS16390	0.86	-1.1
3,607,968	+		LRK53_RS16390	0.86	-1.1
3,607,968	+		LRK53_RS16390	0.86	-1.3
3,607,968	+		LRK53_RS16390	0.86	-0.3
3,607,969	-		LRK53_RS16390	0.86	+1.6
3,607,976	+		LRK53_RS16390	0.87	+0.0
3,607,976	+		LRK53_RS16390	0.87	+0.2
3,607,976	+		LRK53_RS16390	0.87	-0.5
3,607,976	+		LRK53_RS16390	0.87	-1.0
3,607,998	+		LRK53_RS16390	0.88	+0.0
3,608,104	+				+0.0
3,608,104	+				-1.5
3,608,105	-				-1.5
3,608,109	+				-0.7
3,608,211	+				-0.3
3,608,211	+				-0.4
3,608,211	+				-2.3
3,608,211	+				-1.8
3,608,211	+				+0.8
3,608,211	+				-1.0
3,608,211	+				-0.9
3,608,212	-				-2.5
3,608,212	-				-1.8
3,608,212	-				-0.5
3,608,212	-				+0.1
3,608,380	+				-0.3
3,608,380	+				-0.5
3,608,381	-				-2.1
3,608,395	+				+1.0
3,608,395	+				-0.2
3,608,395	+				-1.0
3,608,395	+				-0.3
3,608,395	+				-0.8
3,608,396	-				-0.8
3,608,396	-				-0.5
3,608,396	-				-0.5
3,608,396	-				-0.5
3,608,396	-				-1.5
3,608,413	+				-1.5
3,608,413	+				+0.0
3,608,413	+				-2.4
3,608,413	+				+0.0
3,608,413	+				+1.6
3,608,413	+				-1.7
3,608,413	+				+1.0
3,608,413	+				-1.5
3,608,413	+				-1.7
3,608,413	+				+0.2
3,608,413	+				+0.0
3,608,414	-				-1.3
3,608,414	-				+0.6
3,608,414	-				+0.0
3,608,414	-				-1.8
3,608,414	-				-1.5
3,608,414	-				-0.0
3,608,414	-				-1.4
3,608,828	+		LRK53_RS16395	0.29	-0.2
3,608,848	+		LRK53_RS16395	0.30	+0.0
3,608,849	-		LRK53_RS16395	0.30	-0.8
3,608,849	-		LRK53_RS16395	0.30	+0.8
3,608,849	-		LRK53_RS16395	0.30	-0.3
3,608,975	-		LRK53_RS16395	0.36	-0.9
3,609,010	+		LRK53_RS16395	0.38	-0.7
3,609,010	+		LRK53_RS16395	0.38	-1.0
3,609,010	+		LRK53_RS16395	0.38	-1.8
3,609,010	+		LRK53_RS16395	0.38	-0.7
3,609,010	+		LRK53_RS16395	0.38	+0.0
3,609,010	+		LRK53_RS16395	0.38	-3.0
3,609,010	+		LRK53_RS16395	0.38	-1.0
3,609,010	+		LRK53_RS16395	0.38	-1.0
3,609,010	+		LRK53_RS16395	0.38	-0.8
3,609,010	+		LRK53_RS16395	0.38	-1.3
3,609,010	+		LRK53_RS16395	0.38	+1.0
3,609,010	+		LRK53_RS16395	0.38	+0.1
3,609,010	+		LRK53_RS16395	0.38	+0.5
3,609,011	-		LRK53_RS16395	0.38	+0.0
3,609,011	-		LRK53_RS16395	0.38	-1.0
3,609,011	-		LRK53_RS16395	0.38	-0.5
3,609,011	-		LRK53_RS16395	0.38	+0.3
3,609,011	-		LRK53_RS16395	0.38	+0.5
3,609,011	-		LRK53_RS16395	0.38	-1.8
3,609,011	-		LRK53_RS16395	0.38	+1.0
3,609,011	-		LRK53_RS16395	0.38	+0.6
3,609,011	-		LRK53_RS16395	0.38	-1.3
3,609,011	-		LRK53_RS16395	0.38	-0.5
3,609,011	-		LRK53_RS16395	0.38	+0.6
3,609,011	-		LRK53_RS16395	0.38	+0.0
3,609,011	-		LRK53_RS16395	0.38	-0.4
3,609,011	-		LRK53_RS16395	0.38	-0.3
3,609,011	-		LRK53_RS16395	0.38	+0.0
3,609,011	-		LRK53_RS16395	0.38	+0.9
3,609,065	+		LRK53_RS16395	0.41	+0.0
3,609,065	+		LRK53_RS16395	0.41	+0.0
3,609,065	+		LRK53_RS16395	0.41	-0.7
3,609,065	+		LRK53_RS16395	0.41	-1.0
3,609,066	-		LRK53_RS16395	0.41	-1.1
3,609,066	-		LRK53_RS16395	0.41	-1.5
3,609,066	-		LRK53_RS16395	0.41	-1.8
3,609,154	-		LRK53_RS16395	0.45	+0.2
3,609,165	+		LRK53_RS16395	0.46	+0.2
3,609,165	+		LRK53_RS16395	0.46	+0.2
3,609,165	+		LRK53_RS16395	0.46	-0.3
3,609,166	-		LRK53_RS16395	0.46	+0.0
3,609,166	-		LRK53_RS16395	0.46	-2.1
3,609,166	-		LRK53_RS16395	0.46	+0.6
3,609,166	-		LRK53_RS16395	0.46	-1.0
3,609,166	-		LRK53_RS16395	0.46	-0.4
3,609,166	-		LRK53_RS16395	0.46	-0.5
3,609,166	-		LRK53_RS16395	0.46	-1.9
3,609,166	-		LRK53_RS16395	0.46	+0.6
3,609,166	-		LRK53_RS16395	0.46	+0.7
3,609,166	-		LRK53_RS16395	0.46	+0.7
3,609,197	+		LRK53_RS16395	0.47	+0.0
3,609,198	-		LRK53_RS16395	0.47	+1.0
3,609,211	+		LRK53_RS16395	0.48	+1.2
3,609,212	-		LRK53_RS16395	0.48	-1.0
3,609,279	+		LRK53_RS16395	0.51	-0.5
3,609,347	+		LRK53_RS16395	0.54	-0.3
3,609,631	+		LRK53_RS16395	0.68	-0.7
3,609,631	+		LRK53_RS16395	0.68	+0.8
3,609,631	+		LRK53_RS16395	0.68	+0.0
3,609,631	+		LRK53_RS16395	0.68	-0.8
3,609,631	+		LRK53_RS16395	0.68	-2.1
3,609,631	+		LRK53_RS16395	0.68	+0.3
3,609,631	+		LRK53_RS16395	0.68	-1.5
3,609,632	-		LRK53_RS16395	0.68	+0.0
3,609,632	-		LRK53_RS16395	0.68	-1.0
3,609,632	-		LRK53_RS16395	0.68	-1.0
3,609,632	-		LRK53_RS16395	0.68	-0.3
3,609,651	+		LRK53_RS16395	0.69	-1.0
3,609,651	+		LRK53_RS16395	0.69	-1.0
3,609,652	-		LRK53_RS16395	0.69	-1.8
3,609,652	-		LRK53_RS16395	0.69	-0.8
3,609,652	-		LRK53_RS16395	0.69	+0.0
3,609,655	+		LRK53_RS16395	0.69	+0.3
3,609,655	+		LRK53_RS16395	0.69	-0.3
3,609,655	+		LRK53_RS16395	0.69	+1.0
3,609,656	-		LRK53_RS16395	0.69	+0.6
3,609,656	-		LRK53_RS16395	0.69	+2.0
3,609,656	-		LRK53_RS16395	0.69	-0.4
3,609,688	+		LRK53_RS16395	0.71	-0.1
3,609,688	+		LRK53_RS16395	0.71	+0.2
3,609,688	+		LRK53_RS16395	0.71	-1.3
3,609,688	+		LRK53_RS16395	0.71	+1.0
3,609,688	+		LRK53_RS16395	0.71	-0.8
3,609,688	+		LRK53_RS16395	0.71	+0.0
3,609,689	-		LRK53_RS16395	0.71	+0.0
3,609,689	-		LRK53_RS16395	0.71	+1.0
3,609,689	-		LRK53_RS16395	0.71	+2.4
3,609,689	-		LRK53_RS16395	0.71	+0.0
3,609,793	+		LRK53_RS16395	0.76	-1.0
3,609,793	+		LRK53_RS16395	0.76	-1.5
3,609,793	+		LRK53_RS16395	0.76	-0.2
3,609,793	+		LRK53_RS16395	0.76	-1.5
3,609,794	-		LRK53_RS16395	0.76	-0.5
3,609,794	-		LRK53_RS16395	0.76	-1.2
3,609,794	-		LRK53_RS16395	0.76	-0.8
3,609,794	-		LRK53_RS16395	0.76	-1.8
3,609,885	+		LRK53_RS16395	0.80	+1.0
3,609,885	+		LRK53_RS16395	0.80	+0.2
3,610,017	+		LRK53_RS16395	0.87	-2.2
3,610,017	+		LRK53_RS16395	0.87	+0.4
3,610,017	+		LRK53_RS16395	0.87	-1.3
3,610,017	+		LRK53_RS16395	0.87	-0.4
3,610,018	-		LRK53_RS16395	0.87	+0.5
3,610,018	-		LRK53_RS16395	0.87	-0.5
3,610,018	-		LRK53_RS16395	0.87	-1.3
3,610,018	-		LRK53_RS16395	0.87	+1.4
3,610,018	-		LRK53_RS16395	0.87	-0.8
3,610,018	-		LRK53_RS16395	0.87	+1.0
3,610,018	-		LRK53_RS16395	0.87	+2.0
3,610,018	-		LRK53_RS16395	0.87	+0.0
3,610,027	+		LRK53_RS16395	0.87	+0.0
3,610,027	+		LRK53_RS16395	0.87	+1.6
3,610,027	+		LRK53_RS16395	0.87	+0.2
3,610,216	+				+0.0
3,610,216	+				-1.0
3,610,216	+				+2.0
3,610,216	+				+0.3
3,610,217	-				+0.2
3,610,217	-				+0.0
3,610,220	+				-0.4
3,610,220	+				-2.4
3,610,220	+				+0.6
3,610,220	+				-1.5
3,610,221	-				-1.0
3,610,221	-				+0.0
3,610,221	-				+0.2
3,610,221	-				-0.5
3,610,221	-				-1.2
3,610,221	-				+0.0
3,610,221	-				-0.5
3,610,221	-				+3.0
3,610,289	-				-0.5
3,610,295	+				+0.5
3,610,296	-				+0.0
3,610,296	-				-0.8
3,610,300	-				+0.1
3,610,308	+				-0.5
3,610,308	+				-1.3
3,610,309	-				-1.3
3,610,309	-				-1.5
3,610,459	-				-0.3
3,610,493	+		LRK53_RS16400	0.12	-0.3
3,610,493	+		LRK53_RS16400	0.12	+1.0
3,610,493	+		LRK53_RS16400	0.12	+0.3
3,610,494	-		LRK53_RS16400	0.12	-1.3
3,610,494	-		LRK53_RS16400	0.12	+0.0
3,610,530	+		LRK53_RS16400	0.15	+0.0
3,610,533	+		LRK53_RS16400	0.15	+0.6
3,610,533	+		LRK53_RS16400	0.15	-1.1
3,610,534	-		LRK53_RS16400	0.15	+0.2
3,610,534	-		LRK53_RS16400	0.15	-1.5
3,610,566	+		LRK53_RS16400	0.18	-1.0
3,610,581	+		LRK53_RS16400	0.19	-1.7
3,610,582	-		LRK53_RS16400	0.19	-0.7
3,610,582	-		LRK53_RS16400	0.19	-3.0
3,610,608	+		LRK53_RS16400	0.21	-0.1
3,610,608	+		LRK53_RS16400	0.21	-1.0
3,610,608	+		LRK53_RS16400	0.21	-0.1
3,610,609	-		LRK53_RS16400	0.21	-0.8
3,610,609	-		LRK53_RS16400	0.21	-1.4
3,610,609	-		LRK53_RS16400	0.21	+0.0
3,610,609	-		LRK53_RS16400	0.21	-0.2
3,610,626	+		LRK53_RS16400	0.22	-0.8
3,610,626	+		LRK53_RS16400	0.22	-0.6
3,610,626	+		LRK53_RS16400	0.22	+2.0
3,610,627	-		LRK53_RS16400	0.22	-1.3
3,610,627	-		LRK53_RS16400	0.22	+0.2
3,610,627	-		LRK53_RS16400	0.22	+1.0
3,610,627	-		LRK53_RS16400	0.22	-0.7
3,610,627	-		LRK53_RS16400	0.22	-1.3
3,610,684	+		LRK53_RS16400	0.27	-1.3
3,610,684	+		LRK53_RS16400	0.27	+0.5
3,610,685	-		LRK53_RS16400	0.27	-0.2
3,610,685	-		LRK53_RS16400	0.27	-0.4
3,610,685	-		LRK53_RS16400	0.27	-1.7
3,610,685	-		LRK53_RS16400	0.27	-1.0
3,610,819	-		LRK53_RS16400	0.38	+0.0
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