Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08725

Experiment: R2A_PIPES no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES no stress control
1,960,974	+		LRK53_RS08720	0.55	-1.7
1,961,187	+		LRK53_RS08720	0.65	-0.7
1,961,187	+		LRK53_RS08720	0.65	+0.2
1,961,187	+		LRK53_RS08720	0.65	-0.7
1,961,187	+		LRK53_RS08720	0.65	-0.8
1,961,188	-		LRK53_RS08720	0.65	+1.9
1,961,188	-		LRK53_RS08720	0.65	+0.3
1,961,188	-		LRK53_RS08720	0.65	-0.1
1,961,188	-		LRK53_RS08720	0.65	+0.1
1,961,241	+		LRK53_RS08720	0.68	-0.3
1,961,241	+		LRK53_RS08720	0.68	-0.7
1,961,242	-		LRK53_RS08720	0.68	-0.5
1,961,242	-		LRK53_RS08720	0.68	+1.9
1,961,265	+		LRK53_RS08720	0.69	+0.1
1,961,266	-		LRK53_RS08720	0.69	-0.1
1,961,299	-		LRK53_RS08720	0.71	-0.4
1,961,299	-		LRK53_RS08720	0.71	-0.7
1,961,375	+		LRK53_RS08720	0.74	-1.2
1,961,376	-		LRK53_RS08720	0.74	+0.1
1,961,376	-		LRK53_RS08720	0.74	-0.1
1,961,376	-		LRK53_RS08720	0.74	-1.4
1,961,403	+		LRK53_RS08720	0.76	-1.2
1,961,404	-		LRK53_RS08720	0.76	-1.7
1,961,579	+		LRK53_RS08720	0.84	-0.1
1,961,579	+		LRK53_RS08720	0.84	-0.1
1,961,579	+		LRK53_RS08720	0.84	+0.9
1,961,579	+		LRK53_RS08720	0.84	-0.5
1,961,580	-		LRK53_RS08720	0.84	-2.1
1,961,580	-		LRK53_RS08720	0.84	-1.0
1,961,580	-		LRK53_RS08720	0.84	-0.9
1,961,580	-		LRK53_RS08720	0.84	+0.9
1,961,580	-		LRK53_RS08720	0.84	-0.1
1,961,840	-				-0.1
1,961,848	-				-0.9
1,961,896	+				+0.5
1,961,896	+				-1.1
1,961,967	+				-0.1
1,961,967	+				-0.9
1,961,967	+				-0.1
1,961,967	+				-0.7
1,961,967	+				-0.4
1,961,968	-				-1.4
1,962,033	+				-0.1
1,962,033	+				-1.2
1,962,033	+				-0.9
1,962,033	+				-1.9
1,962,034	-				+0.6
1,962,034	-				+1.5
1,962,034	-				-0.4
1,962,034	-				-2.5
1,962,034	-				-0.5
1,962,034	-				-0.1
1,962,045	+				+0.9
1,962,045	+				-1.0
1,962,046	-				+2.5
1,962,046	-				-0.1
1,962,046	-				-1.0
1,962,046	-				-2.3
1,962,046	-				-0.7
1,962,171	+				+0.5
1,962,171	+				+1.7
1,962,172	-				-0.7
1,962,172	-				-1.1
1,962,193	-		LRK53_RS08725	0.10	-1.4
1,962,203	+		LRK53_RS08725	0.11	+0.5
1,962,203	+		LRK53_RS08725	0.11	+1.9
1,962,203	+		LRK53_RS08725	0.11	+0.9
1,962,203	+		LRK53_RS08725	0.11	-0.5
1,962,203	+		LRK53_RS08725	0.11	-0.1
1,962,203	+		LRK53_RS08725	0.11	-2.4
1,962,204	-		LRK53_RS08725	0.11	-0.1
1,962,240	+		LRK53_RS08725	0.13	+0.4
1,962,240	+		LRK53_RS08725	0.13	-0.8
1,962,240	+		LRK53_RS08725	0.13	-1.9
1,962,240	+		LRK53_RS08725	0.13	-0.1
1,962,241	-		LRK53_RS08725	0.13	-2.3
1,962,264	+		LRK53_RS08725	0.14	-0.1
1,962,264	+		LRK53_RS08725	0.14	-0.1
1,962,265	-		LRK53_RS08725	0.14	+0.6
1,962,276	+		LRK53_RS08725	0.14	-0.0
1,962,277	-		LRK53_RS08725	0.14	-1.1
1,962,277	-		LRK53_RS08725	0.14	-1.9
1,962,277	-		LRK53_RS08725	0.14	-0.7
1,962,277	-		LRK53_RS08725	0.14	-0.8
1,962,277	-		LRK53_RS08725	0.14	+0.9
1,962,277	-		LRK53_RS08725	0.14	+1.3
1,962,340	-		LRK53_RS08725	0.17	+0.9
1,962,354	+		LRK53_RS08725	0.18	-0.4
1,962,382	-		LRK53_RS08725	0.19	-0.6
1,962,382	-		LRK53_RS08725	0.19	-0.9
1,962,400	-		LRK53_RS08725	0.20	+0.2
1,962,447	-		LRK53_RS08725	0.22	+0.4
1,962,468	+		LRK53_RS08725	0.23	+0.9
1,962,468	+		LRK53_RS08725	0.23	-0.4
1,962,468	+		LRK53_RS08725	0.23	-1.4
1,962,468	+		LRK53_RS08725	0.23	-0.5
1,962,468	+		LRK53_RS08725	0.23	-1.5
1,962,469	-		LRK53_RS08725	0.23	-1.1
1,962,469	-		LRK53_RS08725	0.23	+0.1
1,962,469	-		LRK53_RS08725	0.23	-0.9
1,962,469	-		LRK53_RS08725	0.23	-0.6
1,962,469	-		LRK53_RS08725	0.23	-0.5
1,962,469	-		LRK53_RS08725	0.23	-0.1
1,962,579	+		LRK53_RS08725	0.28	+0.9
1,962,579	+		LRK53_RS08725	0.28	+0.5
1,962,579	+		LRK53_RS08725	0.28	-0.8
1,962,580	-		LRK53_RS08725	0.28	-0.7
1,962,669	+		LRK53_RS08725	0.32	-1.1
1,962,669	+		LRK53_RS08725	0.32	-0.1
1,962,670	-		LRK53_RS08725	0.32	-2.9
1,962,670	-		LRK53_RS08725	0.32	-1.0
1,962,670	-		LRK53_RS08725	0.32	+0.7
1,962,678	+		LRK53_RS08725	0.32	+2.5
1,962,678	+		LRK53_RS08725	0.32	-0.5
1,962,752	+		LRK53_RS08725	0.35	-1.1
1,962,753	-		LRK53_RS08725	0.35	-0.5
1,962,753	-		LRK53_RS08725	0.35	+1.9
1,962,753	-		LRK53_RS08725	0.35	-0.4
1,962,753	-		LRK53_RS08725	0.35	-0.6
1,962,753	-		LRK53_RS08725	0.35	-0.3
1,962,753	-		LRK53_RS08725	0.35	-0.1
1,962,861	+		LRK53_RS08725	0.40	-0.1
1,962,861	+		LRK53_RS08725	0.40	-0.9
1,962,917	+		LRK53_RS08725	0.43	-0.2
1,962,917	+		LRK53_RS08725	0.43	+2.2
1,962,917	+		LRK53_RS08725	0.43	-0.4
1,962,917	+		LRK53_RS08725	0.43	+0.3
1,962,917	+		LRK53_RS08725	0.43	+0.9
1,962,917	+		LRK53_RS08725	0.43	-0.1
1,962,917	+		LRK53_RS08725	0.43	-0.3
1,962,918	-		LRK53_RS08725	0.43	-1.3
1,962,918	-		LRK53_RS08725	0.43	-0.7
1,962,918	-		LRK53_RS08725	0.43	+0.9
1,962,918	-		LRK53_RS08725	0.43	+0.2
1,962,918	-		LRK53_RS08725	0.43	-0.5
1,962,918	-		LRK53_RS08725	0.43	+0.2
1,962,918	-		LRK53_RS08725	0.43	-0.9
1,962,918	-		LRK53_RS08725	0.43	+0.3
1,962,918	-		LRK53_RS08725	0.43	+0.2
1,962,918	-		LRK53_RS08725	0.43	-0.7
1,962,918	-		LRK53_RS08725	0.43	+1.9
1,963,012	-		LRK53_RS08725	0.47	-0.7
1,963,012	-		LRK53_RS08725	0.47	-0.2
1,963,029	+		LRK53_RS08725	0.48	+0.3
1,963,029	+		LRK53_RS08725	0.48	-1.1
1,963,029	+		LRK53_RS08725	0.48	-0.4
1,963,029	+		LRK53_RS08725	0.48	-1.0
1,963,029	+		LRK53_RS08725	0.48	+0.9
1,963,029	+		LRK53_RS08725	0.48	+0.6
1,963,030	-		LRK53_RS08725	0.48	-1.9
1,963,030	-		LRK53_RS08725	0.48	-1.1
1,963,030	-		LRK53_RS08725	0.48	-0.1
1,963,030	-		LRK53_RS08725	0.48	+0.9
1,963,030	-		LRK53_RS08725	0.48	-1.3
1,963,030	-		LRK53_RS08725	0.48	-1.1
1,963,030	-		LRK53_RS08725	0.48	-0.5
1,963,030	-		LRK53_RS08725	0.48	-0.7
1,963,030	-		LRK53_RS08725	0.48	-0.6
1,963,030	-		LRK53_RS08725	0.48	-0.6
1,963,032	+		LRK53_RS08725	0.48	-0.7
1,963,032	+		LRK53_RS08725	0.48	-1.1
1,963,032	+		LRK53_RS08725	0.48	-0.4
1,963,032	+		LRK53_RS08725	0.48	+1.7
1,963,032	+		LRK53_RS08725	0.48	-1.7
1,963,032	+		LRK53_RS08725	0.48	-0.1
1,963,032	+		LRK53_RS08725	0.48	+0.5
1,963,032	+		LRK53_RS08725	0.48	-0.7
1,963,032	+		LRK53_RS08725	0.48	+0.9
1,963,033	-		LRK53_RS08725	0.48	-0.4
1,963,033	-		LRK53_RS08725	0.48	-0.1
1,963,033	-		LRK53_RS08725	0.48	-1.1
1,963,033	-		LRK53_RS08725	0.48	-0.1
1,963,033	-		LRK53_RS08725	0.48	-1.4
1,963,033	-		LRK53_RS08725	0.48	-1.1
1,963,033	-		LRK53_RS08725	0.48	+0.5
1,963,033	-		LRK53_RS08725	0.48	-2.1
1,963,113	+		LRK53_RS08725	0.52	-0.4
1,963,113	+		LRK53_RS08725	0.52	+0.6
1,963,113	+		LRK53_RS08725	0.52	-1.9
1,963,114	-		LRK53_RS08725	0.52	-1.1
1,963,176	+		LRK53_RS08725	0.54	-1.7
1,963,219	-		LRK53_RS08725	0.56	+0.9
1,963,219	-		LRK53_RS08725	0.56	-0.8
1,963,219	-		LRK53_RS08725	0.56	-1.9
1,963,257	+		LRK53_RS08725	0.58	-1.3
1,963,258	-		LRK53_RS08725	0.58	-0.7
1,963,356	+		LRK53_RS08725	0.62	+0.3
1,963,357	-		LRK53_RS08725	0.63	+0.3
1,963,357	-		LRK53_RS08725	0.63	+0.9
1,963,374	+		LRK53_RS08725	0.63	-0.6
1,963,374	+		LRK53_RS08725	0.63	-0.1
1,963,374	+		LRK53_RS08725	0.63	-0.6
1,963,374	+		LRK53_RS08725	0.63	-0.4
1,963,374	+		LRK53_RS08725	0.63	+1.9
1,963,374	+		LRK53_RS08725	0.63	+0.3
1,963,374	+		LRK53_RS08725	0.63	-0.4
1,963,374	+		LRK53_RS08725	0.63	+1.9
1,963,375	-		LRK53_RS08725	0.63	+0.3
1,963,375	-		LRK53_RS08725	0.63	-0.7
1,963,375	-		LRK53_RS08725	0.63	-0.1
1,963,375	-		LRK53_RS08725	0.63	-0.4
1,963,375	-		LRK53_RS08725	0.63	-0.9
1,963,375	-		LRK53_RS08725	0.63	-0.7
1,963,375	-		LRK53_RS08725	0.63	-1.1
1,963,439	+		LRK53_RS08725	0.66	-0.3
1,963,440	-		LRK53_RS08725	0.66	-2.9
1,963,482	+		LRK53_RS08725	0.68	-0.4
1,963,482	+		LRK53_RS08725	0.68	-0.1
1,963,483	-		LRK53_RS08725	0.68	-0.8
1,963,483	-		LRK53_RS08725	0.68	+0.6
1,963,483	-		LRK53_RS08725	0.68	-1.8
1,963,503	+		LRK53_RS08725	0.69	-0.2
1,963,503	+		LRK53_RS08725	0.69	-0.7
1,963,503	+		LRK53_RS08725	0.69	+0.9
1,963,503	+		LRK53_RS08725	0.69	-0.3
1,963,503	+		LRK53_RS08725	0.69	+0.2
1,963,503	+		LRK53_RS08725	0.69	-1.2
1,963,503	+		LRK53_RS08725	0.69	+0.5
1,963,504	-		LRK53_RS08725	0.69	-0.7
1,963,504	-		LRK53_RS08725	0.69	-0.4
1,963,504	-		LRK53_RS08725	0.69	-1.7
1,963,504	-		LRK53_RS08725	0.69	-0.2
1,963,504	-		LRK53_RS08725	0.69	+0.3
1,963,504	-		LRK53_RS08725	0.69	-0.1
1,963,504	-		LRK53_RS08725	0.69	+2.5
1,963,504	-		LRK53_RS08725	0.69	+1.9
1,963,504	-		LRK53_RS08725	0.69	-1.7
1,963,504	-		LRK53_RS08725	0.69	-0.1
1,963,554	+		LRK53_RS08725	0.71	+0.0
1,963,554	+		LRK53_RS08725	0.71	-0.3
1,963,554	+		LRK53_RS08725	0.71	-1.1
1,963,554	+		LRK53_RS08725	0.71	-0.6
1,963,554	+		LRK53_RS08725	0.71	+0.2
1,963,555	-		LRK53_RS08725	0.71	-0.3
1,963,555	-		LRK53_RS08725	0.71	-0.2
1,963,555	-		LRK53_RS08725	0.71	+0.5
1,963,555	-		LRK53_RS08725	0.71	-0.9
1,963,555	-		LRK53_RS08725	0.71	-0.3
1,963,707	+		LRK53_RS08725	0.78	+1.2
1,963,749	-		LRK53_RS08725	0.80	+0.9
1,963,755	+		LRK53_RS08725	0.80	-0.1
1,963,755	+		LRK53_RS08725	0.80	-0.3
1,963,755	+		LRK53_RS08725	0.80	-1.6
1,963,755	+		LRK53_RS08725	0.80	-0.4
1,963,755	+		LRK53_RS08725	0.80	+0.9
1,963,755	+		LRK53_RS08725	0.80	+1.9
1,963,755	+		LRK53_RS08725	0.80	-0.3
1,963,755	+		LRK53_RS08725	0.80	+0.5
1,963,755	+		LRK53_RS08725	0.80	+0.2
1,963,756	-		LRK53_RS08725	0.80	-0.7
1,964,045	+				-1.5
1,964,045	+				-2.1
1,964,046	-				-0.1
1,964,046	-				-1.5
1,964,046	-				-1.7
1,964,046	-				-0.4
1,964,056	+				-1.1
1,964,056	+				-1.7
1,964,056	+				-0.1
1,964,057	-				-0.6
1,964,057	-				+1.5
1,964,057	-				+0.3
1,964,057	-				-0.1
1,964,057	-				-1.4
1,964,057	-				-1.2
1,964,057	-				-0.9
1,964,108	-				-1.5
1,964,186	+				-1.5
1,964,186	+				-2.3
1,964,186	+				-0.7
1,964,187	-				-0.7
1,964,187	-				-0.1
1,964,187	-				-0.7
1,964,187	-				-0.4
1,964,218	+				-1.0
1,964,218	+				+0.2
1,964,219	-				-0.6
1,964,219	-				-0.7
1,964,219	-				+1.2
1,964,219	-				+0.0
1,964,313	-		LRK53_RS08730	0.37	-0.9
1,964,313	-		LRK53_RS08730	0.37	-1.4
1,964,313	-		LRK53_RS08730	0.37	-1.1
1,964,313	-		LRK53_RS08730	0.37	-0.7
1,964,342	-		LRK53_RS08730	0.45	-1.3
1,964,618	+				+0.5
1,964,618	+				-1.1
1,964,619	-				-1.9
1,964,619	-				+1.3
1,964,619	-				-0.8
1,964,681	+				-1.4
1,964,682	-				-1.0
1,964,729	+				-0.1
1,964,811	+				-1.1
1,964,811	+				-0.7
1,964,811	+				-2.2
1,964,811	+				-0.3
1,964,812	-				-0.4
1,964,812	-				-0.7
1,964,812	-				-2.5
1,964,812	-				-1.0
1,964,812	-				+1.1
1,964,963	+		LRK53_RS08735	0.14	-0.4
1,964,963	+		LRK53_RS08735	0.14	-1.9
1,964,963	+		LRK53_RS08735	0.14	-0.5
1,964,963	+		LRK53_RS08735	0.14	-0.1
1,964,963	+		LRK53_RS08735	0.14	+0.1
1,964,963	+		LRK53_RS08735	0.14	-0.1
1,964,963	+		LRK53_RS08735	0.14	+1.5
1,964,964	-		LRK53_RS08735	0.14	-1.1
1,964,964	-		LRK53_RS08735	0.14	-1.7
1,964,964	-		LRK53_RS08735	0.14	-0.8
1,965,035	+		LRK53_RS08735	0.20	+0.3
1,965,035	+		LRK53_RS08735	0.20	-0.4
1,965,035	+		LRK53_RS08735	0.20	+0.3
1,965,036	-		LRK53_RS08735	0.20	+0.3
1,965,036	-		LRK53_RS08735	0.20	-2.1
1,965,036	-		LRK53_RS08735	0.20	-1.1
1,965,087	+		LRK53_RS08735	0.25	+0.3
1,965,087	+		LRK53_RS08735	0.25	-0.1
1,965,087	+		LRK53_RS08735	0.25	+0.5
1,965,088	-		LRK53_RS08735	0.25	-0.8
1,965,088	-		LRK53_RS08735	0.25	-1.2
1,965,088	-		LRK53_RS08735	0.25	-1.2
1,965,088	-		LRK53_RS08735	0.25	-2.4
1,965,088	-		LRK53_RS08735	0.25	-0.1
1,965,088	-		LRK53_RS08735	0.25	-1.3
1,965,150	+		LRK53_RS08735	0.30	-0.9
1,965,150	+		LRK53_RS08735	0.30	+0.3
1,965,150	+		LRK53_RS08735	0.30	+0.9
1,965,150	+		LRK53_RS08735	0.30	-0.3
1,965,151	-		LRK53_RS08735	0.30	-0.2
1,965,151	-		LRK53_RS08735	0.30	-0.5
1,965,151	-		LRK53_RS08735	0.30	-0.1
1,965,151	-		LRK53_RS08735	0.30	-0.1
1,965,151	-		LRK53_RS08735	0.30	-0.1
1,965,151	-		LRK53_RS08735	0.30	-0.1
1,965,151	-		LRK53_RS08735	0.30	-0.8
1,965,151	-		LRK53_RS08735	0.30	-0.3
1,965,151	-		LRK53_RS08735	0.30	-1.1