Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS06075

Experiment: R2A_PIPES no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES no stress control
1,396,741	+		LRK53_RS06070	0.18	-1.4
1,396,741	+		LRK53_RS06070	0.18	-0.6
1,396,741	+		LRK53_RS06070	0.18	-0.6
1,396,741	+		LRK53_RS06070	0.18	-1.0
1,396,741	+		LRK53_RS06070	0.18	-0.4
1,396,741	+		LRK53_RS06070	0.18	-0.6
1,396,741	+		LRK53_RS06070	0.18	-0.4
1,396,741	+		LRK53_RS06070	0.18	-0.0
1,396,742	-		LRK53_RS06070	0.18	-0.6
1,396,742	-		LRK53_RS06070	0.18	+3.0
1,396,742	-		LRK53_RS06070	0.18	+1.7
1,396,742	-		LRK53_RS06070	0.18	-0.4
1,396,742	-		LRK53_RS06070	0.18	-0.6
1,396,776	+		LRK53_RS06070	0.26	-0.6
1,396,777	-		LRK53_RS06070	0.27	+0.1
1,396,777	-		LRK53_RS06070	0.27	-0.8
1,396,777	-		LRK53_RS06070	0.27	-0.8
1,396,849	+		LRK53_RS06070	0.44	-0.3
1,396,849	+		LRK53_RS06070	0.44	-0.6
1,396,849	+		LRK53_RS06070	0.44	+0.4
1,396,849	+		LRK53_RS06070	0.44	-1.3
1,396,850	-		LRK53_RS06070	0.44	+1.6
1,396,850	-		LRK53_RS06070	0.44	-0.8
1,396,850	-		LRK53_RS06070	0.44	+1.0
1,396,945	+		LRK53_RS06070	0.67	-0.8
1,396,945	+		LRK53_RS06070	0.67	-0.0
1,396,946	-		LRK53_RS06070	0.67	+0.5
1,396,996	-		LRK53_RS06070	0.79	-0.0
1,397,043	+				-1.5
1,397,043	+				+0.4
1,397,043	+				+1.0
1,397,044	-				+0.5
1,397,044	-				-0.8
1,397,084	+				-1.1
1,397,084	+				-0.0
1,397,084	+				-0.0
1,397,085	-				-0.6
1,397,085	-				-1.5
1,397,085	-				-0.4
1,397,100	+				-0.0
1,397,100	+				-0.7
1,397,100	+				+0.2
1,397,100	+				-0.4
1,397,100	+				+1.7
1,397,100	+				-1.6
1,397,100	+				+0.4
1,397,101	-				-0.9
1,397,101	-				-0.4
1,397,101	-				-2.2
1,397,101	-				-0.8
1,397,101	-				-0.0
1,397,101	-				-0.4
1,397,101	-				+0.2
1,397,101	-				-1.8
1,397,111	+				-1.8
1,397,111	+				-0.4
1,397,111	+				-0.6
1,397,111	+				-0.7
1,397,111	+				-0.5
1,397,111	+				-1.2
1,397,111	+				+1.0
1,397,111	+				-2.0
1,397,111	+				-0.0
1,397,111	+				-0.9
1,397,111	+				+0.6
1,397,111	+				-1.0
1,397,111	+				-2.2
1,397,111	+				-1.1
1,397,111	+				-0.5
1,397,111	+				-2.7
1,397,111	+				-1.8
1,397,111	+				+0.3
1,397,111	+				-1.1
1,397,111	+				+1.0
1,397,112	-				+2.6
1,397,112	-				-1.3
1,397,112	-				-1.9
1,397,112	-				+0.6
1,397,112	-				+0.3
1,397,112	-				-0.3
1,397,112	-				-1.0
1,397,112	-				-2.2
1,397,112	-				-0.8
1,397,112	-				-2.0
1,397,112	-				+0.6
1,397,112	-				-0.9
1,397,112	-				-1.5
1,397,112	-				-1.1
1,397,112	-				-1.2
1,397,112	-				-0.6
1,397,112	-				+2.0
1,397,112	-				-0.0
1,397,112	-				+0.9
1,397,112	-				-1.6
1,397,112	-				-0.5
1,397,112	-				-1.4
1,397,112	-				-0.9
1,397,112	-				-1.0
1,397,112	-				-0.3
1,397,112	-				-0.0
1,397,112	-				+2.0
1,397,112	-				+2.0
1,397,120	+				-0.6
1,397,141	+				+2.0
1,397,142	-				-1.0
1,397,142	-				-0.4
1,397,181	+				+1.0
1,397,181	+				+1.0
1,397,181	+				-0.0
1,397,181	+				-0.0
1,397,181	+				+2.0
1,397,182	-				-0.0
1,397,182	-				-0.9
1,397,182	-				-0.0
1,397,182	-				-0.0
1,397,182	-				-0.0
1,397,182	-				+0.2
1,397,256	+				-0.5
1,397,256	+				-1.6
1,397,257	-				+0.6
1,397,305	+				-0.6
1,397,305	+				-0.8
1,397,305	+				-0.6
1,397,305	+				-0.0
1,397,305	+				-0.7
1,397,305	+				-0.8
1,397,305	+				-1.3
1,397,305	+				-0.0
1,397,305	+				+0.4
1,397,305	+				+1.0
1,397,305	+				-0.6
1,397,305	+				-1.6
1,397,305	+				+1.0
1,397,305	+				+1.0
1,397,305	+				-0.6
1,397,305	+				-2.2
1,397,305	+				-0.3
1,397,305	+				+0.1
1,397,305	+				-1.4
1,397,305	+				-0.3
1,397,305	+				-1.4
1,397,305	+				+1.0
1,397,305	+				-1.6
1,397,306	-				+1.0
1,397,306	-				-0.4
1,397,306	-				-0.0
1,397,306	-				+1.0
1,397,306	-				+1.6
1,397,306	-				-0.0
1,397,306	-				-1.0
1,397,306	-				-0.6
1,397,306	-				-0.0
1,397,306	-				+0.4
1,397,306	-				-0.4
1,397,391	+				-0.6
1,397,392	-				+1.0
1,397,416	+				-1.6
1,397,416	+				-0.6
1,397,416	+				-0.1
1,397,416	+				-0.0
1,397,416	+				+0.6
1,397,416	+				+0.6
1,397,416	+				+1.0
1,397,416	+				-0.0
1,397,416	+				-1.1
1,397,416	+				-0.4
1,397,416	+				-0.8
1,397,416	+				-1.4
1,397,417	-				+0.2
1,397,417	-				-0.5
1,397,417	-				+0.4
1,397,417	-				+0.4
1,397,417	-				-1.4
1,397,417	-				-0.0
1,397,603	+				-1.0
1,397,604	-				-0.0
1,397,612	-				-1.0
1,397,683	+				-1.6
1,397,859	+		LRK53_RS06075	0.18	+0.2
1,397,860	-		LRK53_RS06075	0.18	-1.4
1,398,060	+		LRK53_RS06075	0.42	-2.1
1,398,060	+		LRK53_RS06075	0.42	-0.4
1,398,061	-		LRK53_RS06075	0.42	-0.6
1,398,061	-		LRK53_RS06075	0.42	-0.4
1,398,061	-		LRK53_RS06075	0.42	-0.4
1,398,122	+		LRK53_RS06075	0.49	-1.4
1,398,123	-		LRK53_RS06075	0.49	-0.0
1,398,135	+		LRK53_RS06075	0.51	-1.0
1,398,135	+		LRK53_RS06075	0.51	-0.0
1,398,136	-		LRK53_RS06075	0.51	-1.0
1,398,136	-		LRK53_RS06075	0.51	-1.6
1,398,136	-		LRK53_RS06075	0.51	-0.0
1,398,366	+		LRK53_RS06075	0.78	-0.6
1,398,366	+		LRK53_RS06075	0.78	-1.0
1,398,367	-		LRK53_RS06075	0.78	-0.6
1,398,367	-		LRK53_RS06075	0.78	-1.0
1,398,375	+		LRK53_RS06075	0.79	-1.7
1,398,375	+		LRK53_RS06075	0.79	-1.0
1,398,376	-		LRK53_RS06075	0.79	-1.3
1,398,552	+				+0.1
1,398,552	+				-0.6
1,398,552	+				-2.0
1,398,552	+				-0.0
1,398,553	-				+0.6
1,398,553	-				-1.4
1,398,553	-				-0.0
1,398,553	-				-1.0
1,398,747	-		LRK53_RS06080	0.25	+1.0
1,398,791	+		LRK53_RS06080	0.33	+0.4
1,398,791	+		LRK53_RS06080	0.33	-0.0
1,398,791	+		LRK53_RS06080	0.33	-0.0
1,398,791	+		LRK53_RS06080	0.33	-0.6
1,398,791	+		LRK53_RS06080	0.33	-1.3
1,398,791	+		LRK53_RS06080	0.33	-1.6
1,398,791	+		LRK53_RS06080	0.33	+0.6
1,398,791	+		LRK53_RS06080	0.33	+1.0
1,398,791	+		LRK53_RS06080	0.33	-0.2
1,398,791	+		LRK53_RS06080	0.33	-1.4
1,398,791	+		LRK53_RS06080	0.33	-0.0
1,398,791	+		LRK53_RS06080	0.33	-0.6
1,398,791	+		LRK53_RS06080	0.33	+1.0
1,398,791	+		LRK53_RS06080	0.33	-0.4
1,398,792	-		LRK53_RS06080	0.33	+1.7
1,398,792	-		LRK53_RS06080	0.33	-1.0
1,398,792	-		LRK53_RS06080	0.33	-0.8
1,398,792	-		LRK53_RS06080	0.33	-0.0
1,398,792	-		LRK53_RS06080	0.33	-1.0
1,398,792	-		LRK53_RS06080	0.33	+0.2
1,398,792	-		LRK53_RS06080	0.33	-0.6
1,398,792	-		LRK53_RS06080	0.33	+0.4
1,398,792	-		LRK53_RS06080	0.33	+1.0
1,398,792	-		LRK53_RS06080	0.33	-0.0
1,398,792	-		LRK53_RS06080	0.33	+1.7
1,398,812	+		LRK53_RS06080	0.36	-1.5
1,398,812	+		LRK53_RS06080	0.36	-1.7
1,398,812	+		LRK53_RS06080	0.36	+0.2
1,398,812	+		LRK53_RS06080	0.36	-0.6
1,398,812	+		LRK53_RS06080	0.36	-1.2
1,398,812	+		LRK53_RS06080	0.36	-1.4
1,398,812	+		LRK53_RS06080	0.36	-1.8
1,398,812	+		LRK53_RS06080	0.36	-0.2
1,398,812	+		LRK53_RS06080	0.36	-0.0
1,398,813	-		LRK53_RS06080	0.37	-1.8
1,398,813	-		LRK53_RS06080	0.37	-2.0
1,398,813	-		LRK53_RS06080	0.37	-0.0
1,398,813	-		LRK53_RS06080	0.37	-0.3
1,398,813	-		LRK53_RS06080	0.37	-1.4
1,398,909	+		LRK53_RS06080	0.54	+1.2
1,398,909	+		LRK53_RS06080	0.54	-1.0
1,398,909	+		LRK53_RS06080	0.54	-1.7
1,398,909	+		LRK53_RS06080	0.54	+1.0
1,398,909	+		LRK53_RS06080	0.54	+1.0
1,398,909	+		LRK53_RS06080	0.54	-0.6
1,398,909	+		LRK53_RS06080	0.54	-0.4
1,398,909	+		LRK53_RS06080	0.54	-0.5
1,398,909	+		LRK53_RS06080	0.54	-0.4
1,398,909	+		LRK53_RS06080	0.54	-1.0
1,398,909	+		LRK53_RS06080	0.54	-0.5
1,398,909	+		LRK53_RS06080	0.54	-0.6
1,398,910	+		LRK53_RS06080	0.54	-0.0
1,398,910	-		LRK53_RS06080	0.54	-1.0
1,398,910	-		LRK53_RS06080	0.54	-0.8
1,398,910	-		LRK53_RS06080	0.54	-1.6
1,398,910	-		LRK53_RS06080	0.54	+1.0
1,398,910	-		LRK53_RS06080	0.54	-0.6
1,398,910	-		LRK53_RS06080	0.54	-0.6
1,398,910	-		LRK53_RS06080	0.54	-0.6
1,398,910	-		LRK53_RS06080	0.54	+1.0
1,398,910	-		LRK53_RS06080	0.54	-1.4
1,398,911	+		LRK53_RS06080	0.54	-0.9
1,398,911	+		LRK53_RS06080	0.54	+1.0
1,398,911	+		LRK53_RS06080	0.54	+2.6
1,398,911	+		LRK53_RS06080	0.54	-0.2
1,398,911	+		LRK53_RS06080	0.54	+0.4
1,398,911	+		LRK53_RS06080	0.54	-0.7
1,398,911	+		LRK53_RS06080	0.54	+1.0
1,398,911	+		LRK53_RS06080	0.54	+1.0
1,398,912	-		LRK53_RS06080	0.54	-1.3
1,398,912	-		LRK53_RS06080	0.54	-0.8
1,398,912	-		LRK53_RS06080	0.54	-0.0
1,398,912	-		LRK53_RS06080	0.54	-0.6
1,398,912	-		LRK53_RS06080	0.54	-2.2
1,398,912	-		LRK53_RS06080	0.54	-1.0
1,398,912	-		LRK53_RS06080	0.54	-1.4
1,398,912	-		LRK53_RS06080	0.54	-0.6
1,398,912	-		LRK53_RS06080	0.54	-0.0
1,398,912	-		LRK53_RS06080	0.54	-1.0
1,398,912	-		LRK53_RS06080	0.54	+0.6
1,398,912	-		LRK53_RS06080	0.54	-1.4
1,398,912	-		LRK53_RS06080	0.54	-1.1
1,399,181	+				-0.6
1,399,181	+				+0.4
1,399,181	+				-0.0
1,399,182	-				+0.2
1,399,206	+				-0.0
1,399,494	+		LRK53_RS06085	0.62	-0.3
1,399,494	+		LRK53_RS06085	0.62	+0.4
1,399,494	+		LRK53_RS06085	0.62	-0.3
1,399,494	+		LRK53_RS06085	0.62	-0.6
1,399,495	-		LRK53_RS06085	0.62	+1.1
1,399,495	-		LRK53_RS06085	0.62	+0.2
1,399,495	-		LRK53_RS06085	0.62	-0.0
1,399,495	-		LRK53_RS06085	0.62	+1.0