Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04895

Experiment: pH5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH5
1,136,355	+		LRK53_RS04885	0.70	-0.3
1,136,355	+		LRK53_RS04885	0.70	-0.4
1,136,355	+		LRK53_RS04885	0.70	-0.1
1,136,355	+		LRK53_RS04885	0.70	+1.0
1,136,355	+		LRK53_RS04885	0.70	-2.0
1,136,355	+		LRK53_RS04885	0.70	+0.4
1,136,355	+		LRK53_RS04885	0.70	-0.6
1,136,355	+		LRK53_RS04885	0.70	-0.4
1,136,356	-		LRK53_RS04885	0.70	-0.6
1,136,356	-		LRK53_RS04885	0.70	-0.5
1,136,365	+		LRK53_RS04885	0.70	-1.3
1,136,366	-		LRK53_RS04885	0.70	-0.2
1,136,388	-		LRK53_RS04885	0.72	-0.5
1,136,487	+		LRK53_RS04885	0.81	-0.0
1,136,487	+		LRK53_RS04885	0.81	+0.4
1,136,488	-		LRK53_RS04885	0.81	-2.6
1,136,488	-		LRK53_RS04885	0.81	-0.5
1,136,502	+		LRK53_RS04885	0.82	-0.6
1,136,502	+		LRK53_RS04885	0.82	+0.5
1,136,502	+		LRK53_RS04885	0.82	-0.4
1,136,503	-		LRK53_RS04885	0.82	-1.0
1,136,503	-		LRK53_RS04885	0.82	+0.6
1,136,503	-		LRK53_RS04885	0.82	+1.5
1,136,503	-		LRK53_RS04885	0.82	-1.4
1,136,553	+		LRK53_RS04885	0.87	+0.5
1,136,554	-		LRK53_RS04885	0.87	-2.0
1,136,554	-		LRK53_RS04885	0.87	-0.3
1,136,683	+				+0.6
1,136,683	+				-0.0
1,136,683	+				-3.2
1,136,684	-				-0.7
1,136,684	-				+2.3
1,136,684	-				-0.4
1,136,684	-				-1.3
1,136,684	-				+1.0
1,136,684	-				-0.0
1,136,684	-				-1.6
1,136,684	-				+1.0
1,136,684	-				-0.0
1,136,684	-				+1.0
1,136,941	+		LRK53_RS04890	0.37	-2.0
1,136,941	+		LRK53_RS04890	0.37	-0.4
1,137,085	+		LRK53_RS04890	0.60	-0.4
1,137,085	+		LRK53_RS04890	0.60	-0.6
1,137,086	-		LRK53_RS04890	0.60	-1.4
1,137,086	-		LRK53_RS04890	0.60	-2.0
1,137,086	-		LRK53_RS04890	0.60	+0.2
1,137,086	-		LRK53_RS04890	0.60	-0.6
1,137,595	+		LRK53_RS04895	0.27	-1.6
1,137,595	+		LRK53_RS04895	0.27	-1.1
1,137,595	+		LRK53_RS04895	0.27	-0.5
1,137,595	+		LRK53_RS04895	0.27	-0.7
1,137,595	+		LRK53_RS04895	0.27	-0.4
1,137,595	+		LRK53_RS04895	0.27	-1.9
1,137,595	+		LRK53_RS04895	0.27	+0.3
1,137,596	-		LRK53_RS04895	0.27	-0.6
1,137,596	-		LRK53_RS04895	0.27	-0.0
1,137,977	+		LRK53_RS04895	0.68	-0.1
1,137,978	-		LRK53_RS04895	0.68	-0.9
1,138,057	+		LRK53_RS04895	0.76	-0.0
1,138,057	+		LRK53_RS04895	0.76	+1.0
1,138,057	+		LRK53_RS04895	0.76	-1.2
1,138,057	+		LRK53_RS04895	0.76	-1.1
1,138,057	+		LRK53_RS04895	0.76	+0.1
1,138,057	+		LRK53_RS04895	0.76	+1.0
1,138,057	+		LRK53_RS04895	0.76	-1.1
1,138,057	+		LRK53_RS04895	0.76	+0.4
1,138,058	-		LRK53_RS04895	0.76	-0.0
1,138,058	-		LRK53_RS04895	0.76	-0.6
1,138,058	-		LRK53_RS04895	0.76	-1.4
1,138,058	-		LRK53_RS04895	0.76	-0.2
1,138,058	-		LRK53_RS04895	0.76	-1.5
1,138,058	-		LRK53_RS04895	0.76	-1.0
1,138,058	-		LRK53_RS04895	0.76	-1.6
1,138,430	+				-0.6
1,138,430	+				-1.6
1,138,430	+				+0.4
1,138,430	+				-1.0
1,138,430	+				+1.0
1,138,430	+				-0.4
1,138,430	+				-0.6
1,138,430	+				-1.4
1,138,430	+				-0.6
1,138,431	-				+1.0
1,138,431	-				-2.9
1,138,431	-				-0.4
1,138,431	-				-2.2
1,138,431	-				-1.4
1,138,431	-				+1.2
1,138,431	-				-0.6
1,138,448	+				-1.7
1,138,514	+				-1.4
1,138,514	+				-0.6
1,138,515	-				-0.7
1,138,515	-				-0.4
1,138,515	-				-1.0
1,138,515	-				-0.0
1,138,515	-				+0.2
1,138,625	+		LRK53_RS04900	0.14	+1.0
1,138,626	-		LRK53_RS04900	0.14	+1.0
1,138,626	-		LRK53_RS04900	0.14	-1.1
1,138,628	+		LRK53_RS04900	0.15	-1.4
1,138,628	+		LRK53_RS04900	0.15	+1.0
1,138,628	+		LRK53_RS04900	0.15	+1.0
1,138,628	+		LRK53_RS04900	0.15	-0.6
1,138,628	+		LRK53_RS04900	0.15	-0.5
1,138,629	-		LRK53_RS04900	0.15	-0.0
1,138,629	-		LRK53_RS04900	0.15	-1.3
1,138,629	-		LRK53_RS04900	0.15	-0.0
1,138,629	-		LRK53_RS04900	0.15	-0.4
1,138,640	+		LRK53_RS04900	0.15	-1.4
1,138,640	+		LRK53_RS04900	0.15	-1.8
1,138,640	+		LRK53_RS04900	0.15	+1.0
1,138,640	+		LRK53_RS04900	0.15	-0.9
1,138,640	+		LRK53_RS04900	0.15	+1.0
1,138,640	+		LRK53_RS04900	0.15	-0.0
1,138,640	+		LRK53_RS04900	0.15	-0.6
1,138,641	-		LRK53_RS04900	0.15	-0.4
1,138,641	-		LRK53_RS04900	0.15	+1.0
1,138,641	-		LRK53_RS04900	0.15	-1.0
1,138,641	-		LRK53_RS04900	0.15	-0.0
1,138,641	-		LRK53_RS04900	0.15	-0.5
1,138,641	-		LRK53_RS04900	0.15	-1.4
1,138,641	-		LRK53_RS04900	0.15	-0.0
1,138,641	-		LRK53_RS04900	0.15	-0.7
1,138,884	-		LRK53_RS04900	0.27	+1.0
1,138,884	-		LRK53_RS04900	0.27	+1.0
1,138,884	-		LRK53_RS04900	0.27	-0.7
1,138,884	-		LRK53_RS04900	0.27	+1.6
1,139,019	-		LRK53_RS04900	0.33	+2.0
1,139,030	+		LRK53_RS04900	0.34	-1.5
1,139,031	-		LRK53_RS04900	0.34	-0.8
1,139,031	-		LRK53_RS04900	0.34	-0.4
1,139,031	-		LRK53_RS04900	0.34	-0.2
1,139,252	+		LRK53_RS04900	0.44	+1.0
1,139,252	+		LRK53_RS04900	0.44	+0.6
1,139,252	+		LRK53_RS04900	0.44	-0.0
1,139,252	+		LRK53_RS04900	0.44	+1.0
1,139,252	+		LRK53_RS04900	0.44	-0.0
1,139,252	+		LRK53_RS04900	0.44	+0.1
1,139,252	+		LRK53_RS04900	0.44	-0.0
1,139,252	+		LRK53_RS04900	0.44	-3.0
1,139,252	+		LRK53_RS04900	0.44	-0.6
1,139,252	+		LRK53_RS04900	0.44	-0.3
1,139,252	+		LRK53_RS04900	0.44	-0.9
1,139,252	+		LRK53_RS04900	0.44	+0.2
1,139,253	-		LRK53_RS04900	0.44	+0.4
1,139,253	-		LRK53_RS04900	0.44	+1.0
1,139,253	-		LRK53_RS04900	0.44	+0.0
1,139,253	-		LRK53_RS04900	0.44	-0.5
1,139,253	-		LRK53_RS04900	0.44	-0.4
1,139,253	-		LRK53_RS04900	0.44	-0.0
1,139,253	-		LRK53_RS04900	0.44	-2.0
1,139,253	-		LRK53_RS04900	0.44	-1.0
1,139,253	-		LRK53_RS04900	0.44	+1.0
1,139,253	-		LRK53_RS04900	0.44	-0.8
1,139,253	-		LRK53_RS04900	0.44	-1.0