Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15225

Experiment: pH5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH5
3,321,919	+		LRK53_RS15220	0.42	-1.3
3,321,919	+		LRK53_RS15220	0.42	-0.8
3,321,919	+		LRK53_RS15220	0.42	+1.0
3,321,919	+		LRK53_RS15220	0.42	-1.0
3,321,919	+		LRK53_RS15220	0.42	-0.6
3,321,919	+		LRK53_RS15220	0.42	-0.7
3,321,919	+		LRK53_RS15220	0.42	+1.6
3,321,919	+		LRK53_RS15220	0.42	+0.0
3,321,919	+		LRK53_RS15220	0.42	+1.0
3,321,920	-		LRK53_RS15220	0.42	+0.0
3,321,920	-		LRK53_RS15220	0.42	+0.2
3,321,920	-		LRK53_RS15220	0.42	+1.0
3,321,920	-		LRK53_RS15220	0.42	-1.8
3,321,920	-		LRK53_RS15220	0.42	+0.0
3,321,920	-		LRK53_RS15220	0.42	-0.8
3,321,964	+		LRK53_RS15220	0.44	+0.0
3,321,964	+		LRK53_RS15220	0.44	-1.9
3,321,964	+		LRK53_RS15220	0.44	-1.0
3,321,964	+		LRK53_RS15220	0.44	-0.4
3,321,964	+		LRK53_RS15220	0.44	+1.0
3,321,964	+		LRK53_RS15220	0.44	-0.8
3,321,964	+		LRK53_RS15220	0.44	-0.3
3,321,964	+		LRK53_RS15220	0.44	-0.9
3,321,964	+		LRK53_RS15220	0.44	+0.7
3,321,964	+		LRK53_RS15220	0.44	-1.6
3,321,964	+		LRK53_RS15220	0.44	-0.5
3,321,964	+		LRK53_RS15220	0.44	-1.9
3,321,964	+		LRK53_RS15220	0.44	+0.0
3,321,964	+		LRK53_RS15220	0.44	+0.0
3,321,965	-		LRK53_RS15220	0.44	+1.0
3,321,965	-		LRK53_RS15220	0.44	+1.0
3,321,965	-		LRK53_RS15220	0.44	+0.3
3,321,965	-		LRK53_RS15220	0.44	+1.6
3,321,965	-		LRK53_RS15220	0.44	-1.3
3,321,965	-		LRK53_RS15220	0.44	+0.0
3,321,965	-		LRK53_RS15220	0.44	+1.0
3,321,965	-		LRK53_RS15220	0.44	+0.0
3,321,965	-		LRK53_RS15220	0.44	-0.6
3,321,965	-		LRK53_RS15220	0.44	+0.4
3,321,965	-		LRK53_RS15220	0.44	+0.4
3,321,965	-		LRK53_RS15220	0.44	+1.6
3,321,965	-		LRK53_RS15220	0.44	-2.5
3,321,965	-		LRK53_RS15220	0.44	-0.2
3,321,965	-		LRK53_RS15220	0.44	-1.0
3,321,965	-		LRK53_RS15220	0.44	-0.3
3,321,965	-		LRK53_RS15220	0.44	-0.8
3,321,965	-		LRK53_RS15220	0.44	-1.6
3,321,965	-		LRK53_RS15220	0.44	-0.6
3,321,965	-		LRK53_RS15220	0.44	-1.2
3,321,965	-		LRK53_RS15220	0.44	-1.6
3,321,965	-		LRK53_RS15220	0.44	+1.0
3,322,078	+		LRK53_RS15220	0.51	-0.3
3,322,078	+		LRK53_RS15220	0.51	+0.0
3,322,079	-		LRK53_RS15220	0.51	+0.6
3,322,079	-		LRK53_RS15220	0.51	-1.4
3,322,079	-		LRK53_RS15220	0.51	+1.0
3,322,123	+		LRK53_RS15220	0.54	+1.0
3,322,123	+		LRK53_RS15220	0.54	-0.6
3,322,123	+		LRK53_RS15220	0.54	-0.4
3,322,123	+		LRK53_RS15220	0.54	-1.0
3,322,123	+		LRK53_RS15220	0.54	-2.2
3,322,123	+		LRK53_RS15220	0.54	-0.2
3,322,123	+		LRK53_RS15220	0.54	+0.0
3,322,124	-		LRK53_RS15220	0.54	+0.0
3,322,124	-		LRK53_RS15220	0.54	-0.6
3,322,124	-		LRK53_RS15220	0.54	+0.6
3,322,124	-		LRK53_RS15220	0.54	-0.6
3,322,124	-		LRK53_RS15220	0.54	+0.0
3,322,205	-		LRK53_RS15220	0.58	-0.8
3,322,205	-		LRK53_RS15220	0.58	-0.7
3,322,205	-		LRK53_RS15220	0.58	+0.0
3,322,306	+		LRK53_RS15220	0.64	-1.2
3,322,306	+		LRK53_RS15220	0.64	+0.0
3,322,306	+		LRK53_RS15220	0.64	-1.2
3,322,306	+		LRK53_RS15220	0.64	-2.5
3,322,306	+		LRK53_RS15220	0.64	-2.5
3,322,306	+		LRK53_RS15220	0.64	+0.7
3,322,306	+		LRK53_RS15220	0.64	-1.0
3,322,306	+		LRK53_RS15220	0.64	-0.9
3,322,306	+		LRK53_RS15220	0.64	+0.4
3,322,306	+		LRK53_RS15220	0.64	-2.7
3,322,306	+		LRK53_RS15220	0.64	-0.1
3,322,306	+		LRK53_RS15220	0.64	+1.3
3,322,307	-		LRK53_RS15220	0.64	+0.4
3,322,307	-		LRK53_RS15220	0.64	+1.0
3,322,307	-		LRK53_RS15220	0.64	-1.4
3,322,307	-		LRK53_RS15220	0.64	+0.7
3,322,307	-		LRK53_RS15220	0.64	+0.2
3,322,307	-		LRK53_RS15220	0.64	-0.5
3,322,307	-		LRK53_RS15220	0.64	-0.6
3,322,307	-		LRK53_RS15220	0.64	+0.0
3,322,307	-		LRK53_RS15220	0.64	-1.0
3,322,307	-		LRK53_RS15220	0.64	+1.0
3,322,552	+		LRK53_RS15220	0.78	-2.8
3,322,552	+		LRK53_RS15220	0.78	-0.6
3,322,552	+		LRK53_RS15220	0.78	-0.5
3,322,552	+		LRK53_RS15220	0.78	-0.9
3,322,552	+		LRK53_RS15220	0.78	-1.7
3,322,552	+		LRK53_RS15220	0.78	-1.2
3,322,552	+		LRK53_RS15220	0.78	-0.2
3,322,552	+		LRK53_RS15220	0.78	-2.6
3,322,552	+		LRK53_RS15220	0.78	-0.8
3,322,552	+		LRK53_RS15220	0.78	-0.4
3,322,552	+		LRK53_RS15220	0.78	+1.0
3,322,553	-		LRK53_RS15220	0.79	-1.1
3,322,553	-		LRK53_RS15220	0.79	-1.5
3,322,553	-		LRK53_RS15220	0.79	+1.0
3,322,553	-		LRK53_RS15220	0.79	+0.4
3,322,553	-		LRK53_RS15220	0.79	-1.3
3,322,553	-		LRK53_RS15220	0.79	+0.4
3,322,553	-		LRK53_RS15220	0.79	-0.1
3,322,553	-		LRK53_RS15220	0.79	-0.9
3,322,553	-		LRK53_RS15220	0.79	-0.6
3,322,553	-		LRK53_RS15220	0.79	-0.2
3,322,553	-		LRK53_RS15220	0.79	-0.6
3,322,553	-		LRK53_RS15220	0.79	+1.0
3,322,553	-		LRK53_RS15220	0.79	-0.8
3,322,952	+		LRK53_RS15225	0.13	-0.8
3,322,953	+		LRK53_RS15225	0.13	-2.2
3,322,953	+		LRK53_RS15225	0.13	-1.6
3,322,953	+		LRK53_RS15225	0.13	-1.2
3,322,953	+		LRK53_RS15225	0.13	-1.0
3,322,954	-		LRK53_RS15225	0.13	-0.6
3,322,954	-		LRK53_RS15225	0.13	+0.4
3,322,954	-		LRK53_RS15225	0.13	-1.6
3,322,954	-		LRK53_RS15225	0.13	+0.4
3,322,954	-		LRK53_RS15225	0.13	-0.2
3,322,954	-		LRK53_RS15225	0.13	-1.1
3,322,954	-		LRK53_RS15225	0.13	-0.6
3,322,954	-		LRK53_RS15225	0.13	-1.0
3,322,954	-		LRK53_RS15225	0.13	-0.5
3,322,954	-		LRK53_RS15225	0.13	-1.2
3,322,954	-		LRK53_RS15225	0.13	-0.6
3,323,021	+		LRK53_RS15225	0.39	+0.0
3,323,088	+		LRK53_RS15225	0.65	-1.0
3,323,088	+		LRK53_RS15225	0.65	+0.0
3,323,088	+		LRK53_RS15225	0.65	+1.0
3,323,088	+		LRK53_RS15225	0.65	-0.6
3,323,088	+		LRK53_RS15225	0.65	-1.5
3,323,088	+		LRK53_RS15225	0.65	-1.0
3,323,089	-		LRK53_RS15225	0.65	+0.0
3,323,089	-		LRK53_RS15225	0.65	-1.6
3,323,089	-		LRK53_RS15225	0.65	-1.4
3,323,089	-		LRK53_RS15225	0.65	-0.6
3,323,089	-		LRK53_RS15225	0.65	-0.6
3,323,089	-		LRK53_RS15225	0.65	-0.7
3,323,089	-		LRK53_RS15225	0.65	-2.9
3,323,089	-		LRK53_RS15225	0.65	+2.0
3,323,089	-		LRK53_RS15225	0.65	-0.2
3,323,273	+				-1.3
3,323,273	+				-2.0
3,323,273	+				-0.2
3,323,273	+				+1.0
3,323,273	+				-0.4
3,323,273	+				-0.6
3,323,273	+				-1.1
3,323,273	+				-1.0
3,323,273	+				-1.3
3,323,273	+				+0.1
3,323,273	+				+0.0
3,323,273	+				-1.0
3,323,273	+				+0.4
3,323,273	+				-0.3
3,323,273	+				-1.0
3,323,273	+				-0.8
3,323,273	+				+2.6
3,323,273	+				-1.0
3,323,273	+				+1.6
3,323,273	+				-1.0
3,323,273	+				-0.8
3,323,273	+				-0.6
3,323,273	+				+1.0
3,323,273	+				-0.6
3,323,273	+				-1.8
3,323,273	+				-1.0
3,323,273	+				+0.0
3,323,273	+				+0.0
3,323,273	+				-0.6
3,323,273	+				-1.7
3,323,273	+				+1.0
3,323,273	+				-0.6
3,323,273	+				+1.0
3,323,273	+				-0.3
3,323,273	+				+0.0
3,323,273	+				+0.0
3,323,273	+				-1.7
3,323,273	+				-1.8
3,323,273	+				-0.3
3,323,273	+				-1.6
3,323,274	-				-0.6
3,323,274	-				-0.6
3,323,274	-				+0.0
3,323,274	-				-0.8
3,323,274	-				-1.8
3,323,274	-				-1.7
3,323,274	-				-0.7
3,323,274	-				-0.3
3,323,274	-				-0.2
3,323,274	-				-0.6
3,323,274	-				-1.1
3,323,274	-				-1.6
3,323,274	-				-1.3
3,323,274	-				+0.0
3,323,274	-				-0.6
3,323,274	-				-1.0
3,323,274	-				-0.3
3,323,274	-				-0.1
3,323,274	-				+0.0
3,323,274	-				-1.8
3,323,274	-				-1.0
3,323,274	-				-0.6
3,323,274	-				-0.6
3,323,274	-				-0.5
3,323,274	-				-0.6
3,323,274	-				-0.2
3,323,274	-				-2.0
3,323,274	-				+0.0
3,323,274	-				-0.7
3,323,274	-				+0.0
3,323,274	-				-2.7
3,323,274	-				-0.8
3,323,274	-				-1.8
3,323,274	-				-1.6
3,323,274	-				-1.8
3,323,274	-				-1.3
3,323,274	-				+1.0
3,323,274	-				-1.0
3,323,274	-				-0.6
3,323,274	-				-0.8
3,323,274	-				+0.0
3,323,558	+		LRK53_RS15230	0.57	+0.4
3,323,558	+		LRK53_RS15230	0.57	+1.0
3,323,558	+		LRK53_RS15230	0.57	-0.8
3,323,558	+		LRK53_RS15230	0.57	-1.0
3,323,559	-		LRK53_RS15230	0.57	-1.3
3,323,559	-		LRK53_RS15230	0.57	+1.0
3,323,559	-		LRK53_RS15230	0.57	-0.5
3,323,559	-		LRK53_RS15230	0.57	-1.6
3,323,559	-		LRK53_RS15230	0.57	+0.0
3,323,618	+		LRK53_RS15230	0.69	-0.7
3,323,618	+		LRK53_RS15230	0.69	-1.8
3,323,618	+		LRK53_RS15230	0.69	-1.0
3,323,618	+		LRK53_RS15230	0.69	-0.5
3,323,618	+		LRK53_RS15230	0.69	+0.0
3,323,618	+		LRK53_RS15230	0.69	-0.9
3,323,618	+		LRK53_RS15230	0.69	-0.3
3,323,618	+		LRK53_RS15230	0.69	-1.0
3,323,619	-		LRK53_RS15230	0.69	+0.0
3,323,619	-		LRK53_RS15230	0.69	-1.5
3,323,619	-		LRK53_RS15230	0.69	-0.6
3,323,619	-		LRK53_RS15230	0.69	-0.4
3,323,619	-		LRK53_RS15230	0.69	-0.5
3,323,619	-		LRK53_RS15230	0.69	-1.2
3,323,619	-		LRK53_RS15230	0.69	-0.7
3,323,619	-		LRK53_RS15230	0.69	-0.3
3,323,619	-		LRK53_RS15230	0.69	-0.7
3,323,619	-		LRK53_RS15230	0.69	-1.0
3,323,619	-		LRK53_RS15230	0.69	-1.0
3,323,769	+				-1.6
3,323,769	+				+0.6
3,323,769	+				-0.7
3,323,769	+				-1.6
3,323,769	+				-0.3
3,323,769	+				-1.2
3,323,769	+				-0.4
3,323,769	+				+2.0
3,323,769	+				-0.4
3,323,769	+				-0.8
3,323,769	+				-1.0
3,323,769	+				+0.5
3,323,769	+				+1.0
3,323,769	+				-0.2
3,323,769	+				-1.5
3,323,769	+				-0.4
3,323,769	+				-0.3
3,323,769	+				+2.0
3,323,769	+				-0.3
3,323,769	+				-0.6
3,323,769	+				-0.2
3,323,769	+				+0.7
3,323,769	+				-1.3
3,323,769	+				-1.2
3,323,769	+				+1.7
3,323,769	+				-0.7
3,323,769	+				-0.5
3,323,769	+				-0.6
3,323,769	+				-1.0
3,323,769	+				-0.6
3,323,769	+				+0.0
3,323,769	+				+0.6
3,323,769	+				-1.8
3,323,769	+				-1.0
3,323,769	+				-0.9
3,323,770	-				+0.6
3,323,770	-				-0.9
3,323,770	-				-3.2
3,323,770	-				+0.0
3,323,770	-				-1.3
3,323,770	-				-2.0
3,323,770	-				-1.3
3,323,770	-				-0.6
3,323,770	-				-0.8
3,323,770	-				+0.2
3,323,770	-				-1.0
3,323,770	-				+0.0
3,323,770	-				-0.4
3,323,770	-				-1.4
3,323,770	-				-1.0
3,323,770	-				-1.4
3,323,770	-				-1.2
3,323,770	-				-1.0
3,323,770	-				+1.6
3,323,770	-				-1.1
3,323,770	-				-0.6
3,323,770	-				+0.6
3,323,770	-				-0.8
3,323,770	-				+1.0
3,323,770	-				+0.0
3,323,770	-				-1.5
3,323,770	-				-1.2
3,323,770	-				+1.0
3,323,770	-				-1.5
3,323,770	-				-1.6
3,323,770	-				-0.5
3,323,770	-				-1.2
3,323,770	-				-0.5
3,323,770	-				+0.3
3,323,770	-				-1.1
3,323,770	-				+0.0
3,323,770	-				-1.5
3,323,853	-		LRK53_RS15235	0.15	+1.0