Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13150

Experiment: pH5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH5
2,898,356	-				-1.5
2,898,405	-				-1.4
2,898,436	+				-0.1
2,898,436	+				-0.1
2,898,437	-				-0.1
2,898,472	+		LRK53_RS13145	0.11	-2.6
2,898,473	-		LRK53_RS13145	0.11	-0.3
2,898,473	-		LRK53_RS13145	0.11	-0.8
2,898,575	+		LRK53_RS13145	0.29	-1.8
2,898,575	+		LRK53_RS13145	0.29	-1.4
2,898,575	+		LRK53_RS13145	0.29	+0.7
2,898,575	+		LRK53_RS13145	0.29	-0.5
2,898,576	-		LRK53_RS13145	0.29	+0.9
2,898,576	-		LRK53_RS13145	0.29	-1.4
2,898,576	-		LRK53_RS13145	0.29	-1.6
2,898,576	-		LRK53_RS13145	0.29	-0.9
2,898,576	-		LRK53_RS13145	0.29	-0.1
2,898,669	-		LRK53_RS13145	0.46	-0.5
2,898,700	-		LRK53_RS13145	0.51	-0.1
2,898,739	+		LRK53_RS13145	0.58	+1.2
2,898,739	+		LRK53_RS13145	0.58	-0.1
2,898,739	+		LRK53_RS13145	0.58	-0.7
2,898,740	-		LRK53_RS13145	0.58	-0.1
2,898,740	-		LRK53_RS13145	0.58	+0.4
2,898,740	-		LRK53_RS13145	0.58	-1.2
2,898,740	-		LRK53_RS13145	0.58	-1.2
2,898,740	-		LRK53_RS13145	0.58	+1.5
2,898,740	-		LRK53_RS13145	0.58	-1.6
2,898,794	+		LRK53_RS13145	0.68	-0.9
2,898,807	+		LRK53_RS13145	0.70	-0.9
2,898,807	+		LRK53_RS13145	0.70	-0.2
2,898,808	-		LRK53_RS13145	0.70	-0.3
2,898,860	+		LRK53_RS13145	0.79	-1.4
2,898,860	+		LRK53_RS13145	0.79	-0.8
2,898,861	-		LRK53_RS13145	0.80	+0.5
2,898,861	-		LRK53_RS13145	0.80	-1.4
2,898,874	-		LRK53_RS13145	0.82	-1.4
2,898,906	+		LRK53_RS13145	0.87	-0.3
2,898,906	+		LRK53_RS13145	0.87	+0.4
2,898,906	+		LRK53_RS13145	0.87	-1.1
2,898,906	+		LRK53_RS13145	0.87	-1.6
2,898,907	-		LRK53_RS13145	0.88	-0.9
2,898,957	+				+0.0
2,898,957	+				+0.7
2,898,957	+				-1.5
2,898,957	+				-0.1
2,898,957	+				-0.4
2,898,957	+				-0.6
2,898,958	-				-1.4
2,898,958	-				+1.9
2,898,958	-				-0.1
2,898,993	+				-1.4
2,898,993	+				-0.6
2,898,993	+				-1.9
2,898,993	+				-1.6
2,898,993	+				+0.5
2,898,993	+				-0.3
2,898,993	+				-0.7
2,898,993	+				-0.1
2,898,993	+				+0.9
2,898,994	-				+0.9
2,898,994	-				-0.3
2,898,994	-				-0.6
2,898,994	-				-0.9
2,898,994	-				-0.6
2,898,996	+				+0.4
2,898,996	+				-1.3
2,898,997	-				-0.9
2,898,997	-				-1.6
2,898,997	-				+0.2
2,899,026	+				-0.6
2,899,026	+				-0.6
2,899,026	+				-1.1
2,899,026	+				-1.4
2,899,026	+				-1.1
2,899,026	+				+0.9
2,899,027	-				-1.4
2,899,027	-				-0.1
2,899,027	-				+0.5
2,899,027	-				+1.4
2,899,027	-				-1.4
2,899,027	-				-1.4
2,899,027	-				-2.2
2,899,112	-				-0.6
2,899,117	+				-0.3
2,899,118	-				-1.1
2,899,147	+				-1.5
2,899,147	+				-0.4
2,899,147	+				-1.1
2,899,147	+				-1.6
2,899,147	+				-1.4
2,899,147	+				+2.2
2,899,147	+				-1.2
2,899,147	+				-2.0
2,899,147	+				-2.6
2,899,147	+				-0.5
2,899,148	-				-1.2
2,899,148	-				-0.9
2,899,148	-				-2.5
2,899,148	-				+0.2
2,899,148	-				+0.9
2,899,148	-				-0.1
2,899,148	-				-1.1
2,899,148	-				-1.3
2,899,148	-				-2.1
2,899,148	-				-0.6
2,899,154	+				-0.1
2,899,154	+				-0.3
2,899,154	+				-0.9
2,899,154	+				-0.1
2,899,154	+				-0.1
2,899,154	+				-0.1
2,899,154	+				-1.9
2,899,154	+				-1.9
2,899,154	+				-1.1
2,899,154	+				-1.9
2,899,154	+				+0.5
2,899,154	+				-0.1
2,899,155	-				+1.9
2,899,155	-				-0.7
2,899,155	-				-0.6
2,899,155	-				-1.2
2,899,176	+				-1.1
2,899,177	-				+0.9
2,899,222	-				-0.8
2,899,291	+				-1.1
2,899,291	+				+0.1
2,899,291	+				-0.7
2,899,343	-				+0.9
2,899,873	+		LRK53_RS13150	0.50	+0.9
2,899,873	+		LRK53_RS13150	0.50	-1.4
2,899,873	+		LRK53_RS13150	0.50	-1.0
2,899,873	+		LRK53_RS13150	0.50	-0.4
2,899,873	+		LRK53_RS13150	0.50	-1.6
2,899,873	+		LRK53_RS13150	0.50	-0.1
2,899,873	+		LRK53_RS13150	0.50	+1.9
2,899,873	+		LRK53_RS13150	0.50	-0.1
2,899,873	+		LRK53_RS13150	0.50	-0.4
2,899,873	+		LRK53_RS13150	0.50	+0.4
2,899,873	+		LRK53_RS13150	0.50	-2.1
2,899,873	+		LRK53_RS13150	0.50	-0.1
2,899,874	-		LRK53_RS13150	0.51	-0.9
2,899,874	-		LRK53_RS13150	0.51	-0.1
2,899,874	-		LRK53_RS13150	0.51	-1.7
2,899,954	+		LRK53_RS13150	0.57	-0.6
2,899,954	+		LRK53_RS13150	0.57	+2.5
2,899,954	+		LRK53_RS13150	0.57	-1.0
2,899,954	+		LRK53_RS13150	0.57	-0.6
2,899,954	+		LRK53_RS13150	0.57	-1.1
2,899,954	+		LRK53_RS13150	0.57	-1.6
2,899,954	+		LRK53_RS13150	0.57	-2.2
2,899,954	+		LRK53_RS13150	0.57	-0.6
2,899,954	+		LRK53_RS13150	0.57	-0.3
2,899,955	-		LRK53_RS13150	0.58	-1.4
2,899,955	-		LRK53_RS13150	0.58	-0.6
2,900,068	+		LRK53_RS13150	0.67	-0.6
2,900,068	+		LRK53_RS13150	0.67	-3.0
2,900,116	+		LRK53_RS13150	0.72	-1.0
2,900,116	+		LRK53_RS13150	0.72	-1.2
2,900,116	+		LRK53_RS13150	0.72	-0.6
2,900,116	+		LRK53_RS13150	0.72	-1.4
2,900,116	+		LRK53_RS13150	0.72	-0.2
2,900,116	+		LRK53_RS13150	0.72	-1.1
2,900,116	+		LRK53_RS13150	0.72	-2.1
2,900,116	+		LRK53_RS13150	0.72	-0.6
2,900,116	+		LRK53_RS13150	0.72	-1.6
2,900,116	+		LRK53_RS13150	0.72	-1.6
2,900,116	+		LRK53_RS13150	0.72	-0.6
2,900,116	+		LRK53_RS13150	0.72	-2.4
2,900,117	-		LRK53_RS13150	0.72	-1.9
2,900,117	-		LRK53_RS13150	0.72	-1.4
2,900,117	-		LRK53_RS13150	0.72	-0.1
2,900,117	-		LRK53_RS13150	0.72	-0.6
2,900,117	-		LRK53_RS13150	0.72	-0.6
2,900,117	-		LRK53_RS13150	0.72	-0.1
2,900,117	-		LRK53_RS13150	0.72	+0.9
2,900,117	-		LRK53_RS13150	0.72	-0.4
2,900,117	-		LRK53_RS13150	0.72	-0.2
2,900,117	-		LRK53_RS13150	0.72	-1.6
2,900,117	-		LRK53_RS13150	0.72	+0.9
2,900,117	-		LRK53_RS13150	0.72	-0.5
2,900,117	-		LRK53_RS13150	0.72	-0.4
2,900,383	-				-0.7
2,900,383	-				+0.2
2,900,426	+				-0.6
2,900,456	+				-0.5
2,900,456	+				+0.4
2,900,456	+				-0.1
2,900,536	+				-1.1
2,900,536	+				-0.4
2,900,536	+				-0.9
2,900,536	+				-1.5
2,900,536	+				-1.5
2,900,536	+				-0.6
2,900,536	+				-2.6
2,900,536	+				-0.6
2,900,536	+				-1.1
2,900,536	+				-1.9
2,900,536	+				-0.6
2,900,536	+				-0.5
2,900,536	+				-0.1
2,900,536	+				-0.8
2,900,536	+				-1.1
2,900,537	-				+0.4
2,900,537	-				-0.4
2,900,537	-				-1.1
2,900,537	-				+2.5
2,900,568	+				-1.2
2,900,611	+				-0.1
2,900,611	+				+0.4
2,900,612	-				+1.9
2,900,612	-				-0.7
2,900,612	-				-1.2
2,900,612	-				-1.1
2,900,612	-				-0.8
2,900,612	-				+0.4
2,900,690	+				-0.8
2,900,690	+				+0.4
2,900,690	+				+2.9
2,900,690	+				-1.4
2,900,690	+				-1.1
2,900,690	+				-0.1
2,900,690	+				-0.3
2,900,691	-				+0.9
2,900,691	-				+0.9
2,900,691	-				+0.9
2,900,691	-				-0.6
2,900,691	-				-1.4
2,900,691	-				-0.1
2,900,691	-				-2.2
2,900,691	-				-2.1
2,900,691	-				+0.6
2,900,691	-				+1.4
2,900,692	+				+0.9
2,900,692	+				+1.9
2,900,692	+				-0.6
2,900,692	+				-0.7
2,900,692	+				-1.4
2,900,692	+				+0.1
2,900,692	+				-1.9
2,900,692	+				-1.6
2,900,692	+				-1.3
2,900,692	+				+0.1
2,900,692	+				+0.9
2,900,692	+				-0.1
2,900,692	+				-1.6
2,900,692	+				-0.6
2,900,692	+				+0.9
2,900,692	+				-1.6
2,900,692	+				-2.4
2,900,692	+				+1.5
2,900,692	+				+1.9
2,900,693	-				+0.5
2,900,693	-				-2.4
2,900,693	-				-1.1
2,900,693	-				-0.1
2,900,693	-				-0.3
2,900,693	-				-0.1
2,900,693	-				-0.7
2,900,693	-				-1.4
2,900,693	-				-0.4
2,900,693	-				-0.4
2,900,693	-				-0.5
2,900,693	-				-2.5
2,900,693	-				-1.1
2,900,693	-				-1.1
2,901,127	+				-1.1
2,901,127	+				-0.7
2,901,128	-				-1.1
2,901,128	-				-0.6
2,901,139	+				+0.4
2,901,140	-				-0.8
2,901,141	+				-0.8
2,901,142	-				+1.5
2,901,142	-				-0.5
2,901,142	-				-0.6
2,901,213	+				-1.9
2,901,213	+				+0.9
2,901,213	+				-0.9
2,901,213	+				+0.4
2,901,213	+				-1.2
2,901,213	+				+0.9
2,901,214	-				+0.4
2,901,214	-				-0.6
2,901,341	+		LRK53_RS13160	0.12	-1.1
2,901,341	+		LRK53_RS13160	0.12	-0.9
2,901,341	+		LRK53_RS13160	0.12	-0.1
2,901,342	-		LRK53_RS13160	0.12	+0.1
2,901,342	-		LRK53_RS13160	0.12	-2.4
2,901,342	-		LRK53_RS13160	0.12	+0.7
2,901,426	+		LRK53_RS13160	0.19	-1.1
2,901,426	+		LRK53_RS13160	0.19	-0.5
2,901,426	+		LRK53_RS13160	0.19	-0.7
2,901,426	+		LRK53_RS13160	0.19	-0.4
2,901,426	+		LRK53_RS13160	0.19	-1.1
2,901,426	+		LRK53_RS13160	0.19	+1.9
2,901,426	+		LRK53_RS13160	0.19	+0.4
2,901,426	+		LRK53_RS13160	0.19	-0.1
2,901,426	+		LRK53_RS13160	0.19	-0.4
2,901,427	-		LRK53_RS13160	0.19	-0.5
2,901,427	-		LRK53_RS13160	0.19	-0.1
2,901,427	-		LRK53_RS13160	0.19	+0.9
2,901,427	-		LRK53_RS13160	0.19	-0.6
2,901,427	-		LRK53_RS13160	0.19	+0.4
2,901,427	-		LRK53_RS13160	0.19	-1.1
2,901,427	-		LRK53_RS13160	0.19	+0.9
2,901,427	-		LRK53_RS13160	0.19	-2.9
2,901,427	-		LRK53_RS13160	0.19	-0.5
2,901,427	-		LRK53_RS13160	0.19	+0.9