Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08085

Experiment: pH5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH5
1,813,333	+		LRK53_RS08080	0.24	+0.4
1,813,333	+		LRK53_RS08080	0.24	-2.1
1,813,333	+		LRK53_RS08080	0.24	+0.5
1,813,334	-		LRK53_RS08080	0.24	-1.1
1,813,349	+		LRK53_RS08080	0.25	-0.1
1,813,349	+		LRK53_RS08080	0.25	-0.5
1,813,349	+		LRK53_RS08080	0.25	-0.9
1,813,349	+		LRK53_RS08080	0.25	-2.1
1,813,349	+		LRK53_RS08080	0.25	-0.1
1,813,349	+		LRK53_RS08080	0.25	-0.9
1,813,349	+		LRK53_RS08080	0.25	+0.9
1,813,349	+		LRK53_RS08080	0.25	-0.7
1,813,349	+		LRK53_RS08080	0.25	-2.6
1,813,350	-		LRK53_RS08080	0.25	+2.5
1,813,350	-		LRK53_RS08080	0.25	+0.3
1,813,350	-		LRK53_RS08080	0.25	-0.6
1,813,350	-		LRK53_RS08080	0.25	+0.5
1,813,350	-		LRK53_RS08080	0.25	-0.6
1,813,350	-		LRK53_RS08080	0.25	-1.9
1,813,350	-		LRK53_RS08080	0.25	-1.1
1,813,477	+		LRK53_RS08080	0.35	+0.6
1,813,477	+		LRK53_RS08080	0.35	-0.7
1,813,477	+		LRK53_RS08080	0.35	-0.9
1,813,477	+		LRK53_RS08080	0.35	-0.1
1,813,477	+		LRK53_RS08080	0.35	-1.6
1,813,477	+		LRK53_RS08080	0.35	+0.5
1,813,478	-		LRK53_RS08080	0.35	-1.1
1,813,478	-		LRK53_RS08080	0.35	-0.2
1,813,478	-		LRK53_RS08080	0.35	-0.8
1,813,478	-		LRK53_RS08080	0.35	-1.9
1,813,478	-		LRK53_RS08080	0.35	-0.4
1,813,478	-		LRK53_RS08080	0.35	+0.6
1,813,688	-		LRK53_RS08080	0.52	+0.3
1,813,878	+		LRK53_RS08080	0.67	-1.1
1,813,879	-		LRK53_RS08080	0.67	-1.6
1,813,879	-		LRK53_RS08080	0.67	-0.1
1,814,098	-		LRK53_RS08080	0.84	-1.3
1,814,223	+				-0.8
1,814,223	+				-1.2
1,814,223	+				-1.5
1,814,223	+				-0.7
1,814,223	+				+0.9
1,814,223	+				-0.9
1,814,223	+				-0.8
1,814,223	+				+0.7
1,814,224	-				-0.7
1,814,224	-				-1.9
1,814,224	-				-1.1
1,814,224	-				-1.1
1,814,271	+				-0.1
1,814,271	+				-2.6
1,814,271	+				+1.5
1,814,271	+				-0.7
1,814,272	-				-0.1
1,814,272	-				-1.9
1,814,272	-				-1.0
1,814,272	-				-1.1
1,814,272	-				-2.1
1,814,272	-				+0.9
1,814,272	-				-0.7
1,814,275	+				-1.7
1,814,275	+				-0.1
1,814,275	+				-0.6
1,814,275	+				-0.9
1,814,275	+				-0.4
1,814,275	+				-1.2
1,814,275	+				+0.9
1,814,275	+				-1.4
1,814,275	+				-0.4
1,814,275	+				-1.1
1,814,275	+				-1.1
1,814,275	+				-0.5
1,814,275	+				-0.1
1,814,275	+				-0.8
1,814,275	+				-0.1
1,814,275	+				-1.4
1,814,275	+				-0.4
1,814,275	+				-0.1
1,814,275	+				-0.1
1,814,275	+				+0.3
1,814,275	+				-2.6
1,814,275	+				-1.1
1,814,275	+				-0.1
1,814,275	+				+0.3
1,814,275	+				-0.1
1,814,275	+				-1.1
1,814,275	+				-1.4
1,814,275	+				+0.9
1,814,275	+				+0.9
1,814,275	+				-0.1
1,814,275	+				-0.7
1,814,275	+				-0.7
1,814,276	-				+0.1
1,814,276	-				-1.9
1,814,276	-				-1.4
1,814,276	-				-0.7
1,814,276	-				-0.1
1,814,276	-				-1.4
1,814,276	-				-0.9
1,814,276	-				+0.9
1,814,276	-				+0.9
1,814,276	-				-1.1
1,814,276	-				-0.1
1,814,276	-				+0.3
1,814,276	-				-0.9
1,814,276	-				-1.2
1,814,276	-				-1.4
1,814,276	-				+0.9
1,814,276	-				-0.6
1,814,276	-				-1.1
1,814,276	-				-2.6
1,814,276	-				-1.2
1,814,276	-				-1.1
1,814,276	-				-0.8
1,814,343	+				-0.1
1,814,344	-				-0.9
1,814,344	-				+0.9
1,814,360	+				+0.4
1,814,360	+				+1.9
1,814,361	-				-1.4
1,814,447	+		LRK53_RS08085	0.11	+2.5
1,814,447	+		LRK53_RS08085	0.11	+0.4
1,814,447	+		LRK53_RS08085	0.11	-0.2
1,814,448	-		LRK53_RS08085	0.11	-0.7
1,814,448	-		LRK53_RS08085	0.11	-1.7
1,814,448	-		LRK53_RS08085	0.11	+0.6
1,814,453	+		LRK53_RS08085	0.12	-0.6
1,814,453	+		LRK53_RS08085	0.12	+0.3
1,814,453	+		LRK53_RS08085	0.12	+2.5
1,814,453	+		LRK53_RS08085	0.12	-1.4
1,814,453	+		LRK53_RS08085	0.12	+0.9
1,814,453	+		LRK53_RS08085	0.12	-1.3
1,814,454	-		LRK53_RS08085	0.12	+0.2
1,814,454	-		LRK53_RS08085	0.12	-0.7
1,814,454	-		LRK53_RS08085	0.12	-2.1
1,814,528	+		LRK53_RS08085	0.17	-0.7
1,814,528	+		LRK53_RS08085	0.17	-0.1
1,814,528	+		LRK53_RS08085	0.17	-1.3
1,814,528	+		LRK53_RS08085	0.17	+0.9
1,814,529	-		LRK53_RS08085	0.18	-0.7
1,814,529	-		LRK53_RS08085	0.18	-0.9
1,814,529	-		LRK53_RS08085	0.18	+0.9
1,814,529	-		LRK53_RS08085	0.18	-0.7
1,814,559	+		LRK53_RS08085	0.20	-1.1
1,814,559	+		LRK53_RS08085	0.20	-0.4
1,814,560	-		LRK53_RS08085	0.20	-0.1
1,814,560	-		LRK53_RS08085	0.20	-0.1
1,814,575	+		LRK53_RS08085	0.21	-0.1
1,814,575	+		LRK53_RS08085	0.21	-2.7
1,814,575	+		LRK53_RS08085	0.21	-1.6
1,814,575	+		LRK53_RS08085	0.21	+0.9
1,814,575	+		LRK53_RS08085	0.21	-1.3
1,814,575	+		LRK53_RS08085	0.21	-0.7
1,814,576	-		LRK53_RS08085	0.21	-0.1
1,814,576	-		LRK53_RS08085	0.21	+1.9
1,814,576	-		LRK53_RS08085	0.21	-0.8
1,814,576	-		LRK53_RS08085	0.21	-1.1
1,814,576	-		LRK53_RS08085	0.21	-0.1
1,814,602	+		LRK53_RS08085	0.23	+1.9
1,814,602	+		LRK53_RS08085	0.23	+0.3
1,814,603	-		LRK53_RS08085	0.23	-1.9
1,814,603	-		LRK53_RS08085	0.23	+0.3
1,814,629	+		LRK53_RS08085	0.25	-0.6
1,814,629	+		LRK53_RS08085	0.25	-0.5
1,814,630	-		LRK53_RS08085	0.25	-0.4
1,814,638	-		LRK53_RS08085	0.26	-0.7
1,814,736	-		LRK53_RS08085	0.33	+0.9
1,814,737	+		LRK53_RS08085	0.33	+0.1
1,814,737	+		LRK53_RS08085	0.33	-0.8
1,814,737	+		LRK53_RS08085	0.33	+0.1
1,814,737	+		LRK53_RS08085	0.33	-0.4
1,814,738	-		LRK53_RS08085	0.33	-2.4
1,814,738	-		LRK53_RS08085	0.33	+0.3
1,814,738	-		LRK53_RS08085	0.33	-2.6
1,814,738	-		LRK53_RS08085	0.33	-0.1
1,814,738	-		LRK53_RS08085	0.33	-0.1
1,814,738	-		LRK53_RS08085	0.33	-0.1
1,814,807	+		LRK53_RS08085	0.39	-0.5
1,814,807	+		LRK53_RS08085	0.39	-0.1
1,814,807	+		LRK53_RS08085	0.39	-0.8
1,814,808	-		LRK53_RS08085	0.39	-0.4
1,814,982	+		LRK53_RS08085	0.52	+0.6
1,814,982	+		LRK53_RS08085	0.52	-1.9
1,814,982	+		LRK53_RS08085	0.52	-1.6
1,814,982	+		LRK53_RS08085	0.52	-1.4
1,814,983	-		LRK53_RS08085	0.52	+0.9
1,814,983	-		LRK53_RS08085	0.52	-1.9
1,814,983	-		LRK53_RS08085	0.52	-1.3
1,814,983	-		LRK53_RS08085	0.52	-1.1
1,815,091	+		LRK53_RS08085	0.60	-1.9
1,815,091	+		LRK53_RS08085	0.60	+0.4
1,815,092	-		LRK53_RS08085	0.60	+0.9
1,815,092	-		LRK53_RS08085	0.60	+0.9
1,815,097	+		LRK53_RS08085	0.61	-1.6
1,815,097	+		LRK53_RS08085	0.61	-0.1
1,815,097	+		LRK53_RS08085	0.61	+1.5
1,815,098	-		LRK53_RS08085	0.61	-0.1
1,815,571	+				-0.1
1,815,571	+				-0.7
1,815,571	+				-0.3
1,815,571	+				-0.9
1,815,571	+				-0.5
1,815,572	-				+0.9
1,815,572	-				-1.1
1,815,572	-				-0.1
1,815,572	-				+1.9
1,815,659	+				+0.9
1,815,659	+				-1.1
1,815,659	+				-2.4
1,815,659	+				-0.1
1,815,660	-				-0.4
1,815,812	-				-0.4
1,815,812	-				-1.4
1,815,812	-				-0.4
1,815,865	+				-0.7
1,815,865	+				+0.4
1,815,866	-				+0.9
1,815,886	+				-1.2
1,815,886	+				-1.5
1,815,886	+				-0.7
1,815,886	+				-0.7
1,815,886	+				+0.5
1,815,886	+				-2.3
1,815,886	+				-1.1
1,815,886	+				+0.9
1,815,887	-				-1.3
1,815,887	-				-1.1
1,815,887	-				-0.3
1,815,887	-				+0.3
1,815,887	-				+0.5
1,815,887	-				-0.6
1,815,887	-				+0.3
1,815,887	-				-1.9
1,815,887	-				-0.1
1,815,887	-				-0.7
1,815,892	+				-1.1
1,815,892	+				+0.9
1,815,892	+				-0.1
1,815,892	+				-0.9
1,815,892	+				+0.2
1,815,892	+				+0.4
1,815,892	+				-1.2
1,815,892	+				+1.5
1,815,892	+				-1.9
1,815,893	-				-0.3
1,815,893	-				-1.0
1,815,893	-				-1.3
1,815,893	-				+0.2
1,815,893	-				+0.4
1,815,893	-				-0.1
1,815,893	-				-0.9
1,815,893	-				-0.7
1,815,893	-				+1.9
1,815,893	-				-0.9
1,815,893	-				+1.5
1,815,893	-				-0.7
1,815,893	-				+0.9
1,815,893	-				-1.9
1,815,893	-				-1.7
1,815,893	-				-0.9
1,815,893	-				-1.5
1,815,893	-				+0.3
1,815,922	+				-1.4
1,815,922	+				-0.9
1,815,922	+				-1.1
1,815,923	-				+0.6
1,815,923	-				-0.1
1,815,923	-				+0.1
1,815,949	+		LRK53_RS08090	0.11	-0.3
1,815,949	+		LRK53_RS08090	0.11	-1.1
1,815,949	+		LRK53_RS08090	0.11	-1.4
1,815,950	-		LRK53_RS08090	0.11	-0.4
1,815,950	-		LRK53_RS08090	0.11	-1.6
1,815,950	-		LRK53_RS08090	0.11	-0.9
1,816,030	+		LRK53_RS08090	0.13	-1.6
1,816,036	+		LRK53_RS08090	0.13	-1.4
1,816,036	+		LRK53_RS08090	0.13	+1.9
1,816,037	-		LRK53_RS08090	0.14	-1.4
1,816,037	-		LRK53_RS08090	0.14	-1.3
1,816,037	-		LRK53_RS08090	0.14	-0.1
1,816,037	-		LRK53_RS08090	0.14	-1.4
1,816,037	-		LRK53_RS08090	0.14	-1.8
1,816,037	-		LRK53_RS08090	0.14	+0.9
1,816,585	+		LRK53_RS08090	0.31	+0.5
1,816,585	+		LRK53_RS08090	0.31	-1.0
1,816,585	+		LRK53_RS08090	0.31	-1.1
1,816,585	+		LRK53_RS08090	0.31	+1.2
1,816,585	+		LRK53_RS08090	0.31	+0.6
1,816,602	+		LRK53_RS08090	0.32	-1.7
1,816,603	-		LRK53_RS08090	0.32	+1.9